Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G073200 Prunus persica HOM05D014736 ORTHO05D009761 1.9e-155 552.7 339 100.0
MD10G1268000 Malus domestica HOM05D014736 ORTHO05D009761 7.2e-62 241.9 269 60.2
MD05G1292200 Malus domestica HOM05D014736 ORTHO05D009761 2.2e-55 220.3 246 61.0
QL05p060720 Quercus lobata HOM05D009013 ORTHO05D009761 3.6e-45 186.4 342 40.6
CiPaw.10G096600 Carya illinoinensis HOM05D009013 ORTHO05D009761 6.3e-42 175.6 361 37.7
FAN25G1841 Fragaria x ananassa HOM05D014736 ORTHO05D009761 2.9e-39 166.8 372 40.3
Haze_05479 Corylus avellana HOM05D009013 ORTHO05D009761 3.2e-38 163.3 337 40.4
FAN11G2258 Fragaria x ananassa HOM05D014736 ORTHO05D009761 4.7e-37 159.5 401 37.9
Cfa001036 Carpinus fangiana HOM05D009013 ORTHO05D009761 1.2e-35 154.8 329 40.7
Ciclev10017480m.g Citrus clementina HOM05D009852 ORTHO05D009761 5.7e-35 152.5 320 36.6
FvH4_3g06440 Fragaria vesca HOM05D014736 ORTHO05D009761 7.5e-35 152.1 397 38.3
FAN21G2246 Fragaria x ananassa HOM05D014736 ORTHO05D009761 9.7e-35 151.8 181 51.9
Lalb_Chr07g0186121 Lupinus albus HOM05D009013 ORTHO05D009761 1.0e-31 141.7 311 35.7
RcHm_v2.0_Chr5g0012861 Rosa chinensis HOM05D014736 ORTHO05D009761 1.1e-30 138.3 334 43.1
CANSAT35G0309 Cannabis sativa HOM05D009013 ORTHO05D009761 5.5e-30 136.0 342 47.4
Lj4g0005206 Lotus japonicus HOM05D009013 ORTHO05D009761 9.4e-30 135.2 346 36.1
Thecc.06G158200 Theobroma cacao HOM05D009852 ORTHO05D009761 3.4e-27 126.7 342 43.3
Manes.15G116600 Manihot esculenta HOM05D009852 ORTHO05D009761 9.8e-27 125.2 397 35.5
Glyma.09G085700 Glycine max HOM05D009013 ORTHO05D009761 1.3e-26 124.8 346 36.7
TWI73G0525 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 2.2e-26 124.0 342 31.6
Dinv03635 Davidia involucrata HOM05D009013 ORTHO05D009761 1.4e-25 121.3 377 33.2
Lalb_Chr12g0204801 Lupinus albus HOM05D009013 ORTHO05D009761 9.1e-25 118.6 313 33.2
Gohir.D05G154000 Gossypium hirsutum HOM05D009852 ORTHO05D009761 4.5e-24 116.3 344 41.9
Gorai.009G158300 Gossypium raimondii HOM05D009852 ORTHO05D009761 4.5e-24 116.3 344 41.9
CiPaw.09G129900 Carya illinoinensis HOM05D009013 ORTHO05D009761 1.0e-23 115.2 499 27.5
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 1.3e-23 114.8 348 34.5
VMungo1309G2255 Vigna mungo HOM05D009013 ORTHO05D009761 1.7e-23 114.4 343 34.4
Duzib192G0106 Durio zibethinus HOM05D009852 ORTHO05D009761 2.3e-23 114.0 361 37.1
Atru.chr10.1414 Acer truncatum HOM05D009852 ORTHO05D009761 1.1e-22 111.7 325 32.3
Glyma.08G121600 Glycine max HOM05D009013 ORTHO05D009761 1.5e-22 111.3 319 33.2
Lalb_Chr13g0295461 Lupinus albus HOM05D009013 ORTHO05D009761 2.5e-22 110.5 292 32.2
FAN16G2400 Fragaria x ananassa HOM05D014736 ORTHO05D009761 5.5e-22 109.4 154 48.1
Duzib160G0535 Durio zibethinus HOM05D009852 ORTHO05D009761 1.2e-21 108.2 353 36.0
Potri.011G077700 Populus trichocarpa HOM05D009852 ORTHO05D009761 1.2e-21 108.2 376 30.3
Duzib235G1088 Durio zibethinus HOM05D009852 ORTHO05D009761 1.6e-21 107.8 409 33.3
Manes.17G064400 Manihot esculenta HOM05D009852 ORTHO05D009761 1.6e-21 107.8 372 31.7
Gohir.A05G151600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 1.4e-20 104.8 342 41.5
Potri.001G354600 Populus trichocarpa HOM05D009852 ORTHO05D009761 1.4e-20 104.8 362 38.4
TWI09G1113 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 1.8e-20 104.4 341 29.0
Lj6g0000102 Lotus japonicus HOM05D009013 ORTHO05D009761 4.0e-20 103.2 365 31.0
TWI09G0214 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 6.8e-20 102.4 341 28.7
