Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G044600 Prunus persica HOM05D005665 ORTHO05D007230 1.5e-200 702.6 333 100.0
RcHm_v2.0_Chr5g0008091 Rosa chinensis HOM05D005665 ORTHO05D007230 1.9e-184 649.0 333 92.8
FvH4_3g04930 Fragaria vesca HOM05D005665 ORTHO05D007230 1.6e-183 646.0 333 92.2
FAN11G2254 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.6e-183 646.0 333 92.2
MD10G1295900 Malus domestica HOM05D005665 ORTHO05D007230 2.1e-183 645.6 328 94.2
FAN21G3875 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.7e-180 636.0 333 91.0
FAN25G3768 Fragaria x ananassa HOM05D005665 ORTHO05D007230 2.9e-180 635.2 333 91.3
FAN16G3723 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.6e-178 629.4 333 90.4
Cfa000422 Carpinus fangiana HOM05D005665 ORTHO05D007230 4.3e-176 621.3 324 88.9
CiPaw.10G047200 Carya illinoinensis HOM05D005665 ORTHO05D007230 1.2e-175 619.8 326 89.0
Thecc.06G190100 Theobroma cacao HOM05D005665 ORTHO05D007230 2.8e-175 618.6 325 89.5
ClCG03G005940 Citrullus lanatus HOM05D005665 ORTHO05D007230 1.5e-173 612.8 322 88.8
Actinidia05618 Actinidia chinensis HOM05D005665 ORTHO05D007230 2.6e-173 612.1 318 90.3
QL05p039803 Quercus lobata HOM05D005665 ORTHO05D007230 4.4e-173 611.3 320 88.8
CsaV3_1G012180 Cucumis sativus L. HOM05D005665 ORTHO05D007230 7.5e-173 610.5 322 88.2
Actinidia01890 Actinidia chinensis HOM05D005665 ORTHO05D007230 1.7e-172 609.4 315 90.5
TWI38G1053 Tripterygium wilfordii HOM05D005665 ORTHO05D007230 2.2e-172 609.0 325 88.0
MELO3C002591.2 Cucumis melo HOM05D005665 ORTHO05D007230 2.4e-171 605.5 322 87.3
Dinv07542 Davidia involucrata HOM05D005665 ORTHO05D007230 2.4e-171 605.5 318 89.0
Manes.16G026000 Manihot esculenta HOM05D005665 ORTHO05D007230 2.4e-171 605.5 321 87.9
Duzib192G0757 Durio zibethinus HOM05D005665 ORTHO05D007230 4.1e-171 604.7 323 87.3
Cpa.g.sc27.60 Carica papaya HOM05D005665 ORTHO05D007230 5.4e-171 604.4 320 87.5
Duzib160G0567 Durio zibethinus HOM05D005665 ORTHO05D007230 5.4e-171 604.4 329 88.1
CiPaw.09G058000 Carya illinoinensis HOM05D005665 ORTHO05D007230 9.2e-171 603.6 325 86.8
Manes.17G043900 Manihot esculenta HOM05D005665 ORTHO05D007230 3.5e-170 601.7 330 86.4
TAR626G1890 Trochodendron aralioides HOM05D005665 ORTHO05D007230 4.6e-170 601.3 322 86.0
CSS0000582 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 6.0e-170 600.9 315 87.6
Gorai.011G026500 Gossypium raimondii HOM05D005665 ORTHO05D007230 7.8e-170 600.5 331 85.8
Ciclev10015896m.g Citrus clementina HOM05D005665 ORTHO05D007230 1.0e-169 600.1 321 86.6
Hma1.2p1_0126F.1_g059290 Hydrangea macrophylla HOM05D005665 ORTHO05D007230 1.3e-169 599.7 319 87.8
Potri.011G050800 Populus trichocarpa HOM05D005665 ORTHO05D007230 1.3e-169 599.7 314 88.9
Gohir.A10G024500 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.7e-169 599.4 331 85.2
Gohir.D10G025200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.7e-169 599.4 319 87.5
TAR627G0371 Trochodendron aralioides HOM05D005665 ORTHO05D007230 2.3e-169 599.0 320 86.9
Eucgr.E03124 Eucalyptus grandis HOM05D005665 ORTHO05D007230 5.1e-169 597.8 317 87.7
Peaxi162Scf00461g00010 Petunia axillaris HOM05D005665 ORTHO05D007230 5.1e-169 597.8 323 87.0
Carub.0006s3285 Capsella rubella HOM05D005665 ORTHO05D007230 8.6e-169 597.0 332 84.3
THA.LOC104812890 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 1.1e-168 596.7 329 86.0
Nn1g04043 Nelumbo nucifera HOM05D005665 ORTHO05D007230 2.5e-168 595.5 313 87.5
AT4G04930 Arabidopsis thaliana HOM05D005665 ORTHO05D007230 4.3e-168 594.7 333 84.4
CANSAT35G1141 Cannabis sativa HOM05D005665 ORTHO05D007230 5.6e-168 594.3 318 88.7
