Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p007082 Quercus lobata HOM05D005338 ORTHO05D006550 3.3e-113 411.8 217 100.0
Actinidia15288 Actinidia chinensis HOM05D005338 ORTHO05D006550 9.4e-108 393.7 217 93.5
CiPaw.15G069200 Carya illinoinensis HOM05D005338 ORTHO05D006550 1.2e-107 393.3 217 93.1
Cfa002226 Carpinus fangiana HOM05D005338 ORTHO05D006550 2.1e-107 392.5 217 93.1
Cpa.g.sc337.5 Carica papaya HOM05D005338 ORTHO05D006550 3.0e-106 388.7 217 92.2
Cfa018461 Carpinus fangiana HOM05D005338 ORTHO05D006550 2.0e-105 386.0 215 92.6
Oeu012884.1 Olea europaea HOM05D005338 ORTHO05D006550 2.0e-105 386.0 217 92.2
CSS0015965 Camellia sinensis var. sinensis HOM05D005338 ORTHO05D006550 3.4e-105 385.2 217 89.4
Nn8g40744 Nelumbo nucifera HOM05D005338 ORTHO05D006550 3.4e-105 385.2 217 90.8
SGA_v2.0_scaffold4G02341 Striga asiatica HOM05D005338 ORTHO05D006550 2.2e-104 382.5 217 89.9
Duzib147G0908 Durio zibethinus HOM05D005338 ORTHO05D006550 2.8e-104 382.1 217 90.8
GSVIVG01009622001 Vitis vinifera HOM05D005338 ORTHO05D006550 3.7e-104 381.7 216 90.3
arahy.Tifrunner.gnm1.ann1.82M2ZV Arachis hypogaea HOM05D005338 ORTHO05D006550 4.8e-104 381.3 217 91.2
arahy.Tifrunner.gnm1.ann1.F09FAE Arachis hypogaea HOM05D005338 ORTHO05D006550 4.8e-104 381.3 217 91.2
arahy.Tifrunner.gnm1.ann1.N4382H Arachis hypogaea HOM05D005338 ORTHO05D006550 4.8e-104 381.3 217 91.2
arahy.Tifrunner.gnm1.ann1.VZ94AI Arachis hypogaea HOM05D005338 ORTHO05D006550 4.8e-104 381.3 217 91.2
Gohir.A11G203500 Gossypium hirsutum HOM05D005338 ORTHO05D006550 6.3e-104 380.9 217 90.8
Nitab4.5_0000154g0040 Nicotiana tabacum HOM05D005338 ORTHO05D006550 8.3e-104 380.6 217 87.6
Hma1.2p1_0471F.1_g159310 Hydrangea macrophylla HOM05D005338 ORTHO05D006550 1.1e-103 380.2 217 90.8
Nitab4.5_0003384g0030 Nicotiana tabacum HOM05D005338 ORTHO05D006550 1.1e-103 380.2 217 87.6
MSTRG.2958 Avicennia marina HOM05D005338 ORTHO05D006550 1.4e-103 379.8 217 88.9
Prupe.1G517500 Prunus persica HOM05D005338 ORTHO05D006550 1.4e-103 379.8 217 90.8
MBI01_g22964_MAGBIO Magnolia biondii HOM05D005338 ORTHO05D006550 2.4e-103 379.0 217 87.6
Prupe.1G518900 Prunus persica HOM05D005338 ORTHO05D006550 4.1e-103 378.3 217 90.8
Eucgr.F01508 Eucalyptus grandis HOM05D005338 ORTHO05D006550 7.0e-103 377.5 217 89.4
Gorai.003G040400 Gossypium raimondii HOM05D005338 ORTHO05D006550 7.0e-103 377.5 217 89.4
PGR083G0298 Punica granatum HOM05D005338 ORTHO05D006550 1.2e-102 376.7 217 88.9
VMungo1215G3044 Vigna mungo HOM05D005338 ORTHO05D006550 1.2e-102 376.7 217 88.5
Cc07_g04760 Coffea canephora HOM05D005338 ORTHO05D006550 1.6e-102 376.3 217 88.0
Gohir.D03G039200 Gossypium hirsutum HOM05D005338 ORTHO05D006550 1.6e-102 376.3 217 89.4
SalBow1G1006 Salvia bowleyana HOM05D000168 ORTHO05D006550 1.6e-102 376.3 217 89.9
Glyma.15G160500 Glycine max HOM05D005338 ORTHO05D006550 2.7e-102 375.6 217 87.6
Gohir.A02G128500 Gossypium hirsutum HOM05D005338 ORTHO05D006550 2.7e-102 375.6 217 88.9
VMungo1309G1758 Vigna mungo HOM05D005338 ORTHO05D006550 2.7e-102 375.6 217 89.9
