Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p017754 Quercus lobata HOM05D005815 ORTHO05D007023 1.0e-90 336.7 159 100.0
CiPaw.13G152800 Carya illinoinensis HOM05D005815 ORTHO05D007023 1.3e-74 283.1 154 81.8
Potri.001G253700 Populus trichocarpa HOM05D005815 ORTHO05D007023 6.3e-69 264.2 154 76.0
Prupe.4G258500 Prunus persica HOM05D005815 ORTHO05D007023 8.3e-69 263.8 153 78.4
Dinv36194 Davidia involucrata HOM05D005815 ORTHO05D007023 1.1e-68 263.5 154 77.3
Dinv36196 Davidia involucrata HOM05D005815 ORTHO05D007023 1.4e-68 263.1 154 77.3
MD03G1169100 Malus domestica HOM05D005815 ORTHO05D007023 1.8e-68 262.7 153 77.1
TWI79G0828 Tripterygium wilfordii HOM05D005815 ORTHO05D007023 5.4e-68 261.2 156 76.9
Duzib150G1254 Durio zibethinus HOM05D005815 ORTHO05D007023 7.0e-68 260.8 155 73.5
Lj1A304T23 Lonicera japonica HOM05D005815 ORTHO05D007023 7.0e-68 260.8 154 75.3
Gohir.A13G217700 Gossypium hirsutum HOM05D005815 ORTHO05D007023 1.2e-67 260.0 154 76.0
Thecc.09G243800 Theobroma cacao HOM05D005815 ORTHO05D007023 1.2e-67 260.0 154 74.7
Gohir.D13G221350 Gossypium hirsutum HOM05D005815 ORTHO05D007023 1.6e-67 259.6 154 76.0
Gorai.013G252400 Gossypium raimondii HOM05D005815 ORTHO05D007023 1.6e-67 259.6 154 76.0
Ciclev10015899m.g Citrus clementina HOM05D005815 ORTHO05D007023 2.0e-67 259.2 156 75.6
Hma1.2p1_2660F.1_g326385 Hydrangea macrophylla HOM05D005815 ORTHO05D007023 2.0e-67 259.2 154 74.0
Hma1.2p1_2660F.1_g326395 Hydrangea macrophylla HOM05D005815 ORTHO05D007023 2.0e-67 259.2 154 74.0
GSVIVG01037233001 Vitis vinifera HOM05D005815 ORTHO05D007023 2.7e-67 258.8 156 74.4
CANSAT54G2776 Cannabis sativa HOM05D005815 ORTHO05D007023 3.5e-67 258.5 156 74.4
Potri.009G048000 Populus trichocarpa HOM05D005815 ORTHO05D007023 3.5e-67 258.5 154 76.6
RcHm_v2.0_Chr5g0050821 Rosa chinensis HOM05D005815 ORTHO05D007023 3.5e-67 258.5 153 75.2
CSS0034758 Camellia sinensis var. sinensis HOM05D005815 ORTHO05D007023 5.9e-67 257.7 154 73.4
Sc26g0004090 Simmondsia chinensis HOM05D005815 ORTHO05D007023 5.9e-67 257.7 154 73.4
Sabra16G0154400 Salix brachista HOM05D005815 ORTHO05D007023 7.7e-67 257.3 154 74.7
CSS0042266 Camellia sinensis var. sinensis HOM05D005815 ORTHO05D007023 1.7e-66 256.1 154 72.7
FvH4_3g28130 Fragaria vesca HOM05D005815 ORTHO05D007023 2.9e-66 255.4 153 75.2
Cpa.g.sc84.16 Carica papaya HOM05D005815 ORTHO05D007023 3.8e-66 255.0 155 72.3
FAN11G0714 Fragaria x ananassa HOM05D005815 ORTHO05D007023 1.1e-65 253.4 153 74.5
Manes.02G142200 Manihot esculenta HOM05D005815 ORTHO05D007023 1.5e-65 253.1 153 74.5
Nitab4.5_0009172g0020 Nicotiana tabacum HOM05D005815 ORTHO05D007023 2.5e-65 252.3 158 70.3
Sed0013061 Sechium edule HOM05D005815 ORTHO05D007023 3.2e-65 251.9 154 71.4
