Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s2465g0160 Pisum sativum HOM05D001072 ORTHO05D006807 1.1e-122 443.4 223 100.0
Psat2g054080 Pisum sativum HOM05D001072 ORTHO05D006807 3.6e-86 322.0 172 95.9
Medtr5g074510 Medicago truncatula HOM05D001072 ORTHO05D006807 5.7e-84 314.7 172 94.2
TPR.G25340 Trifolium pratense HOM05D001072 ORTHO05D006807 2.8e-83 312.4 172 93.0
Ca_05680_v3 Cicer arietinum L. HOM05D001072 ORTHO05D006807 2.7e-81 305.8 172 90.1
LjContig00141g0020287 Lotus japonicus HOM05D001072 ORTHO05D006807 3.0e-77 292.4 172 86.6
arahy.Tifrunner.gnm1.ann1.QD7CJP Arachis hypogaea HOM05D001072 ORTHO05D006807 2.8e-75 285.8 171 84.2
arahy.Tifrunner.gnm1.ann1.XX59BG Arachis hypogaea HOM05D001072 ORTHO05D006807 2.8e-75 285.8 171 84.2
Glyma.02G232900 Glycine max HOM05D001072 ORTHO05D006807 2.4e-74 282.7 172 83.1
Gohir.A03G024800 Gossypium hirsutum HOM05D001072 ORTHO05D006807 2.7e-73 279.3 171 81.9
Gohir.D03G143700 Gossypium hirsutum HOM05D001072 ORTHO05D006807 4.5e-73 278.5 171 81.9
Lalb_Chr04g0251881 Lupinus albus HOM05D001072 ORTHO05D006807 5.9e-73 278.1 172 82.0
Phvul.008G250900 Phaseolus vulgaris HOM05D001072 ORTHO05D006807 3.8e-72 275.4 172 82.0
Thecc.09G359500 Theobroma cacao HOM05D001072 ORTHO05D006807 5.0e-72 275.0 171 81.3
QL01p025823 Quercus lobata HOM05D001072 ORTHO05D006807 1.5e-71 273.5 172 78.5
Duzib168G2177 Durio zibethinus HOM05D001072 ORTHO05D006807 2.5e-71 272.7 171 80.1
vmacro02906 Vaccinium macrocarpon HOM05D001072 ORTHO05D006807 1.4e-69 266.9 166 79.5
Rhsim13G0062700 Rhododendron simsii HOM05D001072 ORTHO05D006807 2.3e-69 266.2 166 78.9
CSS0035690 Camellia sinensis var. sinensis HOM05D001072 ORTHO05D006807 5.2e-69 265.0 166 79.5
COL.COLO4_11172 Corchorus olitorius HOM05D001072 ORTHO05D006807 2.6e-68 262.7 187 72.7
Haze_24430 Corylus avellana HOM05D001072 ORTHO05D006807 1.3e-67 260.4 172 73.8
Prupe.6G045900 Prunus persica HOM05D001072 ORTHO05D006807 1.3e-67 260.4 166 75.9
Actinidia32600 Actinidia chinensis HOM05D001072 ORTHO05D006807 1.7e-67 260.0 171 76.0
Manes.18G136800 Manihot esculenta HOM05D001072 ORTHO05D006807 2.9e-67 259.2 171 74.3
Lsat_1_v5_gn_8_108741 Lactuca sativa HOM05D001072 ORTHO05D006807 3.7e-67 258.8 165 76.4
MD03G1058100 Malus domestica HOM05D001072 ORTHO05D006807 6.4e-67 258.1 170 74.1
FAN25G0381 Fragaria x ananassa HOM05D001072 ORTHO05D006807 8.3e-67 257.7 171 73.7
HanXRQChr10g0312111 Helianthus annuus HOM05D001072 ORTHO05D006807 1.4e-66 256.9 165 75.8
