Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 2.3e-105 385.6 191 100.0
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 2.0e-69 266.2 193 76.2
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 3.8e-44 182.2 191 56.0
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 2.5e-43 179.5 191 56.0
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 2.5e-43 179.5 191 56.0
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 2.7e-42 176.0 191 55.0
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 3.1e-38 162.5 173 55.5
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 1.2e-37 160.6 133 63.2
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 1.7e-36 156.8 190 50.0
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 8.5e-36 154.5 115 68.7
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 1.1e-35 154.1 193 47.7
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 5.5e-35 151.8 135 60.0
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 7.2e-35 151.4 144 56.9
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 7.2e-35 151.4 192 46.9
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 9.4e-35 151.0 115 67.0
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 1.2e-34 150.6 131 60.3
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 4.6e-34 148.7 191 48.2
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 1.4e-33 147.1 187 48.1
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 5.1e-33 145.2 113 62.8
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 8.8e-33 144.4 193 49.7
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 1.1e-32 144.1 142 56.3
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 1.1e-32 144.1 186 49.5
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 1.1e-32 144.1 186 49.5
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 1.1e-32 144.1 200 46.0
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 4.4e-32 142.1 186 48.9
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 4.4e-32 142.1 186 48.9
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 4.4e-32 142.1 186 48.9
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 7.4e-32 141.4 194 45.4
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 7.4e-32 141.4 115 60.9
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 2.2e-31 139.8 187 45.5
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 2.8e-31 139.4 201 44.8
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 2.8e-31 139.4 190 45.3
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 3.7e-31 139.0 198 46.5
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 3.7e-31 139.0 140 50.7
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 4.8e-31 138.7 187 45.5
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 6.3e-31 138.3 189 47.6
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 8.2e-31 137.9 102 68.6
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 1.1e-30 137.5 143 51.7
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 1.1e-30 137.5 186 46.2
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 1.8e-30 136.7 76 81.6
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 2.4e-30 136.3 186 47.3
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 2.4e-30 136.3 144 50.7
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 2.4e-30 136.3 107 61.7
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 4.1e-30 135.6 123 60.2
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 4.1e-30 135.6 130 56.9
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 5.3e-30 135.2 123 59.3
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 5.3e-30 135.2 114 61.4
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 9.1e-30 134.4 162 47.5
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 1.2e-29 134.0 95 66.3
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 3.4e-29 132.5 97 66.0
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 3.4e-29 132.5 124 58.1
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 4.5e-29 132.1 123 56.1
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 4.5e-29 132.1 183 43.2
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 5.9e-29 131.7 123 56.9
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 7.7e-29 131.3 182 46.7
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 7.7e-29 131.3 100 65.0
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 7.7e-29 131.3 191 45.5
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 1.0e-28 131.0 87 72.4
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 1.0e-28 131.0 197 44.2
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 1.3e-28 130.6 112 61.6
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 1.3e-28 130.6 112 61.6
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 1.3e-28 130.6 99 63.6
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 1.3e-28 130.6 102 63.7
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 2.2e-28 129.8 91 71.4
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 2.2e-28 129.8 192 44.8
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 2.2e-28 129.8 107 61.7
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 2.2e-28 129.8 138 47.8
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 2.2e-28 129.8 174 46.0
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 2.9e-28 129.4 138 53.6
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 2.9e-28 129.4 138 53.6
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 6.5e-28 128.3 150 50.7
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 6.5e-28 128.3 180 45.0
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 1.4e-27 127.1 165 47.3
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 1.9e-27 126.7 82 72.0
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 1.9e-27 126.7 98 64.3
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 3.2e-27 125.9 180 44.4
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 4.2e-27 125.6 191 44.5
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 4.2e-27 125.6 175 45.7
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 5.5e-27 125.2 146 50.0
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 5.5e-27 125.2 185 42.7
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 1.6e-26 123.6 149 49.0
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 4.7e-26 122.1 78 67.9
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 6.1e-26 121.7 75 72.0
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 7.9e-26 121.3 194 40.7
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 1.0e-25 120.9 185 40.0
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 3.9e-25 119.0 71 71.8
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 5.2e-25 118.6 77 70.1
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 8.8e-25 117.9 107 55.1
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 1.5e-24 117.1 211 37.4
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 5.7e-24 115.2 144 45.8
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 8.2e-23 111.3 106 56.6
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 2.6e-21 106.3 119 47.9
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 3.5e-21 105.9 82 63.4
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 1.7e-20 103.6 132 44.7
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 9.4e-19 97.8 115 46.1
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 1.6e-18 97.1 67 64.2
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 2.7e-18 96.3 75 62.7
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 1.5e-16 90.5 89 51.7
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 2.7e-13 79.7 160 34.4
PRCOL_00005620 Prasinoderma coloniale HOM05D007514 ORTHO05D009469 4.8e-07 58.9 62 46.8
MCO09G231 Micromonas commoda HOM05D007514 ORTHO05D009469 1.4e-06 57.4 57 40.4


User provided reference genes

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