Peaxi162Scf00050g01211 Petunia axillaris HOM05D005815 ORTHO05D007023 4.2e-65 251.5 154 72.7
CAN.G379.23 Capsicum annuum HOM05D005815 ORTHO05D007023 5.5e-65 251.1 154 72.1
TAR369G0618 Trochodendron aralioides HOM05D005815 ORTHO05D007023 7.2e-65 250.8 154 74.0
Nitab4.5_0000718g0060 Nicotiana tabacum HOM05D005815 ORTHO05D007023 9.4e-65 250.4 153 72.5
Solyc01g008930.4 Solanum lycopersicum HOM05D005815 ORTHO05D007023 1.2e-64 250.0 154 72.1
Sopen01g004420 Solanum pennellii HOM05D005815 ORTHO05D007023 1.2e-64 250.0 154 72.1
Actinidia16359 Actinidia chinensis HOM05D005815 ORTHO05D007023 1.6e-64 249.6 154 72.7
Cc01_g05830 Coffea canephora HOM05D005815 ORTHO05D007023 2.1e-64 249.2 154 70.8
COL.COLO4_07231 Corchorus olitorius HOM05D005815 ORTHO05D007023 2.1e-64 249.2 154 70.8
DCAR_023769 Daucus carota HOM05D005815 ORTHO05D007023 3.6e-64 248.4 154 70.1
ClCG03G012900 Citrullus lanatus HOM05D005815 ORTHO05D007023 4.7e-64 248.1 154 71.4
Atru.chr3.3156 Acer truncatum HOM05D005815 ORTHO05D007023 6.1e-64 247.7 157 70.7
Aqoxy2G00303 Aquilegia oxysepala HOM05D005815 ORTHO05D007023 1.0e-63 246.9 154 70.8
CsaV3_1G043160 Cucumis sativus L. HOM05D005815 ORTHO05D007023 2.3e-63 245.7 154 70.8
AUR62012030 Chenopodium quinoa HOM05D005815 ORTHO05D007023 4.0e-63 245.0 153 69.9
ECA240G4129 Erigeron canadensis HOM05D000005 ORTHO05D000012 4.0e-63 245.0 154 70.8
Atru.chr3.2823 Acer truncatum HOM05D005815 ORTHO05D007023 6.8e-63 244.2 154 70.1
PGSC0003DMG401022694 Solanum tuberosum HOM05D005815 ORTHO05D007023 8.8e-63 243.8 154 70.1
EL10Ac3g06915 Beta vulgaris HOM05D005815 ORTHO05D007023 1.5e-62 243.0 153 69.3
AUR62015366 Chenopodium quinoa HOM05D005815 ORTHO05D007023 1.5e-62 243.0 153 69.9
HanXRQChr03g0090721 Helianthus annuus HOM05D005815 ORTHO05D007023 2.0e-62 242.7 154 69.5
Thhalv10011657m.g Eutrema salsugineum HOM05D005815 ORTHO05D007023 2.6e-62 242.3 154 64.9
C03p43800 Brassica napus HOM05D005815 ORTHO05D007023 5.7e-62 241.1 154 66.2
Migut.N02363 Erythranthe guttata HOM05D005815 ORTHO05D007023 7.5e-62 240.7 154 66.2
THA.LOC104799118 Tarenaya hassleriana HOM05D005815 ORTHO05D007023 7.5e-62 240.7 154 65.6
CARHR083510 Cardamine hirsuta HOM05D005815 ORTHO05D007023 1.7e-61 239.6 154 66.9
Ca_06446_v3 Cicer arietinum L. HOM05D005815 ORTHO05D007023 2.2e-61 239.2 152 69.7
A03p36140 Brassica napus HOM05D005815 ORTHO05D007023 2.8e-61 238.8 154 64.9
PSO384G1390 Papaver somniferum HOM05D005815 ORTHO05D007023 2.8e-61 238.8 155 67.1
PGR119G0840 Punica granatum HOM05D005815 ORTHO05D007023 2.8e-61 238.8 154 68.8
Eucgr.J00724 Eucalyptus grandis HOM05D005815 ORTHO05D007023 3.7e-61 238.4 154 67.5
BcaC01g04214 Brassica carinata HOM05D005815 ORTHO05D007023 6.3e-61 237.7 154 65.6