FvH4_3g39950 Fragaria vesca HOM05D001072 ORTHO05D006807 1.8e-66 256.5 171 73.1
FAN16G0450 Fragaria x ananassa HOM05D001072 ORTHO05D006807 1.8e-66 256.5 171 73.1
PGSC0003DMG401017675 Solanum tuberosum HOM05D001072 ORTHO05D006807 1.8e-66 256.5 171 74.3
Gorai.003G151000 Gossypium raimondii HOM05D001072 ORTHO05D006807 3.2e-66 255.8 161 79.5
Atru.chr1.2576 Acer truncatum HOM05D001072 ORTHO05D006807 4.1e-66 255.4 169 76.9
Ciclev10000015m.g Citrus clementina HOM05D001072 ORTHO05D006807 5.4e-66 255.0 166 75.3
Oeu050029.1 Olea europaea HOM05D001072 ORTHO05D006807 5.4e-66 255.0 171 74.3
RcHm_v2.0_Chr5g0071961 Rosa chinensis HOM05D001072 ORTHO05D006807 5.4e-66 255.0 171 73.1
Cc01_g15000 Coffea canephora HOM05D001072 ORTHO05D006807 9.2e-66 254.2 171 74.9
CiPaw.13G067600 Carya illinoinensis HOM05D001072 ORTHO05D006807 1.2e-65 253.8 172 73.3
TWI31G1315 Tripterygium wilfordii HOM05D001072 ORTHO05D006807 2.0e-65 253.1 167 74.3
Solyc09g055260.4 Solanum lycopersicum HOM05D001072 ORTHO05D006807 3.5e-65 252.3 171 73.1
Sopen09g017350 Solanum pennellii HOM05D001072 ORTHO05D006807 3.5e-65 252.3 171 73.7
PSO017G5353 Papaver somniferum HOM05D001072 ORTHO05D006807 7.8e-65 251.1 171 71.9
FAN11G0037 Fragaria x ananassa HOM05D001072 ORTHO05D006807 1.0e-64 250.8 175 71.4
PSO170G6524 Papaver somniferum HOM05D001072 ORTHO05D006807 1.0e-64 250.8 171 71.3
MELO3C020494.2 Cucumis melo HOM05D001072 ORTHO05D006807 3.0e-64 249.2 171 71.3
MSTRG.21246 Avicennia marina HOM05D001072 ORTHO05D006807 3.9e-64 248.8 164 74.4
Potri.019G126000 Populus trichocarpa HOM05D001072 ORTHO05D006807 3.9e-64 248.8 173 74.0
Sabra19G0124000 Salix brachista HOM05D001072 ORTHO05D006807 3.9e-64 248.8 173 74.0
Sabra19G0130600 Salix brachista HOM05D001072 ORTHO05D006807 3.9e-64 248.8 173 74.0
CsaV3_1G036730 Cucumis sativus L. HOM05D001072 ORTHO05D006807 5.0e-64 248.4 171 71.3
Carub.0008s1900 Capsella rubella HOM05D001072 ORTHO05D006807 6.6e-64 248.1 194 63.9
ECA236G3191 Erigeron canadensis HOM05D001072 ORTHO05D006807 6.6e-64 248.1 165 73.3
VMungo0647G0153 Vigna mungo HOM05D001072 ORTHO05D006807 8.6e-64 247.7 239 59.4
Thhalv10012416m.g Eutrema salsugineum HOM05D001072 ORTHO05D006807 1.1e-63 247.3 166 72.9
Sp6g20090 Schrenkiella parvula HOM05D001072 ORTHO05D006807 1.1e-63 247.3 166 72.9
BcaC04g19869 Brassica carinata HOM05D001072 ORTHO05D006807 2.5e-63 246.1 195 64.6
A10p15850 Brassica napus HOM05D001072 ORTHO05D006807 2.5e-63 246.1 195 64.6