Glyma.05G164200 Glycine max HOM05D009013 ORTHO05D009761 9.8e-19 98.6 312 30.8
COL.COLO4_22804 Corchorus olitorius HOM05D009852 ORTHO05D009761 8.3e-18 95.5 309 35.9
Gohir.D06G140600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 2.4e-17 94.0 357 33.6
Hma1.2p1_0015F.1_g010420 Hydrangea macrophylla HOM05D009013 ORTHO05D009761 2.4e-17 94.0 330 31.8
Gorai.010G164100 Gossypium raimondii HOM05D009852 ORTHO05D009761 5.4e-17 92.8 357 33.6
Glyma.15G195700 Glycine max HOM05D009013 ORTHO05D009761 2.7e-16 90.5 348 32.5
Phvul.002G244200 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 4.5e-16 89.7 346 30.3
VMungo0251G0903 Vigna mungo HOM05D009013 ORTHO05D009761 7.8e-16 89.0 346 30.3
arahy.Tifrunner.gnm1.ann1.5V604V Arachis hypogaea HOM05D009013 ORTHO05D009761 2.9e-15 87.0 352 31.5
arahy.Tifrunner.gnm1.ann1.3YWF5K Arachis hypogaea HOM05D009013 ORTHO05D009761 5.0e-15 86.3 342 31.3
Lalb_Chr23g0275971 Lupinus albus HOM05D009013 ORTHO05D009761 5.0e-15 86.3 344 29.1
Lalb_Chr08g0233301 Lupinus albus HOM05D009013 ORTHO05D009761 9.5e-14 82.0 350 28.9
Psat1g018200 Pisum sativum HOM05D009013 ORTHO05D009761 1.2e-13 81.6 318 28.6
Sed0006555 Sechium edule HOM05D022667 ORTHO05D009761 4.0e-12 76.6 340 31.8
CSS0047309 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 1.3e-10 71.6 407 24.1
TPR.G31355 Trifolium pratense HOM05D009013 ORTHO05D009761 1.7e-10 71.2 290 31.4
MELO3C007172.2 Cucumis melo HOM05D022667 ORTHO05D009761 6.4e-10 69.3 339 30.7
Eucgr.D00345 Eucalyptus grandis HOM05D014736 ORTHO05D009761 6.4e-10 69.3 195 31.8
Sabra11G0072300 Salix brachista HOM05D009852 ORTHO05D009761 8.3e-10 68.9 208 37.0
ClCG01G024180 Citrullus lanatus HOM05D022667 ORTHO05D009761 1.1e-09 68.6 339 32.4
ECA248G0823 Erigeron canadensis HOM05D038653 ORTHO05D020580 1.9e-09 67.8 299 28.1
Sed0023686 Sechium edule HOM05D022667 ORTHO05D009761 1.9e-09 67.8 340 31.2
AT1G29530 Arabidopsis thaliana HOM05D008719 ORTHO05D010898 7.0e-09 65.9 149 34.2
TPR.G22001 Trifolium pratense HOM05D009013 ORTHO05D009761 7.0e-09 65.9 329 27.1
Ca_25278_v3 Cicer arietinum L. HOM05D009013 ORTHO05D009761 1.2e-08 65.1 320 28.1
Medtr2g049330 Medicago truncatula HOM05D009013 ORTHO05D009761 1.2e-08 65.1 314 29.3
CsaV3_6G051330 Cucumis sativus L. HOM05D022667 ORTHO05D009761 1.6e-08 64.7 339 30.4
CSS0045433 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 2.7e-08 63.9 444 24.5
Glyma.13G051300 Glycine max HOM05D009013 ORTHO05D009761 3.5e-08 63.5 47 59.6
Sabra16G0233200 Salix brachista HOM05D009852 ORTHO05D009761 7.8e-08 62.4 315 27.0
EL10Ac8g19799 Beta vulgaris HOM05D018558 ORTHO05D018254 1.0e-07 62.0 344 24.1
DCAR_003953 Daucus carota HOM05D009013 ORTHO05D009761 1.7e-07 61.2 378 26.2
Oeu046855.1 Olea europaea HOM05D012266 ORTHO05D011876 2.3e-07 60.8 334 25.7
DCAR_007913 Daucus carota HOM05D009013 ORTHO05D009761 3.9e-07 60.1 278 32.0
Medtr6g068870 Medicago truncatula HOM05D009013 ORTHO05D009761 1.5e-06 58.2 172 30.8
Oeu001056.1 Olea europaea HOM05D012266 ORTHO05D011876 2.5e-06 57.4 326 28.2
Gohir.A10G031700 Gossypium hirsutum HOM05D009852 ORTHO05D009761 4.3e-06 56.6 341 29.3
AL1G43370 Arabidopsis lyrata HOM05D008719 ORTHO05D010898 5.6e-06 56.2 148 30.4
Gohir.D10G032500 Gossypium hirsutum HOM05D009852 ORTHO05D009761 5.6e-06 56.2 96 35.4
Gorai.011G034400 Gossypium raimondii HOM05D009852 ORTHO05D009761 5.6e-06 56.2 96 35.4
PSO541G1916 Papaver somniferum HOM05D022831 ORTHO05D023597 7.3e-06 55.8 118 31.4


User provided reference genes

Program Settings