Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G016400 Prunus persica HOM05D006253 ORTHO05D007666 1.4e-63 246.1 127 100.0
Prupe.4G258000 Prunus persica HOM05D006253 ORTHO05D007666 3.3e-36 155.2 100 82.0
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 1.3e-32 143.3 128 64.8
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 1.4e-31 139.8 128 63.3
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 5.5e-31 137.9 128 60.9
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 5.5e-31 137.9 128 60.9
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 5.5e-31 137.9 128 62.5
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.2e-30 136.7 130 61.5
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 1.8e-29 132.9 128 57.8
Prupe.2G172700 Prunus persica HOM05D006253 ORTHO05D007666 1.8e-29 132.9 72 94.4
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 3.9e-29 131.7 128 57.8
Duzib052G0633 Durio zibethinus HOM05D006253 ORTHO05D007666 8.7e-29 130.6 128 57.8
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 8.7e-29 130.6 128 57.8
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 1.5e-28 129.8 128 60.9
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 1.5e-28 129.8 128 57.0
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 2.5e-28 129.0 128 57.8
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 4.3e-28 128.3 128 57.8
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 5.6e-28 127.9 128 57.0
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 7.4e-28 127.5 104 65.4
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 7.4e-28 127.5 109 66.1
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 9.6e-28 127.1 128 56.2
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 1.3e-27 126.7 128 60.2
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 1.6e-27 126.3 128 56.2
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 2.8e-27 125.6 128 56.2
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 2.8e-27 125.6 128 56.2
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 2.8e-27 125.6 128 57.8
MBI02_g02992_MAGBIO Magnolia biondii HOM05D006253 ORTHO05D007666 3.7e-27 125.2 128 56.2
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 3.7e-27 125.2 127 57.5
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 4.8e-27 124.8 128 56.2
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 4.8e-27 124.8 128 56.2
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 6.2e-27 124.4 103 65.0
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 6.2e-27 124.4 128 56.2
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 6.2e-27 124.4 104 62.5
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 6.2e-27 124.4 94 67.0
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 8.2e-27 124.0 127 55.1
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 1.1e-26 123.6 128 55.5
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 1.1e-26 123.6 127 56.7
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 1.4e-26 123.2 128 56.2
arahy.Tifrunner.gnm1.ann1.1E2X9I Arachis hypogaea HOM05D006253 ORTHO05D007666 2.4e-26 122.5 116 57.8
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 2.4e-26 122.5 127 55.9
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 3.1e-26 122.1 116 57.8
arahy.Tifrunner.gnm1.ann1.5N1458 Arachis hypogaea HOM05D006253 ORTHO05D007666 5.3e-26 121.3 128 53.1
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 6.9e-26 120.9 103 67.0
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 6.9e-26 120.9 104 65.4
Carub.0007s0590 Capsella rubella HOM05D006253 ORTHO05D007666 9.0e-26 120.6 102 65.7
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 9.0e-26 120.6 128 56.2
Phvul.002G266500 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 9.0e-26 120.6 94 66.0
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 1.2e-25 120.2 94 66.0
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 1.5e-25 119.8 128 53.9
Medtr8g099835 Medicago truncatula HOM05D006253 ORTHO05D007666 1.5e-25 119.8 128 53.9
Psat5g098280 Pisum sativum HOM05D006253 ORTHO05D007666 1.5e-25 119.8 128 53.1
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 3.4e-25 118.6 116 59.5
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 4.5e-25 118.2 102 64.7
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 4.5e-25 118.2 109 58.7
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 4.5e-25 118.2 96 63.5
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 4.5e-25 118.2 102 64.7
A01p04020 Brassica napus HOM05D006253 ORTHO05D007666 5.8e-25 117.9 102 65.7
CARHR242350 Cardamine hirsuta HOM05D006253 ORTHO05D007666 5.8e-25 117.9 102 63.7
BcaNung06978 Brassica carinata HOM05D006253 ORTHO05D007666 1.0e-24 117.1 102 64.7
Sed0021593 Sechium edule HOM05D006253 ORTHO05D007666 1.0e-24 117.1 95 63.2
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 1.7e-24 116.3 102 64.7