Phvul.008G284200 Phaseolus vulgaris HOM05D005815 ORTHO05D007023 8.3e-61 237.3 154 67.5
PSO339G6039 Papaver somniferum HOM05D005815 ORTHO05D007023 1.1e-60 236.9 155 67.1
BcaB04g18547 Brassica carinata HOM05D005815 ORTHO05D007023 1.4e-60 236.5 154 64.9
Rhsim13G0216400 Rhododendron simsii HOM05D005815 ORTHO05D007023 1.8e-60 236.1 179 60.9
arahy.Tifrunner.gnm1.ann1.CPT0CW Arachis hypogaea HOM05D005815 ORTHO05D007023 2.4e-60 235.7 155 68.4
MSTRG.17626 Avicennia marina HOM05D005815 ORTHO05D007023 2.4e-60 235.7 157 63.7
LjContig00081g0007858 Lotus japonicus HOM05D005815 ORTHO05D007023 2.4e-60 235.7 155 67.1
Aa31LG3G1660 Aethionema arabicum HOM05D005815 ORTHO05D007023 4.1e-60 235.0 154 64.3
arahy.Tifrunner.gnm1.ann1.VEUG4Z Arachis hypogaea HOM05D005815 ORTHO05D007023 7.0e-60 234.2 156 67.3
Sp3g07570 Schrenkiella parvula HOM05D005815 ORTHO05D007023 7.0e-60 234.2 154 63.0
AL3G20230 Arabidopsis lyrata HOM05D005815 ORTHO05D007023 1.2e-59 233.4 154 63.6
CDE04G3352 Ceratophyllum demersum HOM05D005815 ORTHO05D007023 1.2e-59 233.4 153 66.0
Carub.0003s0829 Capsella rubella HOM05D005815 ORTHO05D007023 1.6e-59 233.0 154 63.6
Glyma.02G304700 Glycine max HOM05D005815 ORTHO05D007023 1.6e-59 233.0 153 66.0
Lalb_Chr04g0247551 Lupinus albus HOM05D005815 ORTHO05D007023 1.6e-59 233.0 153 68.0
SGA_v2.0_scaffold271G46330 Striga asiatica HOM05D005815 ORTHO05D007023 2.7e-59 232.3 172 61.0
Lalb_Chr04g0247351 Lupinus albus HOM05D005815 ORTHO05D007023 3.5e-59 231.9 152 67.8
Lsat_1_v5_gn_3_113801 Lactuca sativa HOM05D005815 ORTHO05D007023 7.7e-59 230.7 154 67.5
Medtr5g097080 Medicago truncatula HOM05D005815 ORTHO05D007023 1.0e-58 230.3 152 67.8
TPR.G1255 Trifolium pratense HOM05D005815 ORTHO05D007023 1.0e-58 230.3 152 67.1
A05p39740 Brassica napus HOM05D005815 ORTHO05D007023 1.3e-58 229.9 154 62.3
BraA05t22757Z Brassica rapa HOM05D005815 ORTHO05D007023 1.3e-58 229.9 154 62.3
BcaC05g29644 Brassica carinata HOM05D005815 ORTHO05D007023 1.7e-58 229.6 154 62.3
BolC5t34532H Brassica oleracea HOM05D005815 ORTHO05D007023 2.9e-58 228.8 154 62.3
Hma1.2p1_1115F.1_g258840 Hydrangea macrophylla HOM05D005815 ORTHO05D007023 3.8e-58 228.4 174 62.1
AT3G09150 Arabidopsis thaliana HOM05D005815 ORTHO05D007023 6.6e-58 227.6 154 61.7
C05p58790 Brassica napus HOM05D005815 ORTHO05D007023 8.6e-58 227.3 154 61.7
Glyma.14G009100 Glycine max HOM05D005815 ORTHO05D007023 1.5e-57 226.5 150 66.7
ATR0721G178 Amborella trichopoda HOM05D005815 ORTHO05D007023 4.2e-57 224.9 154 64.3
unitig_21.g20897 Utricularia gibba HOM05D005815 ORTHO05D007023 1.6e-56 223.0 155 61.3
arahy.Tifrunner.gnm1.ann1.9N81UM Arachis hypogaea HOM05D005815 ORTHO05D007023 6.1e-56 221.1 148 67.6
Nn2g14945 Nelumbo nucifera HOM05D005815 ORTHO05D007023 2.3e-55 219.2 153 65.4