C09p50300 Brassica napus HOM05D001072 ORTHO05D006807 2.5e-63 246.1 195 64.6
Migut.D00839 Erythranthe guttata HOM05D001072 ORTHO05D006807 2.5e-63 246.1 171 70.8
PGR119G0697 Punica granatum HOM05D001072 ORTHO05D006807 5.6e-63 245.0 171 73.1
FAN21G1089 Fragaria x ananassa HOM05D001072 ORTHO05D006807 7.3e-63 244.6 186 66.7
AL8G34570 Arabidopsis lyrata HOM05D001072 ORTHO05D006807 9.5e-63 244.2 166 72.3
BcaB08g36177 Brassica carinata HOM05D001072 ORTHO05D006807 9.5e-63 244.2 195 64.6
CANSAT54G0981 Cannabis sativa HOM05D001072 ORTHO05D006807 9.5e-63 244.2 171 70.2
Sed0011357 Sechium edule HOM05D001072 ORTHO05D006807 9.5e-63 244.2 171 70.8
Sc06g0008120 Simmondsia chinensis HOM05D001072 ORTHO05D006807 9.5e-63 244.2 171 70.8
A03p12250 Brassica napus HOM05D001072 ORTHO05D006807 1.2e-62 243.8 166 71.7
C03p14380 Brassica napus HOM05D001072 ORTHO05D006807 1.2e-62 243.8 166 71.7
CARHR272240 Cardamine hirsuta HOM05D001072 ORTHO05D006807 1.6e-62 243.4 166 71.7
AT5G58410 Arabidopsis thaliana HOM05D001072 ORTHO05D006807 3.6e-62 242.3 166 71.1
BcaB01g04524 Brassica carinata HOM05D001072 ORTHO05D006807 4.7e-62 241.9 166 71.7
DCAR_018643 Daucus carota HOM05D001072 ORTHO05D006807 1.0e-61 240.7 169 69.8
THA.LOC104810689 Tarenaya hassleriana HOM05D001072 ORTHO05D006807 1.4e-61 240.4 166 71.7
ClCG03G000170 Citrullus lanatus HOM05D001072 ORTHO05D006807 1.8e-61 240.0 164 72.0
CDE04G3416 Ceratophyllum demersum HOM05D001072 ORTHO05D006807 3.1e-61 239.2 172 66.9
Hund08884 Selenicereus undatus HOM05D001072 ORTHO05D006807 4.0e-61 238.8 166 71.1
EL10Ac8g18974 Beta vulgaris HOM05D001072 ORTHO05D006807 8.9e-61 237.7 166 71.7
BraA10t43640Z Brassica rapa HOM05D001072 ORTHO05D006807 8.9e-61 237.7 208 60.6
BolC9t57885H Brassica oleracea HOM05D001072 ORTHO05D006807 1.5e-60 236.9 208 60.6
ATR0681G329 Amborella trichopoda HOM05D001072 ORTHO05D006807 4.4e-60 235.3 167 66.5
BraA03t10536Z Brassica rapa HOM05D001072 ORTHO05D006807 4.4e-60 235.3 179 66.5
AUR62028316 Chenopodium quinoa HOM05D001072 ORTHO05D006807 9.8e-60 234.2 171 67.3
AUR62025311 Chenopodium quinoa HOM05D001072 ORTHO05D006807 1.3e-59 233.8 171 67.8
BolC3t13881H Brassica oleracea HOM05D001072 ORTHO05D006807 1.7e-59 233.4 179 65.9
Nn2g11057 Nelumbo nucifera HOM05D001072 ORTHO05D006807 8.3e-59 231.1 167 67.1
Zm00001eb093280 Zea mays HOM05D001072 ORTHO05D006807 5.4e-58 228.4 167 63.5
Os01g0977600 Oryza sativa ssp. japonica HOM05D001072 ORTHO05D006807 9.2e-58 227.6 167 65.9
Aqoxy4G02167 Aquilegia oxysepala HOM05D001072 ORTHO05D006807 3.9e-56 222.2 167 66.5
