Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 3.0e-136 488.4 232 100.0
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 4.8e-134 481.1 232 97.8
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 5.2e-112 407.9 232 80.2
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 4.8e-110 401.4 232 79.7
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 3.5e-108 395.2 232 80.2
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 7.2e-98 360.9 232 72.4
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 7.2e-98 360.9 232 72.4
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 8.8e-96 354.0 232 72.0
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.6e-95 352.4 273 62.6
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 3.5e-92 342.0 232 69.8
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 7.8e-92 340.9 232 69.4
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 3.8e-91 338.6 234 70.9
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 6.6e-91 337.8 233 69.5
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 6.6e-91 337.8 233 69.5
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 2.4e-85 319.3 235 66.4
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.2e-73 280.4 227 60.4
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 6.2e-73 278.1 227 58.1
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 8.1e-73 277.7 227 59.9
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 8.1e-73 277.7 227 59.9
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.4e-71 271.9 224 55.8
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.9e-70 269.2 226 54.9
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.4e-70 268.1 224 54.9
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.3e-70 267.7 224 55.4
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 2.4e-69 266.2 227 53.7
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 3.2e-69 265.8 227 53.3
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.4e-69 265.0 228 55.3
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.4e-69 265.0 231 54.1
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.2e-68 263.8 227 55.5
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 2.7e-68 262.7 227 52.9
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.5e-68 262.3 224 54.0
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.5e-68 262.3 231 55.4
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.6e-68 261.9 227 55.9
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 7.8e-68 261.2 217 60.4
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 7.8e-68 261.2 226 53.1
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.3e-67 259.6 226 53.1
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.0e-67 259.2 229 54.6
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 6.6e-67 258.1 220 55.5
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.6e-67 257.7 224 54.5
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.5e-66 256.9 208 59.1
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 1.9e-66 256.5 229 54.1
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 2.5e-66 256.1 229 53.7
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 5.6e-66 255.0 227 54.2
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 5.6e-66 255.0 227 53.7
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.8e-65 252.7 227 54.6
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 5.8e-63 245.0 227 53.3
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 7.6e-63 244.6 229 52.0
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.3e-62 243.8 224 51.3
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.4e-61 239.6 224 49.6
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.4e-61 239.6 207 53.6
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.2e-61 239.2 223 50.2
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 4.1e-61 238.8 220 53.6
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.5e-60 235.7 207 53.1
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 3.3e-58 229.2 233 49.8
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.3e-58 228.0 226 50.0
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 2.8e-57 226.1 234 48.7
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 2.8e-57 226.1 234 48.7
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 2.8e-57 226.1 234 48.7
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 8.1e-57 224.6 227 50.2
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 6.9e-56 221.5 227 48.9
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 2.2e-54 216.5 237 46.8
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 8.4e-54 214.5 233 46.8
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.1e-53 211.5 229 48.0
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 9.3e-53 211.1 233 45.9
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.0e-51 207.6 175 57.1
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 2.3e-51 206.5 241 44.0
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.9e-51 205.7 228 45.2
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 9.6e-50 201.1 188 56.4
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.1e-49 199.9 223 48.0
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 8.1e-49 198.0 224 47.3
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.4e-48 197.2 233 43.3
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 2.0e-47 193.4 236 43.2
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 5.8e-47 191.8 228 45.6
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 7.6e-47 191.4 228 43.4
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.3e-46 190.7 226 46.0
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.3e-46 190.7 226 46.0
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.9e-46 188.7 216 46.8
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 6.4e-46 188.3 225 44.0
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 6.4e-46 188.3 229 43.7
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 7.1e-45 184.9 146 60.3
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 2.1e-44 183.3 222 43.7
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 2.7e-44 183.0 223 43.9
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 1.0e-43 181.0 235 43.0
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 8.7e-43 177.9 223 42.2
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 1.1e-42 177.6 202 47.0
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 1.1e-42 177.6 226 42.0
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.9e-42 176.8 163 52.1
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 2.5e-42 176.4 224 41.1
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.6e-42 175.3 228 42.1
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 9.6e-42 174.5 224 42.9
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 3.7e-41 172.6 223 41.3
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-40 170.6 136 55.9
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 2.4e-40 169.9 226 41.2
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 4.0e-40 169.1 143 55.2
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 6.9e-40 168.3 127 59.8
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 9.0e-40 167.9 241 39.8
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 2.6e-39 166.4 201 44.3
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 2.6e-39 166.4 196 41.8
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 1.3e-38 164.1 231 40.3
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 1.7e-38 163.7 222 40.5
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 1.3e-35 154.1 229 39.3
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 3.0e-35 152.9 232 40.1
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 3.0e-35 152.9 136 55.1
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 8.7e-35 151.4 139 50.4
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 8.7e-35 151.4 139 50.4
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-34 151.0 146 47.9
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.2e-33 145.2 227 36.6
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.4e-32 143.3 115 56.5
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 1.2e-31 141.0 185 42.2
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 3.4e-31 139.4 303 30.0
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 1.4e-29 134.0 124 50.8
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 5.5e-29 132.1 209 38.8
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 1.2e-28 131.0 136 50.7
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.7e-28 129.8 224 33.9
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 6.0e-28 128.6 127 49.6
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 4.3e-26 122.5 180 39.4
Ah.16g101350 Amaranthus hybridus HOM05D005276 ORTHO05D038198 1.8e-24 117.1 236 34.7
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 9.0e-24 114.8 141 43.3
AUR62037739 Chenopodium quinoa HOM05D005276 ORTHO05D038198 4.5e-23 112.5 238 33.2
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 1.4e-21 107.5 148 39.2
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.6e-20 104.0 169 37.9
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 3.6e-20 102.8 133 41.4
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.6e-20 102.8 123 46.3
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 4.6e-20 102.4 133 43.6
Phvul.007G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.9e-19 99.4 112 42.9
TPR.G40462 Trifolium pratense HOM05D005276 ORTHO05D006813 2.8e-17 93.2 113 43.4
RcHm_v2.0_Chr5g0076541 Rosa chinensis HOM05D005276 ORTHO05D006813 1.1e-16 91.3 76 56.6
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 5.9e-15 85.5 102 42.2
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 7.7e-15 85.1 93 46.2
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 9.4e-13 78.2 128 38.3
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 1.1e-10 71.2 84 44.0
TPR.G33490 Trifolium pratense HOM05D005276 ORTHO05D006813 1.7e-09 67.4 88 40.9
TPR.G33511 Trifolium pratense HOM05D005276 ORTHO05D006813 2.2e-09 67.0 76 47.4
Dinv42430 Davidia involucrata HOM05D005276 ORTHO05D006813 1.8e-08 63.9 81 40.7
Dinv03816 Davidia involucrata HOM05D031496 ORTHO05D029219 2.0e-07 60.5 57 49.1
Psat1g051400 Pisum sativum HOM05D005276 ORTHO05D006813 5.0e-06 55.8 71 42.3


User provided reference genes

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