Gorai.007G236400 Gossypium raimondii HOM05D005338 ORTHO05D006550 4.5e-102 374.8 211 90.0
Phvul.009G240644 Phaseolus vulgaris HOM05D005338 ORTHO05D006550 4.5e-102 374.8 217 89.9
ClCG08G015430 Citrullus lanatus HOM05D005338 ORTHO05D006550 5.9e-102 374.4 217 86.6
CsaV3_2G028360 Cucumis sativus L. HOM05D005338 ORTHO05D006550 5.9e-102 374.4 217 86.6
Migut.H00565 Erythranthe guttata HOM05D005338 ORTHO05D006550 7.7e-102 374.0 217 86.2
Ciclev10026443m.g Citrus clementina HOM05D005338 ORTHO05D006550 1.0e-101 373.6 211 89.6
CAN.G162.113 Capsicum annuum HOM05D005338 ORTHO05D006550 1.7e-101 372.9 215 87.0
Glyma.09G054300 Glycine max HOM05D005338 ORTHO05D006550 1.7e-101 372.9 217 87.1
THA.LOC104824882 Tarenaya hassleriana HOM05D005338 ORTHO05D006550 2.2e-101 372.5 217 87.1
Medtr2g438770 Medicago truncatula HOM05D005338 ORTHO05D006550 3.8e-101 371.7 217 86.6
Sed0010775 Sechium edule HOM05D005338 ORTHO05D006550 3.8e-101 371.7 217 85.7
CANSAT25G1955 Cannabis sativa HOM05D005338 ORTHO05D006550 6.5e-101 370.9 217 87.1
RcHm_v2.0_Chr5g0038311 Rosa chinensis HOM05D005338 ORTHO05D006550 6.5e-101 370.9 217 88.5
CANSAT56G3114 Cannabis sativa HOM05D005338 ORTHO05D006550 1.1e-100 370.2 217 87.6
COL.COLO4_27273 Corchorus olitorius HOM05D005338 ORTHO05D006550 1.1e-100 370.2 217 88.5
EL10Ac3g06218 Beta vulgaris HOM05D005338 ORTHO05D006550 1.5e-100 369.8 217 86.6
Lj4g0021487 Lotus japonicus HOM05D005338 ORTHO05D006550 1.5e-100 369.8 217 88.9
Manes.13G095300 Manihot esculenta HOM05D005338 ORTHO05D006550 1.5e-100 369.8 219 89.0
TWI74G1059 Tripterygium wilfordii HOM05D005338 ORTHO05D006550 1.5e-100 369.8 217 85.7
vmacro21598 Vaccinium macrocarpon HOM05D005338 ORTHO05D006550 3.2e-100 368.6 206 92.2
Thecc.01G098200 Theobroma cacao HOM05D005338 ORTHO05D006550 5.5e-100 367.9 217 88.0
Glyma.18G135700 Glycine max HOM05D005338 ORTHO05D006550 1.2e-99 366.7 217 87.1
Solyc06g008010.3 Solanum lycopersicum HOM05D005338 ORTHO05D006550 1.2e-99 366.7 215 85.6
PGSC0003DMG400014704 Solanum tuberosum HOM05D005338 ORTHO05D006550 1.2e-99 366.7 215 85.6
FvH4_5g37300 Fragaria vesca HOM05D005338 ORTHO05D006550 1.6e-99 366.3 217 86.6
Sopen06g002850 Solanum pennellii HOM05D005338 ORTHO05D006550 2.7e-99 365.5 215 85.1
FAN08G1597 Fragaria x ananassa HOM05D005338 ORTHO05D006550 4.7e-99 364.8 217 86.2
Lalb_Chr15g0083931 Lupinus albus HOM05D005338 ORTHO05D006550 8.0e-99 364.0 211 86.7
AT2G22370 Arabidopsis thaliana HOM05D005338 ORTHO05D006550 1.4e-98 363.2 217 83.9
CARHR113580 Cardamine hirsuta HOM05D005338 ORTHO05D006550 1.8e-98 362.8 217 82.9
DCAR_003287 Daucus carota HOM05D005338 ORTHO05D006550 2.3e-98 362.5 217 85.7
Thhalv10000318m.g Eutrema salsugineum HOM05D005338 ORTHO05D006550 6.8e-98 360.9 217 83.9
FAN04G2403 Fragaria x ananassa HOM05D005338 ORTHO05D006550 8.8e-98 360.5 214 85.0
AL4G11870 Arabidopsis lyrata HOM05D005338 ORTHO05D006550 1.5e-97 359.8 217 83.4
Gohir.D11G220100 Gossypium hirsutum HOM05D005338 ORTHO05D006550 1.5e-97 359.8 208 89.4
Psat1g148520 Pisum sativum HOM05D005338 ORTHO05D006550 4.4e-97 358.2 223 81.6
