Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G148300 Prunus persica HOM05D005591 ORTHO05D007131 4.8e-178 627.9 353 100.0
MD05G1209200 Malus domestica HOM05D005591 ORTHO05D007131 5.7e-155 551.2 353 88.4
MD10G1195600 Malus domestica HOM05D005591 ORTHO05D007131 1.6e-152 543.1 353 88.7
RcHm_v2.0_Chr5g0027591 Rosa chinensis HOM05D005591 ORTHO05D007131 3.0e-151 538.9 353 88.1
FAN16G2920 Fragaria x ananassa HOM05D005591 ORTHO05D007131 6.6e-151 537.7 353 88.7
FvH4_3g16560 Fragaria vesca HOM05D005591 ORTHO05D007131 7.3e-150 534.3 353 88.1
FAN11G3688 Fragaria x ananassa HOM05D005591 ORTHO05D007131 3.6e-149 531.9 353 87.8
FAN21G2901 Fragaria x ananassa HOM05D005591 ORTHO05D007131 1.4e-148 530.0 353 88.1
CiPaw.01G109900 Carya illinoinensis HOM05D005591 ORTHO05D007131 1.1e-140 503.8 352 73.6
Ciclev10020911m.g Citrus clementina HOM05D005591 ORTHO05D007131 7.8e-136 487.6 352 71.0
FAN25G3010 Fragaria x ananassa HOM05D005591 ORTHO05D007131 8.6e-135 484.2 353 83.3
Atru.chr7.136 Acer truncatum HOM05D005591 ORTHO05D007131 2.1e-133 479.6 352 78.1
CSS0046220 Camellia sinensis var. sinensis HOM05D005591 ORTHO05D007131 3.6e-133 478.8 352 70.5
Haze_12970 Corylus avellana HOM05D005591 ORTHO05D007131 2.0e-131 473.0 355 78.9
Gorai.011G147400 Gossypium raimondii HOM05D005591 ORTHO05D007131 2.6e-131 472.6 352 71.0
Actinidia35920 Actinidia chinensis HOM05D005591 ORTHO05D007131 1.7e-130 469.9 351 70.4
Dinv27163 Davidia involucrata HOM05D005591 ORTHO05D007131 2.9e-130 469.2 354 69.2
Duzib212G0264 Durio zibethinus HOM05D005591 ORTHO05D007131 2.9e-130 469.2 352 71.6
Potri.002G234400 Populus trichocarpa HOM05D005591 ORTHO05D007131 2.9e-130 469.2 354 70.3
CANSAT78G0984 Cannabis sativa HOM05D005591 ORTHO05D007131 4.9e-130 468.4 344 79.1
QL05p063015 Quercus lobata HOM05D005591 ORTHO05D007131 4.9e-130 468.4 352 69.3
Haze_05998 Corylus avellana HOM05D005591 ORTHO05D007131 1.2e-128 463.8 339 81.4
TWI34G1086 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 1.6e-128 463.4 352 67.3
Phvul.008G142801 Phaseolus vulgaris HOM05D005591 ORTHO05D007131 6.0e-128 461.5 354 69.8
Hma1.2p1_0349F.1_g132330 Hydrangea macrophylla HOM05D005591 ORTHO05D007131 2.3e-127 459.5 352 67.3
Glyma.20G208100 Glycine max HOM05D005591 ORTHO05D007131 5.1e-127 458.4 354 68.6
Eucgr.E02433 Eucalyptus grandis HOM05D005591 ORTHO05D007131 1.2e-125 453.8 356 74.4
Medtr3g005100 Medicago truncatula HOM05D005591 ORTHO05D007131 6.2e-125 451.4 353 67.7
Manes.16G070000 Manihot esculenta HOM05D005591 ORTHO05D007131 1.1e-124 450.7 352 68.8
GSVIVG01031642001 Vitis vinifera HOM05D005591 ORTHO05D007131 1.1e-124 450.7 352 68.2
VMungo0720G0134 Vigna mungo HOM05D005591 ORTHO05D007131 1.4e-124 450.3 354 68.6
TWI60G1035 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 2.4e-124 449.5 352 67.3
Cc11_g03530 Coffea canephora HOM05D005591 ORTHO05D007131 1.5e-123 446.8 355 74.1
TAR375G0642 Trochodendron aralioides HOM05D005591 ORTHO05D007131 2.0e-123 446.4 356 66.6