CSS0014731 Camellia sinensis var. sinensis HOM05D001072 ORTHO05D006807 3.9e-56 222.2 166 72.3
Nitab4.5_0000684g0150 Nicotiana tabacum HOM05D001072 ORTHO05D006807 4.0e-53 212.2 171 64.3
SGA_v2.0_scaffold20G09297 Striga asiatica HOM05D001072 ORTHO05D006807 8.9e-53 211.1 152 66.4
HPP92_011994 Vanilla planifolia HOM05D001072 ORTHO05D006807 1.4e-50 203.8 167 60.5
SEGI_04376 Sequoiadendron giganteum HOM05D001072 ORTHO05D006807 3.2e-50 202.6 168 57.1
HPP92_012011 Vanilla planifolia HOM05D001072 ORTHO05D006807 4.1e-50 202.2 167 59.9
SMO367G0609 Selaginella moellendorffii HOM05D001072 ORTHO05D006807 9.5e-47 191.0 165 52.7
Mapoly0076s0060 Marchantia polymorpha HOM05D001072 ORTHO05D006807 3.6e-46 189.1 166 54.2
Psat4g121040 Pisum sativum HOM05D001072 ORTHO05D006807 4.7e-46 188.7 96 95.8
AagrBONN_evm.TU.Sc2ySwM_344.918 Anthoceros agrestis HOM05D001072 ORTHO05D006807 9.9e-44 181.0 168 53.0
Peaxi162Scf00055g00202 Petunia axillaris HOM05D001072 ORTHO05D006807 8.4e-43 177.9 138 68.8
Dinv12247 Davidia involucrata HOM05D001072 ORTHO05D006807 5.4e-42 175.3 103 81.6
Pp3c11_1040 Physcomitrium patens HOM05D001072 ORTHO05D006807 9.6e-39 164.5 166 48.2
unitig_0.g202 Utricularia gibba HOM05D001072 ORTHO05D006807 7.6e-36 154.8 165 52.1
MBI03_g13043_MAGBIO Magnolia biondii HOM05D001072 ORTHO05D006807 2.9e-35 152.9 109 67.9
Psat3g023200 Pisum sativum HOM05D001072 ORTHO05D006807 7.3e-31 138.3 77 89.6
Cpa.g.sc2.338 Carica papaya HOM05D001072 ORTHO05D006807 9.0e-29 131.3 82 73.2
TAR623G0321 Trochodendron aralioides HOM05D001072 ORTHO05D006807 2.0e-28 130.2 106 67.0
TAR623G1063 Trochodendron aralioides HOM05D001072 ORTHO05D006807 2.0e-28 130.2 106 67.0
Cre06.g252100 Chlamydomonas reinhardtii HOM05D001072 ORTHO05D006807 4.3e-23 112.5 170 35.3
TPR.G25341 Trifolium pratense HOM05D001072 ORTHO05D006807 1.8e-21 107.1 101 61.4
MBI03_g13045_MAGBIO Magnolia biondii HOM05D001072 ORTHO05D006807 4.5e-20 102.4 68 72.1
Nitab4.5_0000046g0010 Nicotiana tabacum HOM05D001072 ORTHO05D006807 6.4e-19 98.6 64 71.9
Lj2A1095G44 Lonicera japonica HOM05D001072 ORTHO05D006807 5.5e-18 95.5 104 56.7
CBR_g30901 Chara braunii HOM05D001072 ORTHO05D006807 1.6e-17 94.0 95 46.3
PRCOL_00002801 Prasinoderma coloniale HOM05D001072 ORTHO05D006807 4.0e-13 79.3 165 29.1
Lj2A1095G45 Lonicera japonica HOM05D001072 ORTHO05D006807 1.3e-06 57.8 34 79.4


User provided reference genes

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