Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G162900 Prunus persica HOM05D007296 ORTHO05D009201 1.2e-71 273.1 137 100.0
CiPaw.11G015200 Carya illinoinensis HOM05D007296 ORTHO05D009201 3.6e-28 128.6 123 61.0
Sabra15G0109100 Salix brachista HOM05D000631 ORTHO05D000524 8.0e-28 127.5 137 51.1
Thecc.03G117800 Theobroma cacao HOM05D007296 ORTHO05D009201 2.3e-27 125.9 113 54.9
Glyma.05G042900 Glycine max HOM05D007296 ORTHO05D009201 2.0e-26 122.9 120 57.5
Nn3g16657 Nelumbo nucifera HOM05D007296 ORTHO05D009201 4.4e-26 121.7 137 51.1
TAR371G0818 Trochodendron aralioides HOM05D007296 ORTHO05D009201 4.4e-26 121.7 137 51.8
QL10p006090 Quercus lobata HOM05D007296 ORTHO05D009201 3.7e-25 118.6 135 54.1
Ca_30679_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 1.8e-24 116.3 114 51.8
COL.COLO4_30221 Corchorus olitorius HOM05D007296 ORTHO05D009201 4.1e-24 115.2 117 47.9
Lalb_Chr07g0183081 Lupinus albus HOM05D007296 ORTHO05D009201 4.1e-24 115.2 135 48.9
Lj4g0005296 Lotus japonicus HOM05D007296 ORTHO05D009201 5.3e-24 114.8 141 49.6
Gohir.A07G055400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 7.7e-23 110.9 113 50.4
Manes.14G057736 Manihot esculenta HOM05D007296 ORTHO05D009201 7.7e-23 110.9 131 48.9
Gohir.D07G059700 Gossypium hirsutum HOM05D007296 ORTHO05D009201 1.3e-22 110.2 113 50.4
Gorai.001G063200 Gossypium raimondii HOM05D007296 ORTHO05D009201 1.3e-22 110.2 113 50.4
Phvul.003G206500 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 1.7e-22 109.8 114 48.2
Ciclev10022926m.g Citrus clementina HOM05D007296 ORTHO05D009201 2.2e-22 109.4 119 51.3
Nn4g22550 Nelumbo nucifera HOM05D007296 ORTHO05D009201 2.9e-22 109.0 124 52.4
Haze_14767 Corylus avellana HOM05D007296 ORTHO05D009201 6.5e-22 107.8 137 44.5
CSS0008661 Camellia sinensis var. sinensis HOM05D007296 ORTHO05D009201 1.5e-21 106.7 142 46.5
Cfa007330 Carpinus fangiana HOM05D007296 ORTHO05D009201 3.2e-21 105.5 137 44.5
PSO017G3033 Papaver somniferum HOM05D007296 ORTHO05D009201 6.1e-20 101.3 135 42.2
Aqoxy7G03797 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 6.8e-19 97.8 118 44.9
VMungo1215G1852 Vigna mungo HOM05D007296 ORTHO05D009201 1.2e-18 97.1 118 49.2
Hma1.2p1_0818F.1_g223340 Hydrangea macrophylla HOM05D007296 ORTHO05D009201 2.6e-18 95.9 136 46.3
MBI10_g42976_MAGBIO Magnolia biondii HOM05D007296 ORTHO05D009201 9.7e-18 94.0 138 42.8
TAR374G0807 Trochodendron aralioides HOM05D007296 ORTHO05D009201 9.7e-18 94.0 128 43.8
Aqoxy5G03689 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 4.8e-17 91.7 114 43.9
CiPaw.03G046500 Carya illinoinensis HOM05D007296 ORTHO05D009201 4.8e-17 91.7 139 41.0
Potri.001G342100 Populus trichocarpa HOM05D007296 ORTHO05D009201 1.8e-16 89.7 115 46.1
Aqoxy3G01286 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 7.0e-16 87.8 108 42.6
