Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p006663 Quercus lobata HOM05D067426 ORTHO05D001773 1.2e-103 380.2 238 100.0
QL02p015488 Quercus lobata HOM05D067426 ORTHO05D001773 4.7e-28 129.0 74 89.2
MELO3C000923.2 Cucumis melo HOM05D000995 ORTHO05D002620 3.4e-18 96.3 138 33.3
MELO3C000149.2 Cucumis melo HOM05D000995 ORTHO05D000638 1.3e-17 94.4 138 34.1
MELO3C000787.2 Cucumis melo HOM05D000995 ORTHO05D001773 1.3e-17 94.4 138 33.3
MELO3C027312.2 Cucumis melo HOM05D000995 ORTHO05D001773 6.4e-17 92.0 138 32.6
ClCG02G008620 Citrullus lanatus HOM05D000995 ORTHO05D001773 1.4e-16 90.9 123 37.4
ClCG01G009740 Citrullus lanatus HOM05D000995 ORTHO05D000638 1.9e-16 90.5 123 36.6
MELO3C026674.2 Cucumis melo HOM05D000995 ORTHO05D001773 2.4e-16 90.1 138 31.9
MELO3C029552.2 Cucumis melo HOM05D000995 ORTHO05D000638 2.4e-16 90.1 138 31.2
Nitab4.5_0000199g0110 Nicotiana tabacum HOM05D000995 ORTHO05D010997 2.4e-16 90.1 126 36.5
MELO3C000457.2 Cucumis melo HOM05D000995 ORTHO05D000638 3.2e-16 89.7 123 35.0
MELO3C027383.2 Cucumis melo HOM05D000995 ORTHO05D001773 3.2e-16 89.7 138 31.2
Hma1.2p1_1193F.1_g265550 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 4.2e-16 89.4 123 35.8
MELO3C014207.2 Cucumis melo HOM05D000995 ORTHO05D000638 5.4e-16 89.0 138 33.3
MELO3C027512.2 Cucumis melo HOM05D000995 ORTHO05D000638 9.3e-16 88.2 123 34.1
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 1.6e-15 87.4 128 33.6
ClCG01G016350 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.1e-15 87.0 123 35.8
ClCG11G011320 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.1e-15 87.0 123 35.8
PGSC0003DMG400009586 Solanum tuberosum HOM05D000995 ORTHO05D000638 2.1e-15 87.0 126 33.3
ClCG08G001070 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.7e-15 86.7 122 35.2
ClCG09G009920 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.7e-15 86.7 123 35.8
ClCG01G008830 Citrullus lanatus HOM05D000995 ORTHO05D000638 4.6e-15 85.9 123 35.8
Nitab4.5_0001057g0110 Nicotiana tabacum HOM05D003574 ORTHO05D010997 7.9e-15 85.1 123 35.8
Hma1.2p1_2783F.1_g328410 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 1.0e-14 84.7 123 35.8
PGSC0003DMG400040325 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.0e-14 84.7 128 33.6
ClCG09G014960 Citrullus lanatus HOM05D000995 ORTHO05D001773 1.8e-14 84.0 123 34.1
Hma1.2p1_0446F.1_g154720 Hydrangea macrophylla HOM05D000995 ORTHO05D000638 2.3e-14 83.6 123 33.3
Sed0018066 Sechium edule HOM05D000995 ORTHO05D000638 3.0e-14 83.2 141 33.3
Nitab4.5_0007583g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.9e-14 82.8 126 34.9
PGSC0003DMG400001285 Solanum tuberosum HOM05D000995 ORTHO05D000638 3.9e-14 82.8 128 34.4
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 5.1e-14 82.4 128 35.2
QL07p006782 Quercus lobata HOM05D000995 ORTHO05D002620 6.7e-14 82.0 129 36.4
Nitab4.5_0000032g0300 Nicotiana tabacum HOM05D000995 ORTHO05D010997 1.1e-13 81.3 138 33.3
ClCG06G010440 Citrullus lanatus HOM05D000995 ORTHO05D001773 1.9e-13 80.5 123 33.3
QL11p006726 Quercus lobata HOM05D000995 ORTHO05D001773 1.9e-13 80.5 126 38.9
CAN.G229.21 Capsicum annuum HOM05D000310 ORTHO05D000509 2.5e-13 80.1 131 33.6
Nitab4.5_0008368g0050 Nicotiana tabacum HOM05D003574 ORTHO05D001773 3.3e-13 79.7 126 34.9
