Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 4.1e-262 908.3 773 100.0
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 2.5e-179 633.3 777 80.4
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 1.2e-178 630.9 775 79.2
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 9.1e-137 491.9 778 67.7
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 1.1e-102 378.6 774 63.0
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 7.5e-99 365.9 791 60.8
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 1.1e-94 352.1 772 57.3
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 9.5e-94 349.0 777 55.7
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.2e-93 348.6 777 55.0
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 1.2e-93 348.6 778 61.7
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.8e-92 344.7 791 59.0
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 6.8e-92 342.8 781 60.3
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.4e-89 335.1 778 50.9
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 4.1e-89 333.6 781 51.5
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 2.7e-88 330.9 779 55.8
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.0e-87 327.4 785 55.7
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 3.9e-87 327.0 786 51.3
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 6.2e-85 319.7 788 56.7
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 1.9e-81 308.1 785 55.9
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 3.5e-80 303.9 488 52.7
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 5.1e-79 300.1 785 56.2
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 2.3e-76 291.2 781 52.5
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 3.1e-76 290.8 781 54.4
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 4.9e-74 283.5 762 56.3
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 1.4e-73 282.0 777 51.5
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 5.4e-73 280.0 771 56.4
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 2.1e-72 278.1 487 55.0
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 2.3e-71 274.6 785 53.4
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 6.6e-71 273.1 742 55.1
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 6.6e-71 273.1 773 56.7
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 1.2e-69 268.9 490 54.1
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 5.2e-68 263.5 777 54.7
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 2.2e-66 258.1 490 52.7
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 3.8e-66 257.3 782 49.0
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 4.2e-65 253.8 734 51.0
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 5.4e-65 253.4 728 47.7
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 3.5e-64 250.8 744 41.4
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 4.6e-64 250.4 465 51.4
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 7.8e-64 249.6 463 50.5
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 2.3e-63 248.1 762 58.0
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 3.0e-63 247.7 486 50.0
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 3.0e-63 247.7 486 50.0
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 6.6e-63 246.5 485 45.8
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 6.6e-63 246.5 471 51.0
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 2.5e-62 244.6 770 56.9
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 5.6e-62 243.4 728 46.7
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 9.6e-62 242.7 765 52.2
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 1.4e-60 238.8 484 50.0
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 1.4e-60 238.8 487 52.6
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 5.3e-60 236.9 728 52.7
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 2.9e-58 231.1 761 54.3
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 8.4e-58 229.6 728 50.1
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 1.1e-57 229.2 784 48.5
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 1.1e-57 229.2 785 54.6
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 2.4e-57 228.0 784 53.4
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 2.4e-57 228.0 788 50.1
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 3.2e-57 227.6 786 44.7
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 6.0e-56 223.4 732 47.4
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 1.7e-55 221.9 782 45.4
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 3.9e-55 220.7 457 51.2
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 2.5e-54 218.0 486 44.7
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 3.3e-54 217.6 770 55.6
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 7.3e-54 216.5 426 52.3
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 1.3e-53 215.7 728 49.5
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 2.8e-53 214.5 738 54.5
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 4.8e-53 213.8 779 48.3
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 1.1e-49 202.6 488 47.7
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 1.6e-48 198.7 789 48.2
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 2.7e-48 198.0 370 55.9
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 6.7e-47 193.4 498 44.6
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 9.6e-46 189.5 729 53.6
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 1.6e-45 188.7 489 45.4
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 1.8e-44 185.3 761 48.8
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 1.5e-43 182.2 777 49.9
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 1.5e-43 182.2 790 51.4
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 7.6e-43 179.9 780 56.7
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 1.0e-42 179.5 735 53.6
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 2.5e-41 174.9 211 56.9
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 3.0e-39 167.9 485 44.1
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 5.1e-39 167.2 744 42.1
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 3.3e-38 164.5 487 45.8
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 1.6e-37 162.2 492 40.9
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 2.8e-37 161.4 776 48.2
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 7.6e-35 153.3 729 54.7
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 4.2e-33 147.5 783 44.7
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 1.8e-31 142.1 487 40.5
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 3.0e-31 141.4 769 50.7
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 3.3e-30 137.9 383 45.7
Glyma.14G115900 Glycine max HOM05D006421 ORTHO05D008268 5.7e-30 137.1 154 60.4
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 1.6e-29 135.6 498 39.6
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 2.4e-28 131.7 488 41.2
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 6.9e-28 130.2 156 50.6
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 6.9e-28 130.2 731 42.4
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 2.6e-27 128.3 384 45.1
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 1.1e-20 106.3 784 46.7
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 4.1e-20 104.4 783 43.3
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 1.3e-18 99.4 454 28.6
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 2.9e-18 98.2 734 46.3
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 2.9e-18 98.2 486 35.8
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 1.4e-17 95.9 488 34.8
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 7.2e-17 93.6 264 56.1
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 1.2e-16 92.8 264 32.6
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 8.8e-15 86.7 229 29.7
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 1.3e-13 82.8 485 38.4
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 1.8e-12 79.0 723 43.6
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 2.6e-11 75.1 160 41.2
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 4.5e-11 74.3 409 39.6
CDE07G0223 Ceratophyllum demersum HOM05D006421 ORTHO05D008268 5.9e-11 73.9 182 37.9
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 7.2e-09 67.0 506 31.6
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 9.4e-09 66.6 141 39.7
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.6e-08 65.9 53 69.8
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.4e-07 62.8 142 39.4
A03p32460 Brassica napus HOM05D003015 ORTHO05D024548 1.5e-06 59.3 139 38.8
BraA07t31256Z Brassica rapa HOM05D000793 ORTHO05D024548 2.6e-06 58.5 139 38.8
CDE06G1662 Ceratophyllum demersum HOM05D006421 ORTHO05D008268 2.6e-06 58.5 71 43.7
Sabra18G0029000 Salix brachista HOM05D006421 ORTHO05D008268 2.6e-06 58.5 140 32.1


User provided reference genes

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