Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 3.8e-104 381.7 222 100.0
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 7.2e-79 297.7 229 82.1
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 4.7e-78 295.0 222 76.6
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 1.8e-77 293.1 222 79.7
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 1.7e-64 250.0 221 70.1
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 8.5e-64 247.7 223 65.9
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 8.0e-62 241.1 223 64.1
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 4.1e-58 228.8 221 62.0
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 5.6e-55 218.4 216 61.6
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 6.1e-54 214.9 224 58.5
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 1.7e-51 206.8 218 56.9
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 1.3e-48 197.2 229 52.0
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 1.1e-47 194.1 229 50.2
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 4.3e-47 192.2 220 50.9
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 1.6e-46 190.3 225 48.9
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 1.6e-46 190.3 216 61.6
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 2.1e-46 189.9 225 51.6
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 4.7e-46 188.7 225 50.7
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 6.2e-46 188.3 222 49.1
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 1.0e-45 187.6 230 48.7
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 3.1e-45 186.0 226 50.9
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 1.2e-44 184.1 225 51.6
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 1.5e-44 183.7 222 49.5
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 4.4e-44 182.2 224 49.6
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 4.4e-44 182.2 224 49.6
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 5.8e-44 181.8 225 49.8
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 7.5e-44 181.4 225 53.3
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 7.5e-44 181.4 226 48.7
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 7.5e-44 181.4 220 49.5
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 9.8e-44 181.0 227 47.1
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 1.7e-43 180.3 229 48.0
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 3.7e-43 179.1 226 46.9
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 3.7e-43 179.1 225 48.0
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 8.3e-43 177.9 217 48.4
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 1.4e-42 177.2 225 50.2
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 2.4e-42 176.4 230 49.1
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 4.1e-42 175.6 220 47.3
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 4.1e-42 175.6 225 46.7
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 4.1e-42 175.6 230 44.8
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 5.4e-42 175.3 227 47.6
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 5.4e-42 175.3 227 48.0
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 7.0e-42 174.9 230 45.2
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.2e-41 174.1 224 46.9
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.2e-41 174.1 223 48.4
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 2.0e-41 173.3 231 50.2
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.7e-41 172.9 223 47.1
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 3.5e-41 172.6 229 48.9
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 6.0e-41 171.8 224 46.0
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.3e-40 169.9 225 45.8
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 3.0e-40 169.5 242 46.3
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 6.6e-40 168.3 157 58.0
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 6.6e-40 168.3 223 46.2
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 8.6e-40 167.9 222 45.9
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 1.1e-39 167.5 229 47.2
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 1.1e-39 167.5 230 47.8
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 2.1e-38 163.3 227 45.4
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 2.1e-38 163.3 220 44.5
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 8.1e-38 161.4 234 46.2
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 1.1e-37 161.0 224 45.5
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 2.3e-37 159.8 227 45.4
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 5.2e-37 158.7 224 45.5
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 5.2e-37 158.7 173 50.3
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 6.8e-37 158.3 224 50.4
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 6.8e-37 158.3 222 46.8
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 6.8e-37 158.3 224 45.1
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 8.9e-37 157.9 224 44.2
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 8.9e-37 157.9 225 45.8
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 4.4e-36 155.6 220 43.6
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 7.5e-36 154.8 225 48.0
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 6.4e-35 151.8 225 41.3
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 8.3e-35 151.4 228 42.5
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 1.4e-34 150.6 221 46.6
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 1.9e-34 150.2 223 42.6
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 6.0e-33 145.2 230 43.0
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 7.8e-33 144.8 225 41.3
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 1.3e-32 144.1 233 44.2
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 1.3e-32 144.1 224 40.6
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 1.7e-32 143.7 227 47.6
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 1.7e-32 143.7 168 54.2
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 3.0e-32 142.9 230 44.3
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 3.0e-32 142.9 225 40.4
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 6.6e-32 141.7 224 41.1
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 2.5e-31 139.8 184 47.8
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 3.3e-31 139.4 225 41.8
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 4.3e-31 139.0 223 51.1
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 1.6e-30 137.1 224 40.6
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 2.1e-30 136.7 232 43.5
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 2.8e-30 136.3 217 41.5
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 3.6e-30 136.0 180 44.4
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 2.3e-29 133.3 225 45.3
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 2.6e-28 129.8 127 56.7
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 2.6e-28 129.8 239 38.1
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 5.8e-28 128.6 226 40.3
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 1.7e-27 127.1 224 39.7
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 1.7e-27 127.1 129 52.7
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 2.9e-27 126.3 237 38.0
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 8.4e-27 124.8 231 43.3
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 2.7e-25 119.8 241 39.4
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 8.6e-24 114.8 225 33.3
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 2.1e-22 110.2 231 34.6
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 3.6e-22 109.4 231 34.6
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 3.6e-22 109.4 221 34.8
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 4.7e-22 109.0 182 39.6
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 8.1e-22 108.2 133 47.4
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 1.3e-19 100.9 126 47.6
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 2.7e-17 93.2 123 43.1
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 6.0e-17 92.0 118 44.1
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 7.6e-12 75.1 240 30.0
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 3.8e-11 72.8 53 62.3
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 5.4e-10 68.9 235 30.2
CDE06G0604 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 3.3e-07 59.7 116 36.2
BolC6t38885H Brassica oleracea HOM05D006456 ORTHO05D007588 8.1e-06 55.1 98 38.8
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 8.1e-06 55.1 87 35.6


User provided reference genes

Program Settings