Sed0007388 Sechium edule HOM05D000995 ORTHO05D000638 3.3e-13 79.7 139 31.7
QL02p003670 Quercus lobata HOM05D000995 ORTHO05D001773 4.3e-13 79.3 129 35.7
QL07p017318 Quercus lobata HOM05D000995 ORTHO05D001773 4.3e-13 79.3 129 35.7
QL02p080036 Quercus lobata HOM05D000995 ORTHO05D001773 5.6e-13 79.0 129 34.9
QL05p048948 Quercus lobata HOM05D000995 ORTHO05D001773 5.6e-13 79.0 129 34.9
QL06p019608 Quercus lobata HOM05D000995 ORTHO05D001773 5.6e-13 79.0 129 34.9
QL08p038287 Quercus lobata HOM05D000995 ORTHO05D001773 5.6e-13 79.0 129 34.9
QL93p0181_0012 Quercus lobata HOM05D000995 ORTHO05D001773 5.6e-13 79.0 129 34.9
QL93p0209_0006 Quercus lobata HOM05D000995 ORTHO05D001773 5.6e-13 79.0 129 34.9
Sed0017387 Sechium edule HOM05D000995 ORTHO05D001773 5.6e-13 79.0 139 31.7
ClCG08G006380 Citrullus lanatus HOM05D000995 ORTHO05D001773 7.4e-13 78.6 123 33.3
QL08p015694 Quercus lobata HOM05D000995 ORTHO05D001773 7.4e-13 78.6 129 37.2
QL10p026410 Quercus lobata HOM05D000995 ORTHO05D001773 7.4e-13 78.6 129 35.7
Sopen12g023050 Solanum pennellii HOM05D003574 ORTHO05D002175 9.6e-13 78.2 95 34.7
PGSC0003DMG400013728 Solanum tuberosum HOM05D000995 ORTHO05D001773 9.6e-13 78.2 128 34.4
Sed0014458 Sechium edule HOM05D000995 ORTHO05D012510 1.3e-12 77.8 141 32.6
ClCG11G010690 Citrullus lanatus HOM05D000995 ORTHO05D001773 1.6e-12 77.4 90 38.9
Sed0020039 Sechium edule HOM05D000995 ORTHO05D000638 1.6e-12 77.4 123 34.1
ClCG08G000680 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.8e-12 76.6 123 33.3
MSTRG.26045 Avicennia marina HOM05D000995 ORTHO05D000638 4.8e-12 75.9 123 36.6
Hma1.2p1_0494F.1_g165370 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 4.8e-12 75.9 85 41.2
PGSC0003DMG400038482 Solanum tuberosum HOM05D000995 ORTHO05D000638 1.1e-11 74.7 95 35.8
ClCG07G007890 Citrullus lanatus HOM05D000995 ORTHO05D001773 1.4e-11 74.3 123 33.3
Sed0008092 Sechium edule HOM05D000995 ORTHO05D001773 6.9e-11 72.0 111 32.4
QL04p030586 Quercus lobata HOM05D000995 ORTHO05D001773 9.0e-11 71.6 100 37.0
QL09p028511 Quercus lobata HOM05D000995 ORTHO05D001773 9.0e-11 71.6 100 37.0
QL10p017437 Quercus lobata HOM05D000995 ORTHO05D001773 9.0e-11 71.6 100 37.0
Sed0018372 Sechium edule HOM05D000995 ORTHO05D000638 9.0e-11 71.6 139 29.5
MELO3C029462.2 Cucumis melo HOM05D000995 ORTHO05D002620 1.2e-10 71.2 120 31.7
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-10 71.2 128 32.8
CAN.G624.18 Capsicum annuum HOM05D000995 ORTHO05D000638 2.6e-10 70.1 126 30.2
Rhsim01G0104900 Rhododendron simsii HOM05D000995 ORTHO05D001773 7.6e-10 68.6 145 35.2
Rhsim13G0131600 Rhododendron simsii HOM05D000995 ORTHO05D002620 1.0e-09 68.2 145 34.5
Rhsim01G0099100 Rhododendron simsii HOM05D000995 ORTHO05D001773 1.7e-09 67.4 145 33.1
Hund26451 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.7e-09 67.4 123 31.7
Rhsim01G0078000 Rhododendron simsii HOM05D000995 ORTHO05D001773 2.2e-09 67.0 145 33.8
Rhsim02G0098200 Rhododendron simsii HOM05D000995 ORTHO05D002620 2.9e-09 66.6 146 32.9
Hund30412 Selenicereus undatus HOM05D004781 ORTHO05D001773 2.9e-09 66.6 124 32.3
MELO3C034175.2 Cucumis melo HOM05D000995 ORTHO05D000638 4.9e-09 65.9 92 31.5
Rhsim08G0106900 Rhododendron simsii HOM05D000995 ORTHO05D002620 6.4e-09 65.5 145 33.8