Glyma.16G068200 Glycine max HOM05D007296 ORTHO05D009201 7.0e-16 87.8 116 43.1
Manes.15G152600 Manihot esculenta HOM05D007296 ORTHO05D009201 7.0e-16 87.8 127 40.9
Glyma.19G078800 Glycine max HOM05D007296 ORTHO05D009201 2.7e-15 85.9 116 43.1
CiPaw.04G030100 Carya illinoinensis HOM05D007296 ORTHO05D009201 3.5e-15 85.5 139 39.6
Dinv33417 Davidia involucrata HOM05D007296 ORTHO05D009201 7.7e-15 84.3 110 49.1
QL10p006100 Quercus lobata HOM05D007296 ORTHO05D009201 7.7e-15 84.3 106 50.9
Lj1g0014101 Lotus japonicus HOM05D007296 ORTHO05D009201 1.7e-14 83.2 116 40.5
Eucgr.I01721 Eucalyptus grandis HOM05D007296 ORTHO05D009201 2.9e-14 82.4 137 42.3
Cc02_g32290 Coffea canephora HOM05D007296 ORTHO05D009201 8.5e-14 80.9 120 38.3
DCAR_021738 Daucus carota HOM05D000631 ORTHO05D000524 8.5e-14 80.9 109 43.1
QL02p073829 Quercus lobata HOM05D007296 ORTHO05D009201 8.5e-14 80.9 136 39.7
Duzib187G0331 Durio zibethinus HOM05D007296 ORTHO05D009201 1.1e-13 80.5 129 41.1
Atru.chr6.2441 Acer truncatum HOM05D007296 ORTHO05D009201 3.2e-13 79.0 141 39.0
SGA_v2.0_scaffold18G08254 Striga asiatica HOM05D007296 ORTHO05D009201 3.2e-13 79.0 115 40.0
SalBow1G6940 Salvia bowleyana HOM05D007296 ORTHO05D009201 5.5e-13 78.2 109 43.1
ATR0199G042 Amborella trichopoda HOM05D007296 ORTHO05D009201 9.4e-13 77.4 103 43.7
VMungo1383G0878 Vigna mungo HOM05D007296 ORTHO05D009201 1.2e-12 77.0 116 38.8
Lsat_1_v5_gn_0_6101 Lactuca sativa HOM05D007296 ORTHO05D009201 1.6e-12 76.6 113 39.8
TWI56G0033 Tripterygium wilfordii HOM05D007296 ORTHO05D009201 1.6e-12 76.6 135 39.3
Sc16g0004380 Simmondsia chinensis HOM05D007296 ORTHO05D009201 2.1e-12 76.3 106 44.3
Cpa.g.sc130.72 Carica papaya HOM05D007296 ORTHO05D009201 2.7e-12 75.9 149 38.9
Lsat_1_v5_gn_2_91081 Lactuca sativa HOM05D007296 ORTHO05D009201 4.7e-12 75.1 102 45.1
ClCG09G019420 Citrullus lanatus HOM05D007296 ORTHO05D009201 6.1e-12 74.7 110 40.9
Phvul.008G151600 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 8.0e-12 74.3 70 47.1
Psat3g172000 Pisum sativum HOM05D007296 ORTHO05D009201 8.0e-12 74.3 109 38.5
PGSC0003DMG400012614 Solanum tuberosum HOM05D007296 ORTHO05D009201 8.0e-12 74.3 124 36.3
Lalb_Chr22g0360681 Lupinus albus HOM05D007296 ORTHO05D009201 1.0e-11 73.9 108 37.0
TPR.G1088 Trifolium pratense HOM05D007296 ORTHO05D009201 1.0e-11 73.9 107 40.2
Ciclev10017118m.g Citrus clementina HOM05D007296 ORTHO05D009201 1.8e-11 73.2 140 39.3
Gohir.A09G030400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 1.8e-11 73.2 141 36.2
Ca_06610_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 3.0e-11 72.4 117 37.6
Ca_30727_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 3.0e-11 72.4 117 37.6
CAN.G473.34 Capsicum annuum HOM05D007296 ORTHO05D009201 4.0e-11 72.0 119 40.3
Gohir.D09G030000 Gossypium hirsutum HOM05D007296 ORTHO05D009201 4.0e-11 72.0 141 36.2
Medtr7g033080 Medicago truncatula HOM05D007296 ORTHO05D009201 4.0e-11 72.0 104 40.4
