Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 8.3e-70 266.9 136 100.0
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 1.3e-54 216.5 121 90.1
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 2.2e-54 215.7 121 89.3
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 4.6e-52 208.0 122 85.2
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 7.8e-52 207.2 120 85.0
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 8.7e-51 203.8 123 82.1
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 1.5e-50 203.0 122 83.6
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 2.1e-49 199.1 121 81.0
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 2.8e-49 198.7 120 80.8
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 4.8e-49 198.0 121 81.8
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 8.1e-49 197.2 119 83.2
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 1.1e-48 196.8 121 82.6
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 1.8e-48 196.1 135 74.1
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.4e-48 195.7 121 81.8
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.4e-48 195.7 121 81.8
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 4.0e-48 194.9 121 81.8
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 9.0e-48 193.7 120 78.3
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.2e-47 193.4 121 81.8
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.2e-47 193.4 121 81.8
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 1.2e-47 193.4 120 78.3
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 1.5e-47 193.0 135 73.3
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 2.0e-47 192.6 120 76.7
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 1.3e-46 189.9 116 81.0
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 1.7e-46 189.5 160 64.4
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.2e-46 189.1 131 77.1
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 4.9e-46 188.0 124 79.8
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 6.4e-46 187.6 124 79.0
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 1.1e-45 186.8 121 79.3
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 1.4e-45 186.4 124 78.2
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 1.9e-45 186.0 121 78.5
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 5.4e-45 184.5 115 76.5
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 1.6e-44 183.0 121 75.2
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 4.6e-44 181.4 120 75.8
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 1.3e-43 179.9 121 74.4
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 1.3e-43 179.9 122 73.8
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 2.3e-43 179.1 122 73.8
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 3.9e-43 178.3 120 71.7
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 1.1e-42 176.8 122 72.1
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 1.5e-42 176.4 120 72.5
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 1.5e-42 176.4 120 71.7
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 2.5e-42 175.6 123 70.7
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 4.3e-42 174.9 123 74.0
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 4.3e-42 174.9 123 69.9
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 1.6e-41 172.9 122 73.8
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 3.7e-41 171.8 129 69.8
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 8.1e-41 170.6 121 70.2
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.1e-40 170.2 123 72.4
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 1.4e-40 169.9 120 70.8
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 2.4e-40 169.1 123 67.5
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 3.1e-40 168.7 110 74.5
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 1.2e-39 166.8 122 67.2
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 2.0e-39 166.0 125 66.4
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 2.0e-39 166.0 151 61.6
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 4.5e-39 164.9 228 46.5
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 9.9e-39 163.7 123 65.9
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 2.2e-38 162.5 87 93.1
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 3.8e-38 161.8 115 68.7
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 3.8e-38 161.8 123 64.2
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 6.4e-38 161.0 115 67.8
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 6.4e-38 161.0 120 69.2
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 8.4e-38 160.6 115 67.0
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 8.4e-38 160.6 115 67.0
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 8.4e-38 160.6 115 67.0
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 8.4e-38 160.6 115 67.0
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 9.3e-37 157.1 121 62.8
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 2.1e-36 156.0 115 66.1
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 2.7e-36 155.6 115 66.1
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 2.7e-36 155.6 122 61.5
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 4.6e-36 154.8 115 65.2
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 7.9e-36 154.1 112 67.9
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 1.0e-35 153.7 112 67.0
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 3.0e-35 152.1 117 65.8
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 3.0e-35 152.1 117 66.7
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 3.9e-35 151.8 118 62.7
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 5.1e-35 151.4 116 65.5
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 5.1e-35 151.4 115 63.5
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 6.7e-35 151.0 118 62.7
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 8.7e-35 150.6 115 65.2
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 8.7e-35 150.6 123 61.0
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 1.5e-34 149.8 118 63.6
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 1.5e-34 149.8 118 66.9
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 1.9e-34 149.4 118 61.9
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 5.6e-34 147.9 125 59.2
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 1.6e-33 146.4 134 59.7
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 4.8e-33 144.8 116 61.2
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 4.8e-33 144.8 112 64.3
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 4.8e-33 144.8 112 64.3
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 4.8e-33 144.8 123 59.3
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 8.2e-33 144.1 99 72.7
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 1.8e-32 142.9 203 45.3
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 1.8e-32 142.9 117 59.8
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 4.0e-32 141.7 92 78.3
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 5.3e-32 141.4 86 76.7
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 1.2e-31 140.2 103 74.8
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 1.7e-30 136.3 87 74.7
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 6.5e-30 134.4 109 62.4
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.1e-29 133.7 93 73.1
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 1.4e-29 133.3 86 79.1
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.9e-29 132.9 93 73.1
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.9e-29 132.9 93 73.1
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 3.5e-28 128.6 82 75.6
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 5.7e-26 121.3 114 53.5
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 9.7e-26 120.6 89 67.4
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 2.0e-23 112.8 90 63.3
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 8.5e-22 107.5 86 64.0
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 1.4e-21 106.7 119 43.7
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 2.8e-17 92.4 111 45.9
Mapoly0064s0018 Marchantia polymorpha HOM05D007336 ORTHO05D009339 1.1e-10 70.5 80 41.2


User provided reference genes

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