Haze_25403 Corylus avellana HOM05D005338 ORTHO05D006550 7.5e-97 357.5 293 69.6
Potri.007G095300 Populus trichocarpa HOM05D005338 ORTHO05D006550 2.2e-96 355.9 217 86.2
Carub.0004s0155 Capsella rubella HOM05D005338 ORTHO05D006550 4.9e-96 354.8 217 82.5
Peaxi162Scf00479g00910 Petunia axillaris HOM05D005338 ORTHO05D006550 4.9e-96 354.8 205 87.3
ECA247G2066 Erigeron canadensis HOM05D005338 ORTHO05D006550 8.3e-96 354.0 219 82.6
Aqoxy6G01960 Aquilegia oxysepala HOM05D005338 ORTHO05D006550 1.4e-95 353.2 217 81.1
FAN13G0739 Fragaria x ananassa HOM05D005338 ORTHO05D006550 1.8e-95 352.8 203 87.2
HanXRQChr04g0104391 Helianthus annuus HOM05D005338 ORTHO05D006550 2.4e-95 352.4 220 81.4
Hund12454 Selenicereus undatus HOM05D005338 ORTHO05D006550 2.4e-95 352.4 206 86.9
PSO017G6030 Papaver somniferum HOM05D005338 ORTHO05D006550 3.1e-95 352.1 217 80.6
FAN18G4080 Fragaria x ananassa HOM05D005338 ORTHO05D006550 7.0e-95 350.9 202 87.1
Lsat_1_v5_gn_1_19481 Lactuca sativa HOM05D005338 ORTHO05D006550 7.0e-95 350.9 206 87.4
TPR.G29215 Trifolium pratense HOM05D005338 ORTHO05D006550 1.6e-94 349.7 206 85.9
Medtr5g044730 Medicago truncatula HOM05D005338 ORTHO05D006550 2.0e-94 349.4 206 85.4
Aqoxy1G02678 Aquilegia oxysepala HOM05D005338 ORTHO05D006550 4.5e-94 348.2 217 79.7
BcaC02g08666 Brassica carinata HOM05D005338 ORTHO05D006550 4.5e-94 348.2 218 82.1
A04p16850 Brassica napus HOM05D005338 ORTHO05D006550 7.7e-94 347.4 218 82.1
BraA04t17318Z Brassica rapa HOM05D005338 ORTHO05D006550 7.7e-94 347.4 218 82.1
BcaC02g08711 Brassica carinata HOM05D005338 ORTHO05D006550 1.0e-93 347.1 218 82.1
C04p51430 Brassica napus HOM05D005338 ORTHO05D006550 1.0e-93 347.1 218 82.1
MD15G1369800 Malus domestica HOM05D005338 ORTHO05D006550 1.7e-93 346.3 220 82.7
PSO170G4003 Papaver somniferum HOM05D005338 ORTHO05D006550 5.0e-93 344.7 217 79.7
BolC4t26735H Brassica oleracea HOM05D005338 ORTHO05D006550 8.6e-93 344.0 218 81.7
unitig_744.g23988 Utricularia gibba HOM05D005338 ORTHO05D006550 4.3e-92 341.7 215 83.3
CDE07G0352 Ceratophyllum demersum HOM05D005338 ORTHO05D006550 1.0e-90 337.0 196 87.2
Sabra07G0078500 Salix brachista HOM05D005338 ORTHO05D006550 1.0e-90 337.0 210 82.4
ATR0767G114 Amborella trichopoda HOM05D005338 ORTHO05D006550 2.6e-89 332.4 217 77.4
Sopen03g010490 Solanum pennellii HOM05D005338 ORTHO05D006550 4.4e-89 331.6 215 77.7
Zm00001eb236490 Zea mays HOM05D005338 ORTHO05D006550 7.5e-89 330.9 217 77.9
Sopen03g021660 Solanum pennellii HOM05D005338 ORTHO05D006550 1.3e-88 330.1 215 77.2
Aa31LG7G14440 Aethionema arabicum HOM05D005338 ORTHO05D006550 2.9e-88 328.9 276 64.1
Sp4g01410 Schrenkiella parvula HOM05D005338 ORTHO05D006550 3.7e-88 328.6 217 77.0
Os02g0193900 Oryza sativa ssp. japonica HOM05D005338 ORTHO05D006550 6.4e-88 327.8 203 78.8
Sopen03g021630 Solanum pennellii HOM05D005338 ORTHO05D006550 8.3e-88 327.4 215 76.7
Dinv36026 Davidia involucrata HOM05D005338 ORTHO05D006550 2.0e-86 322.8 215 78.6
HPP92_021909 Vanilla planifolia HOM05D005338 ORTHO05D006550 2.7e-86 322.4 211 74.4