Hund01802 Selenicereus undatus HOM05D004781 ORTHO05D001773 6.4e-09 65.5 124 32.3
MELO3C019586.2 Cucumis melo HOM05D000995 ORTHO05D000638 1.4e-08 64.3 69 43.5
Hund10681 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.4e-08 64.3 124 32.3
Hund13033 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.4e-08 64.3 124 32.3
Hund17483 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.4e-08 64.3 124 32.3
Hund29540 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.4e-08 64.3 124 32.3
Hund29568 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.4e-08 64.3 124 32.3
Hund29617 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.4e-08 64.3 124 32.3
Hund29800 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.4e-08 64.3 124 32.3
Nitab4.5_0000687g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-08 63.9 128 33.6
Hund26184 Selenicereus undatus HOM05D004781 ORTHO05D001773 2.5e-08 63.5 124 32.3
Rhsim08G0105700 Rhododendron simsii HOM05D000995 ORTHO05D000001 4.2e-08 62.8 113 35.4
Hund08788 Selenicereus undatus HOM05D004781 ORTHO05D001773 4.2e-08 62.8 123 30.1
Hund15627 Selenicereus undatus HOM05D004781 ORTHO05D001773 4.2e-08 62.8 124 31.5
Hma1.2p1_0120F.1_g057263 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 5.5e-08 62.4 74 41.9
Hma1.2p1_0663F.1_g198890 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 5.5e-08 62.4 74 41.9
Hund12343 Selenicereus undatus HOM05D004781 ORTHO05D001773 5.5e-08 62.4 109 31.2
Hund29812 Selenicereus undatus HOM05D004781 ORTHO05D001773 7.1e-08 62.0 124 31.5
Hund29749 Selenicereus undatus HOM05D004781 ORTHO05D001773 9.3e-08 61.6 123 30.1
MELO3C000447.2 Cucumis melo HOM05D000995 ORTHO05D000638 1.2e-07 61.2 69 42.0
Hund10446 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.2e-07 61.2 123 28.5
Hund24690 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.6e-07 60.8 123 28.5
ClCG01G008450 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.1e-07 60.5 123 29.3
Solyc04g048905.1 Solanum lycopersicum HOM05D000995 ORTHO05D001773 2.7e-07 60.1 70 37.1
PGSC0003DMG400020615 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.7e-07 60.1 80 33.8
AUR62036388 Chenopodium quinoa HOM05D000995 ORTHO05D000638 6.0e-07 58.9 105 33.3
Hund23885 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.3e-06 57.8 123 27.6
EL10Ac6g13855 Beta vulgaris HOM05D004781 ORTHO05D001773 1.8e-06 57.4 129 31.0
Nitab4.5_0010291g0010 Nicotiana tabacum HOM05D000995 ORTHO05D000638 1.8e-06 57.4 55 45.5
Hund04316 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.8e-06 57.4 108 30.6
Hund16293 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.8e-06 57.4 108 30.6
EL10Ac1g00951 Beta vulgaris HOM05D000995 ORTHO05D001773 2.3e-06 57.0 129 31.0
EL10Ac2g03521 Beta vulgaris HOM05D004781 ORTHO05D001773 2.3e-06 57.0 129 31.0
EL10Ac3g06382 Beta vulgaris HOM05D004781 ORTHO05D001773 2.3e-06 57.0 129 31.0
EL10Ac6g14812 Beta vulgaris HOM05D004781 ORTHO05D001773 2.3e-06 57.0 129 31.0
AUR62027594 Chenopodium quinoa HOM05D000995 ORTHO05D001773 2.3e-06 57.0 99 34.3
QL09p052387 Quercus lobata HOM05D046144 ORTHO05D337647 8.7e-06 55.1 29 82.8
Hund22959 Selenicereus undatus HOM05D008217 ORTHO05D010406 8.7e-06 55.1 138 29.7


User provided reference genes

Program Settings