Thecc.04G188000 Theobroma cacao HOM05D005591 ORTHO05D007131 4.4e-123 445.3 320 73.4
arahy.Tifrunner.gnm1.ann1.ZABD6C Arachis hypogaea HOM05D005591 ORTHO05D007131 5.8e-123 444.9 327 70.3
Glyma.10G181900 Glycine max HOM05D005591 ORTHO05D007131 2.2e-122 443.0 354 67.2
Psat5g221840 Pisum sativum HOM05D005591 ORTHO05D007131 3.8e-122 442.2 353 66.9
Cfa014468 Carpinus fangiana HOM05D005591 ORTHO05D007131 4.9e-122 441.8 296 87.5
Gohir.A09G209100 Gossypium hirsutum HOM05D005591 ORTHO05D007131 6.4e-122 441.4 352 65.9
PGR083G2576 Punica granatum HOM05D005591 ORTHO05D007131 6.4e-122 441.4 357 66.7
Sabra02G0178800 Salix brachista HOM05D005591 ORTHO05D007131 1.4e-121 440.3 308 74.4
Lj2P1154T29 Lonicera japonica HOM05D005591 ORTHO05D007131 1.9e-121 439.9 315 71.4
Gohir.A10G133200 Gossypium hirsutum HOM05D005591 ORTHO05D007131 9.3e-121 437.6 352 66.8
Lalb_Chr12g0209371 Lupinus albus HOM05D005591 ORTHO05D007131 9.3e-121 437.6 366 65.0
Gorai.006G226400 Gossypium raimondii HOM05D005591 ORTHO05D007131 7.8e-120 434.5 352 64.5
ClCG00G002040 Citrullus lanatus HOM05D005591 ORTHO05D007131 3.0e-119 432.6 351 66.7
Sc08g0001750 Simmondsia chinensis HOM05D005591 ORTHO05D007131 3.0e-119 432.6 354 73.2
arahy.Tifrunner.gnm1.ann1.8VB164 Arachis hypogaea HOM05D005591 ORTHO05D007131 3.9e-119 432.2 302 72.8
MSTRG.18314 Avicennia marina HOM05D005591 ORTHO05D007131 3.3e-118 429.1 352 65.9
THA.LOC104827705 Tarenaya hassleriana HOM05D005591 ORTHO05D007131 4.3e-118 428.7 352 65.6
Ca_26812_v3 Cicer arietinum L. HOM05D005591 ORTHO05D007131 5.6e-118 428.3 353 65.7
TPR.G25529 Trifolium pratense HOM05D005591 ORTHO05D007131 5.6e-118 428.3 355 65.1
Gohir.D09G202500 Gossypium hirsutum HOM05D005591 ORTHO05D007131 7.3e-118 427.9 352 63.9
TPR.G37202 Trifolium pratense HOM05D005591 ORTHO05D007131 9.6e-118 427.6 353 64.9
Hund00109 Selenicereus undatus HOM05D005591 ORTHO05D007131 1.6e-117 426.8 337 74.2
Sed0000259 Sechium edule HOM05D005591 ORTHO05D007131 3.6e-117 425.6 344 66.3
CAN.G1648.2 Capsicum annuum HOM05D005591 ORTHO05D007131 4.8e-117 425.2 359 62.7
ECA232G4773 Erigeron canadensis HOM05D005591 ORTHO05D007131 4.8e-117 425.2 357 73.1
CsaV3_6G003160 Cucumis sativus L. HOM05D005591 ORTHO05D007131 6.2e-117 424.9 351 66.1
Lj3g0022648 Lotus japonicus HOM05D005591 ORTHO05D007131 6.2e-117 424.9 368 63.3
Solyc01g100250.3 Solanum lycopersicum HOM05D005591 ORTHO05D007131 1.4e-116 423.7 359 62.4
Lalb_Chr12g0205911 Lupinus albus HOM05D005591 ORTHO05D007131 3.1e-116 422.5 355 65.9
Oeu061431.3 Olea europaea HOM05D005591 ORTHO05D007131 1.2e-115 420.6 352 64.8
Rhsim02G0070200 Rhododendron simsii HOM05D005591 ORTHO05D007131 1.2e-115 420.6 353 71.7
CAN.G1273.6 Capsicum annuum HOM05D005591 ORTHO05D007131 2.0e-115 419.9 359 69.6
ClCG08G003960 Citrullus lanatus HOM05D005591 ORTHO05D007131 2.6e-115 419.5 306 71.9
MELO3C011502.2 Cucumis melo HOM05D005591 ORTHO05D007131 5.8e-115 418.3 351 65.8