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 1.7e-24 116.3 128 51.6
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 2.2e-24 115.9 102 62.7
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 2.2e-24 115.9 104 60.6
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 2.9e-24 115.5 128 51.6
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 3.8e-24 115.2 102 63.7
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 4.9e-24 114.8 128 53.1
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 4.9e-24 114.8 128 53.1
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 6.5e-24 114.4 116 55.2
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 8.4e-24 114.0 102 61.8
C07p60590 Brassica napus HOM05D006253 ORTHO05D007666 8.4e-24 114.0 102 62.7
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 8.4e-24 114.0 102 62.7
HanXRQChr10g0319791 Helianthus annuus HOM05D006253 ORTHO05D007666 8.4e-24 114.0 128 50.8
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 8.4e-24 114.0 128 50.8
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 1.4e-23 113.2 128 50.8
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 1.9e-23 112.8 127 52.8
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 2.5e-23 112.5 128 50.0
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 3.2e-23 112.1 103 57.3
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 3.2e-23 112.1 137 52.6
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 3.2e-23 112.1 128 50.8
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 7.1e-23 110.9 103 61.2
PSO478G4849 Papaver somniferum HOM05D006253 ORTHO05D007666 1.6e-22 109.8 128 52.3
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 1.6e-22 109.8 128 50.0
Solyc01g108260.4 Solanum lycopersicum HOM05D006253 ORTHO05D007666 2.1e-22 109.4 128 50.0
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 2.7e-22 109.0 108 55.6
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 1.5e-20 103.2 128 48.4
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 1.9e-20 102.8 103 55.3
SMO351G0094 Selaginella moellendorffii HOM05D006253 ORTHO05D007666 1.9e-20 102.8 96 55.2
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 7.4e-20 100.9 96 52.1
DCAR_007862 Daucus carota HOM05D006253 ORTHO05D007666 7.4e-20 100.9 128 49.2
Ah.10g034240 Amaranthus hybridus HOM05D006253 ORTHO05D007666 1.3e-19 100.1 82 62.2
Cc02_g18770 Coffea canephora HOM05D006253 ORTHO05D007666 2.2e-19 99.4 85 61.2
Mapoly0083s0082 Marchantia polymorpha HOM05D006253 ORTHO05D007666 2.2e-19 99.4 102 50.0
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 1.8e-18 96.3 78 64.1
AUR62029937 Chenopodium quinoa HOM05D006253 ORTHO05D007666 1.5e-17 93.2 90 56.7
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 2.6e-17 92.4 108 51.9
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 5.9e-17 91.3 128 48.4
CSS0033941 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 2.9e-16 89.0 103 54.4
Pp3c22_3990 Physcomitrium patens HOM05D006253 ORTHO05D007666 3.8e-16 88.6 96 47.9
Medtr2g105210 Medicago truncatula HOM05D006253 ORTHO05D007666 8.5e-16 87.4 85 54.1
C01p04340 Brassica napus HOM05D006253 ORTHO05D007666 1.4e-15 86.7 85 62.4
SalBow3G2580 Salvia bowleyana HOM05D006253 ORTHO05D007666 1.4e-15 86.7 82 57.3
vmacro06019 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 1.4e-15 86.7 91 57.1
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 5.5e-15 84.7 109 48.6
AUR62033746 Chenopodium quinoa HOM05D006253 ORTHO05D007666 1.2e-14 83.6 109 46.8
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 2.1e-14 82.8 128 43.8
Prupe.4G259300 Prunus persica HOM05D006253 ORTHO05D007666 2.1e-14 82.8 93 54.8
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 2.7e-14 82.4 95 46.3
MD10G1094500 Malus domestica HOM05D006253 ORTHO05D007666 1.5e-12 76.6 74 62.2
Sabra09G0078100 Salix brachista HOM05D006253 ORTHO05D007666 9.7e-12 73.9 82 53.7
Hma1.2p1_0804F.1_g221060 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 2.2e-11 72.8 69 59.4
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 1.4e-10 70.1 109 44.0
BolC1t00422H Brassica oleracea HOM05D006253 ORTHO05D007666 1.8e-10 69.7 53 77.4
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 9.1e-10 67.4 128 39.8
SEGI_00233 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 1.2e-09 67.0 58 56.9
Hma1.2p1_0674F.1_g201500 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.7e-08 63.2 45 66.7
Aqoxy5G01240 Aquilegia oxysepala HOM05D006253 ORTHO05D007666 3.8e-08 62.0 63 55.6
Cre01.g030950 Chlamydomonas reinhardtii HOM05D006253 ORTHO05D007666 5.0e-08 61.6 96 35.4
Migut.N01188 Erythranthe guttata HOM05D006253 ORTHO05D007666 3.2e-07 58.9 45 62.2
MCO10G211 Micromonas commoda HOM05D006253 ORTHO05D007666 5.5e-07 58.2 98 37.8
SEGI_00525 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 3.6e-06 55.5 43 60.5


User provided reference genes

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