AUR62040930 Chenopodium quinoa HOM05D005815 ORTHO05D007023 2.0e-54 216.1 153 65.4
Zm00001eb363080 Zea mays HOM05D005815 ORTHO05D007023 1.3e-53 213.4 154 61.0
BraA03t12785Z Brassica rapa HOM05D005815 ORTHO05D007023 8.6e-50 200.7 134 62.7
BolC3t16647H Brassica oleracea HOM05D001932 ORTHO05D007023 5.6e-49 198.0 130 63.8
SMO353G0322 Selaginella moellendorffii HOM05D005815 ORTHO05D007023 2.2e-45 186.0 153 53.6
Mapoly0015s0102 Marchantia polymorpha HOM05D005815 ORTHO05D007023 1.4e-44 183.3 152 53.3
FAN21G0849 Fragaria x ananassa HOM05D005815 ORTHO05D007023 7.0e-44 181.0 111 73.0
AagrBONN_evm.TU.Sc2ySwM_344.3747 Anthoceros agrestis HOM05D005815 ORTHO05D007023 1.2e-43 180.3 153 51.6
FAN16G3704 Fragaria x ananassa HOM05D005815 ORTHO05D007023 1.2e-43 180.3 111 73.0
FAN25G3713 Fragaria x ananassa HOM05D005815 ORTHO05D007023 1.2e-43 180.3 114 72.8
Hund08152 Selenicereus undatus HOM05D005815 ORTHO05D007023 1.0e-42 177.2 115 67.8
Pp3c13_10580 Physcomitrium patens HOM05D005815 ORTHO05D007023 3.9e-42 175.3 152 50.7
arahy.Tifrunner.gnm1.ann1.GN5QKJ Arachis hypogaea HOM05D005815 ORTHO05D007023 1.9e-41 172.9 148 58.1
MELO3C029500.2 Cucumis melo HOM05D005815 ORTHO05D007023 4.7e-40 168.3 107 70.1
Psat2g004880 Pisum sativum HOM05D005815 ORTHO05D007023 3.9e-34 148.7 94 71.3
HanXRQChr09g0261041 Helianthus annuus HOM05D005815 ORTHO05D007023 6.2e-32 141.4 112 58.9
CBR_g29537 Chara braunii HOM05D005815 ORTHO05D007023 5.2e-31 138.3 152 39.5
SEGI_10447 Sequoiadendron giganteum HOM05D005815 ORTHO05D007023 9.9e-30 134.0 97 58.8
arahy.Tifrunner.gnm1.ann1.1FY4ZR Arachis hypogaea HOM05D004738 ORTHO05D007023 1.3e-29 133.7 96 65.6
vmacro04006 Vaccinium macrocarpon HOM05D005815 ORTHO05D007023 2.9e-29 132.5 74 74.3
Duzib150G0890 Durio zibethinus HOM05D005815 ORTHO05D007023 2.4e-28 129.4 80 70.0
arahy.Tifrunner.gnm1.ann1.24D4KD Arachis hypogaea HOM05D005815 ORTHO05D007023 4.1e-28 128.6 94 63.8
Nn2g15997 Nelumbo nucifera HOM05D005815 ORTHO05D007023 3.0e-26 122.5 146 46.6
Nn2g14749 Nelumbo nucifera HOM05D005815 ORTHO05D007023 3.9e-26 122.1 147 48.3
Eucgr.G00241 Eucalyptus grandis HOM05D005815 ORTHO05D007023 2.6e-22 109.4 130 45.4
Eucgr.G00240 Eucalyptus grandis HOM05D005815 ORTHO05D007023 7.6e-22 107.8 131 45.0
AL3G20260 Arabidopsis lyrata HOM05D005815 ORTHO05D007023 6.4e-21 104.8 76 57.9
Ah.04g152490 Amaranthus hybridus HOM05D005815 ORTHO05D007023 2.3e-18 96.3 77 55.8
Eucgr.G00239 Eucalyptus grandis HOM05D005815 ORTHO05D007023 4.0e-15 85.5 81 50.6
vmacro04007 Vaccinium macrocarpon HOM05D005815 ORTHO05D007023 2.9e-13 79.3 46 71.7
VMungo0647G0340 Vigna mungo HOM05D005815 ORTHO05D007023 6.4e-13 78.2 75 52.0


User provided reference genes

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