Nitab4.5_0006072g0030 Nicotiana tabacum HOM05D005591 ORTHO05D007131 7.6e-115 417.9 359 63.8
PGSC0003DMG402024734 Solanum tuberosum HOM05D005591 ORTHO05D007131 7.6e-115 417.9 360 62.2
Nitab4.5_0000368g0340 Nicotiana tabacum HOM05D005591 ORTHO05D007131 2.9e-114 416.0 334 66.2
SalBow4G1474 Salvia bowleyana HOM05D005591 ORTHO05D007131 5.4e-113 411.8 316 69.3
Peaxi162Scf00673g00002 Petunia axillaris HOM05D005591 ORTHO05D007131 1.6e-112 410.2 346 64.2
SalBow4G1598 Salvia bowleyana HOM05D005591 ORTHO05D007131 1.6e-112 410.2 319 69.3
EL10Ac9g21576 Beta vulgaris HOM05D005591 ORTHO05D007131 2.1e-112 409.8 352 61.6
AUR62010234 Chenopodium quinoa HOM05D005591 ORTHO05D007131 7.9e-112 407.9 301 70.4
AUR62013219 Chenopodium quinoa HOM05D005591 ORTHO05D007131 1.8e-111 406.8 301 70.4
HanXRQChr10g0315741 Helianthus annuus HOM05D005591 ORTHO05D007131 1.8e-111 406.8 365 69.9
AT1G19800 Arabidopsis thaliana HOM05D005591 ORTHO05D007131 3.0e-111 406.0 353 60.9
Gohir.D10G133600 Gossypium hirsutum HOM05D005591 ORTHO05D007131 8.7e-111 404.4 352 64.5
PSO063G3984 Papaver somniferum HOM05D005591 ORTHO05D007131 8.7e-111 404.4 351 71.2
COL.COLO4_08690 Corchorus olitorius HOM05D005591 ORTHO05D007131 1.1e-110 404.1 312 69.9
MBI07_g20439_MAGBIO Magnolia biondii HOM05D005591 ORTHO05D007131 1.1e-110 404.1 306 69.9
Migut.D00413 Erythranthe guttata HOM05D005591 ORTHO05D007131 2.5e-110 402.9 304 78.3
PSO339G5872 Papaver somniferum HOM05D005591 ORTHO05D007131 2.5e-110 402.9 351 70.9
Thhalv10008071m.g Eutrema salsugineum HOM05D005591 ORTHO05D007131 5.6e-110 401.7 314 65.3
Nn3g18591 Nelumbo nucifera HOM05D005591 ORTHO05D007131 7.4e-110 401.4 294 71.8
CARHR020310 Cardamine hirsuta HOM05D005591 ORTHO05D007131 1.6e-109 400.2 357 60.2
Aqoxy5G02725 Aquilegia oxysepala HOM05D005591 ORTHO05D007131 2.8e-109 399.4 307 69.4
AL1G32520 Arabidopsis lyrata HOM05D005591 ORTHO05D007131 4.8e-109 398.7 353 60.1
Lsat_1_v5_gn_1_5881 Lactuca sativa HOM05D005591 ORTHO05D007131 4.8e-109 398.7 305 74.1
Carub.0001s1933 Capsella rubella HOM05D005591 ORTHO05D007131 1.4e-108 397.1 355 60.3
C08p19710 Brassica napus HOM05D005591 ORTHO05D007131 2.4e-108 396.4 360 59.2
BcaB03g12900 Brassica carinata HOM05D005591 ORTHO05D007131 4.0e-108 395.6 315 65.4
Sp1g17610 Schrenkiella parvula HOM05D005591 ORTHO05D007131 4.0e-108 395.6 297 68.0
Aa31LG7G4330 Aethionema arabicum HOM05D005591 ORTHO05D007131 6.9e-108 394.8 332 63.3
BolC8t49608H Brassica oleracea HOM05D005591 ORTHO05D007131 9.0e-108 394.4 348 60.1
BcaC07g38997 Brassica carinata HOM05D005591 ORTHO05D007131 2.6e-107 392.9 315 64.8
SGA_v2.0_scaffold90G27691 Striga asiatica HOM05D005591 ORTHO05D007131 2.6e-107 392.9 320 64.7
CDE02G1973 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 3.8e-106 389.0 293 77.5
SGA_v2.0_scaffold1G00602 Striga asiatica HOM05D005591 ORTHO05D002031 4.9e-106 388.7 320 64.1
C05p18230 Brassica napus HOM05D005591 ORTHO05D007131 6.4e-106 388.3 295 68.1