CAN.G176.23 Capsicum annuum HOM05D005338 ORTHO05D006550 3.4e-81 305.4 185 83.8
Rhsim06G0038600 Rhododendron simsii HOM05D005338 ORTHO05D006550 1.7e-80 303.1 185 85.9
Ca_02026_v3 Cicer arietinum L. HOM05D005338 ORTHO05D006550 1.2e-78 297.0 164 90.9
MELO3C010912.2 Cucumis melo HOM05D005338 ORTHO05D006550 4.6e-78 295.0 173 86.1
Lj4A782T79 Lonicera japonica HOM05D005338 ORTHO05D006550 4.6e-78 295.0 173 85.5
SHI19279 Sapria himalayana HOM05D005338 ORTHO05D006550 4.3e-76 288.5 201 75.1
Pp3c14_750 Physcomitrium patens HOM05D005338 ORTHO05D006550 2.2e-72 276.2 219 59.8
Mapoly0023s0045 Marchantia polymorpha HOM05D005338 ORTHO05D006550 1.4e-71 273.5 210 63.8
SalBow1G1231 Salvia bowleyana HOM05D005338 ORTHO05D006550 1.0e-69 267.3 217 71.0
SMO236G0045 Selaginella moellendorffii HOM05D005338 ORTHO05D006550 2.1e-67 259.6 210 61.9
TAR628G0003 Trochodendron aralioides HOM05D005338 ORTHO05D006550 3.5e-62 242.3 144 85.4
AagrBONN_evm.TU.Sc2ySwM_362.1720 Anthoceros agrestis HOM05D005338 ORTHO05D006550 6.6e-61 238.0 210 57.6
AUR62040070 Chenopodium quinoa HOM05D005338 ORTHO05D006550 6.6e-61 238.0 139 84.2
Solyc03g046360.3 Solanum lycopersicum HOM05D005338 ORTHO05D006550 1.1e-58 230.7 212 59.9
Sc15g0006680 Simmondsia chinensis HOM05D005338 ORTHO05D006550 1.5e-57 226.9 144 81.2
RcHm_v2.0_Chr7g0238911 Rosa chinensis HOM05D005338 ORTHO05D006550 3.4e-57 225.7 175 70.9
Hma1.2p1_0023F.1_g015170 Hydrangea macrophylla HOM05D005338 ORTHO05D006550 5.1e-53 211.8 148 77.7
RcHm_v2.0_Chr5g0034471 Rosa chinensis HOM05D005338 ORTHO05D006550 1.5e-49 200.3 119 85.7
Sopen00g011030 Solanum pennellii HOM05D005338 ORTHO05D006550 2.6e-49 199.5 215 53.5
RcHm_v2.0_Chr7g0238871 Rosa chinensis HOM05D005338 ORTHO05D006550 2.2e-48 196.4 110 85.5
Sopen00g003620 Solanum pennellii HOM05D005338 ORTHO05D006550 7.9e-46 188.0 174 58.6
SMO236G0041 Selaginella moellendorffii HOM05D005338 ORTHO05D006550 6.2e-43 178.3 162 56.8
Sopen03g021680 Solanum pennellii HOM05D005338 ORTHO05D006550 7.9e-38 161.4 215 47.0
RcHm_v2.0_Chr7g0238881 Rosa chinensis HOM05D005338 ORTHO05D006550 4.5e-33 145.6 90 85.6
TPR.G5804 Trifolium pratense HOM05D005338 ORTHO05D006550 3.8e-32 142.5 83 88.0
Atru.chr1.3597 Acer truncatum HOM05D005338 ORTHO05D006550 7.6e-25 118.2 80 80.0
BcaC04g23293 Brassica carinata HOM05D005338 ORTHO05D006550 4.1e-18 95.9 56 80.4
TAR628G1182 Trochodendron aralioides HOM05D005338 ORTHO05D006550 2.9e-16 89.7 46 91.3
SEGI_27973 Sequoiadendron giganteum HOM05D005338 ORTHO05D006550 3.8e-16 89.4 53 75.5
Atru.chr12.488 Acer truncatum HOM05D005338 ORTHO05D006550 1.4e-15 87.4 45 91.1
BraA09t41155Z Brassica rapa HOM05D005338 ORTHO05D006550 5.1e-13 79.0 65 64.6
MD08G1183200 Malus domestica HOM05D005338 ORTHO05D006550 2.0e-12 77.0 99 49.5
C08p40830 Brassica napus HOM05D005338 ORTHO05D006550 1.9e-07 60.5 34 85.3
BolC8t51648H Brassica oleracea HOM05D005338 ORTHO05D006550 5.5e-07 58.9 34 85.3
Lj4A782T80 Lonicera japonica HOM05D005338 ORTHO05D234559 6.1e-06 55.5 33 97.0


User provided reference genes

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