Thecc.04G021100 Theobroma cacao HOM05D007296 ORTHO05D009201 8.8e-11 70.9 129 38.0
FvH4_6g51980 Fragaria vesca HOM05D007296 ORTHO05D009201 1.5e-10 70.1 145 37.9
SGA_v2.0_scaffold135G34923 Striga asiatica HOM05D007296 ORTHO05D009201 1.5e-10 70.1 108 40.7
MELO3C021597.2 Cucumis melo HOM05D007296 ORTHO05D009201 5.7e-10 68.2 127 34.6
Aa31LG11G15190 Aethionema arabicum HOM05D007296 ORTHO05D009201 9.8e-10 67.4 137 38.0
Migut.H00030 Erythranthe guttata HOM05D007296 ORTHO05D009201 1.3e-09 67.0 124 38.7
Ah.12g055220 Amaranthus hybridus HOM05D007296 ORTHO05D009201 2.2e-09 66.2 117 35.0
EL10Ac5g12075 Beta vulgaris HOM05D007296 ORTHO05D009201 2.8e-09 65.9 117 40.2
CsaV3_5G026960 Cucumis sativus L. HOM05D007296 ORTHO05D009201 2.8e-09 65.9 127 34.6
PGR142G0831 Punica granatum HOM05D007296 ORTHO05D009201 4.8e-09 65.1 104 42.3
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 4.8e-09 65.1 111 39.6
Prupe.3G295100 Prunus persica HOM05D007296 ORTHO05D009201 6.3e-09 64.7 98 41.8
AT5G14410 Arabidopsis thaliana HOM05D007296 ORTHO05D009201 8.3e-09 64.3 137 35.0
FAN09G0682 Fragaria x ananassa HOM05D007296 ORTHO05D009201 8.3e-09 64.3 123 38.2
FAN14G0692 Fragaria x ananassa HOM05D007296 ORTHO05D009201 8.3e-09 64.3 122 39.3
Sed0024202 Sechium edule HOM05D007296 ORTHO05D009201 8.3e-09 64.3 106 36.8
THA.LOC104821171 Tarenaya hassleriana HOM05D007296 ORTHO05D009201 8.3e-09 64.3 112 41.1
FAN02G1968 Fragaria x ananassa HOM05D007296 ORTHO05D009201 1.1e-08 63.9 126 37.3
Sp6g29610 Schrenkiella parvula HOM05D007296 ORTHO05D009201 1.4e-08 63.5 135 35.6
AL6G25130 Arabidopsis lyrata HOM05D007296 ORTHO05D009201 3.1e-08 62.4 137 35.0
A10p24110 Brassica napus HOM05D007296 ORTHO05D009201 3.1e-08 62.4 103 38.8
BraA10t44476Z Brassica rapa HOM05D007296 ORTHO05D009201 3.1e-08 62.4 103 38.8
BolC9t59112H Brassica oleracea HOM05D007296 ORTHO05D009201 5.4e-08 61.6 103 38.8
Carub.0006s1259 Capsella rubella HOM05D007296 ORTHO05D009201 5.4e-08 61.6 138 32.6
C09p62750 Brassica napus HOM05D007296 ORTHO05D009201 1.2e-07 60.5 103 37.9
FAN05G3275 Fragaria x ananassa HOM05D007296 ORTHO05D009201 1.6e-07 60.1 139 32.4
Migut.K01416 Erythranthe guttata HOM05D007296 ORTHO05D009201 2.0e-07 59.7 109 40.4
Thhalv10014918m.g Eutrema salsugineum HOM05D007296 ORTHO05D009201 2.0e-07 59.7 103 38.8
SGA_v2.0_scaffold47G17522 Striga asiatica HOM05D000631 ORTHO05D000524 2.7e-07 59.3 109 36.7
BcaB08g36986 Brassica carinata HOM05D007296 ORTHO05D009201 5.9e-07 58.2 83 39.8
CARHR198900 Cardamine hirsuta HOM05D007296 ORTHO05D009201 7.7e-07 57.8 58 53.4
DCAR_015066 Daucus carota HOM05D007296 ORTHO05D009201 2.9e-06 55.8 104 34.6
RcHm_v2.0_Chr2g0173451 Rosa chinensis HOM05D007296 ORTHO05D009201 3.8e-06 55.5 134 38.1


User provided reference genes

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