BraA06t24698Z Brassica rapa HOM05D005591 ORTHO05D007131 1.4e-105 387.1 295 68.5
A06p15920 Brassica napus HOM05D005591 ORTHO05D007131 2.4e-105 386.3 290 69.3
BolC5t30530H Brassica oleracea HOM05D005591 ORTHO05D007131 3.2e-105 386.0 295 68.1
ATR0681G262 Amborella trichopoda HOM05D005591 ORTHO05D007131 2.8e-101 372.9 271 71.6
SHI22008 Sapria himalayana HOM05D005591 ORTHO05D007131 4.8e-101 372.1 313 64.5
Sopen01g043760 Solanum pennellii HOM05D005591 ORTHO05D007131 1.2e-99 367.5 326 60.1
Duzib151G0749 Durio zibethinus HOM05D005591 ORTHO05D007131 2.1e-96 356.7 244 77.5
SEGI_17332 Sequoiadendron giganteum HOM05D005591 ORTHO05D007131 3.0e-95 352.8 287 64.8
SMO367G0743 Selaginella moellendorffii HOM05D005591 ORTHO05D007131 2.4e-92 343.2 283 62.9
Pp3c1_16480 Physcomitrium patens HOM05D005591 ORTHO05D007131 5.0e-90 335.5 282 63.8
Zm00001eb074560 Zea mays HOM05D005591 ORTHO05D007131 1.1e-89 334.3 262 67.6
Os04g0553000 Oryza sativa ssp. japonica HOM05D005591 ORTHO05D007131 7.2e-89 331.6 256 68.8
Mapoly0204s0010 Marchantia polymorpha HOM05D005591 ORTHO05D007131 3.6e-88 329.3 285 60.7
CBR_g24384 Chara braunii HOM05D005591 ORTHO05D007131 8.7e-87 324.7 306 58.5
BcaB07g31994 Brassica carinata HOM05D005591 ORTHO05D007131 1.1e-86 324.3 295 60.0
Medtr3g008040 Medicago truncatula HOM05D005591 ORTHO05D007131 1.9e-86 323.6 353 55.0
HPP92_028331 Vanilla planifolia HOM05D005591 ORTHO05D007131 1.4e-84 317.4 269 74.0
AagrBONN_evm.TU.Sc2ySwM_117.3947 Anthoceros agrestis HOM05D005591 ORTHO05D007131 2.9e-82 309.7 244 68.4
Cre06.g268200 Chlamydomonas reinhardtii HOM05D005591 ORTHO05D007131 6.5e-74 282.0 254 56.3
PRCOL_00005194 Prasinoderma coloniale HOM05D005591 ORTHO05D007131 1.3e-69 267.7 252 55.2
Cpa.g.sc8.310 Carica papaya HOM05D005591 ORTHO05D007131 2.7e-64 250.0 177 76.8
CDE11G0925 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 8.0e-64 248.4 147 87.8
MCO01G348 Micromonas commoda HOM05D005591 ORTHO05D007131 2.0e-62 243.8 266 50.0
vmacro15598 Vaccinium macrocarpon HOM05D005591 ORTHO05D007131 1.9e-57 227.3 307 45.9
CBR_g4088 Chara braunii HOM05D005591 ORTHO05D007131 5.9e-51 205.7 143 74.1
unitig_22.g5460 Utricularia gibba HOM05D005591 ORTHO05D007131 1.7e-50 204.1 207 52.7
unitig_22.g5461 Utricularia gibba HOM05D005591 ORTHO05D007131 9.5e-41 171.8 100 86.0
DCAR_018469 Daucus carota HOM05D005591 ORTHO05D007131 4.9e-37 159.5 101 79.2
DCAR_018470 Daucus carota HOM05D005591 ORTHO05D007131 4.9e-37 159.5 101 79.2
BraA08t34904Z Brassica rapa HOM05D005591 ORTHO05D011946 5.2e-31 139.4 102 63.7
CBR_g4089 Chara braunii HOM05D005591 ORTHO05D007131 1.6e-27 127.9 84 67.9
BcaC05g25857 Brassica carinata HOM05D005591 ORTHO05D007131 9.2e-20 102.1 59 86.4
Actinidia29179 Actinidia chinensis HOM05D005591 ORTHO05D007131 3.5e-19 100.1 225 34.2
Cc01_g18470 Coffea canephora HOM05D005591 ORTHO05D007131 1.3e-10 71.6 45 68.9


User provided reference genes

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