Migut.M01155 Erythranthe guttata HOM05D005665 ORTHO05D007230 9.5e-168 593.6 329 85.7
Sabra11G0034800 Salix brachista HOM05D005665 ORTHO05D007230 1.2e-167 593.2 314 87.6
Thhalv10028789m.g Eutrema salsugineum HOM05D005665 ORTHO05D007230 1.6e-167 592.8 329 83.9
Nitab4.5_0013250g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.6e-167 592.8 324 86.4
THA.LOC104806290 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 1.6e-167 592.8 335 84.5
Haze_06494 Corylus avellana HOM05D005665 ORTHO05D007230 2.8e-167 592.0 382 74.9
Nn1g06596 Nelumbo nucifera HOM05D005665 ORTHO05D007230 6.2e-167 590.9 329 83.6
Nitab4.5_0003942g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 6.2e-167 590.9 322 86.6
Sed0027057 Sechium edule HOM05D005665 ORTHO05D007230 6.2e-167 590.9 318 87.1
BolC9t56129H Brassica oleracea HOM05D005665 ORTHO05D007230 8.1e-167 590.5 329 84.8
Lj2A287T49 Lonicera japonica HOM05D005665 ORTHO05D007230 8.1e-167 590.5 321 85.7
AUR62014800 Chenopodium quinoa HOM05D005665 ORTHO05D007230 1.1e-166 590.1 324 85.8
AUR62016991 Chenopodium quinoa HOM05D005665 ORTHO05D007230 1.1e-166 590.1 329 84.5
Sp6g04030 Schrenkiella parvula HOM05D005665 ORTHO05D007230 1.4e-166 589.7 329 84.5
SpUn0051_0010 Schrenkiella parvula HOM05D005665 ORTHO05D007230 1.4e-166 589.7 329 84.5
Aqoxy4G01024 Aquilegia oxysepala HOM05D005665 ORTHO05D007230 5.2e-166 587.8 319 83.7
MSTRG.7328 Avicennia marina HOM05D005665 ORTHO05D007230 5.2e-166 587.8 323 84.8
A09p25970 Brassica napus HOM05D005665 ORTHO05D007230 5.2e-166 587.8 329 84.2
BraA09t38164Z Brassica rapa HOM05D005665 ORTHO05D007230 5.2e-166 587.8 329 84.2
Peaxi162Scf00530g00218 Petunia axillaris HOM05D005665 ORTHO05D007230 6.8e-166 587.4 326 85.3
Lj6g0021271 Lotus japonicus HOM05D005665 ORTHO05D007230 8.9e-166 587.0 327 85.3
Solyc10g009030.4 Solanum lycopersicum HOM05D005665 ORTHO05D007230 2.0e-165 585.9 324 85.2
Nitab4.5_0004775g0030 Nicotiana tabacum HOM05D005665 ORTHO05D007230 3.4e-165 585.1 326 84.7
Sopen10g004810 Solanum pennellii HOM05D005665 ORTHO05D007230 4.4e-165 584.7 324 85.2
Medtr2g013070 Medicago truncatula HOM05D005665 ORTHO05D007230 7.5e-165 583.9 328 84.1
SalBow7G1156 Salvia bowleyana HOM05D005665 ORTHO05D007230 7.5e-165 583.9 317 84.2
PGSC0003DMG400022827 Solanum tuberosum HOM05D005665 ORTHO05D007230 7.5e-165 583.9 324 85.2
Gohir.A06G126400 Gossypium hirsutum HOM05D005665 ORTHO05D007230 9.9e-165 583.6 331 83.4
Oeu053967.2 Olea europaea HOM05D005665 ORTHO05D007230 9.9e-165 583.6 319 85.6
Cc02_g13170 Coffea canephora HOM05D005665 ORTHO05D007230 1.3e-164 583.2 310 85.8
Gohir.D06G131200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.3e-164 583.2 331 83.4
Lalb_Chr18g0059701 Lupinus albus HOM05D005665 ORTHO05D007230 1.3e-164 583.2 318 86.8
Nitab4.5_0005615g0050 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.3e-164 583.2 324 85.5
BcaC04g21346 Brassica carinata HOM05D005665 ORTHO05D007230 2.2e-164 582.4 329 83.6
C09p32940 Brassica napus HOM05D005665 ORTHO05D007230 2.2e-164 582.4 329 83.6
PSO210G3809 Papaver somniferum HOM05D005665 ORTHO05D007230 2.2e-164 582.4 316 83.9
PSO832G3519 Papaver somniferum HOM05D005665 ORTHO05D007230 2.2e-164 582.4 316 83.9
Sed0024618 Sechium edule HOM05D005665 ORTHO05D007230 2.2e-164 582.4 323 84.8
Gorai.010G153100 Gossypium raimondii HOM05D005665 ORTHO05D007230 3.7e-164 581.6 319 85.3
SGA_v2.0_scaffold22G09724 Striga asiatica HOM05D005665 ORTHO05D007230 3.7e-164 581.6 323 83.6
ClCG01G022870 Citrullus lanatus HOM05D005665 ORTHO05D007230 6.4e-164 580.9 319 84.3
PGR042G0011 Punica granatum HOM05D005665 ORTHO05D007230 6.4e-164 580.9 321 83.8
Ca_00306_v3 Cicer arietinum L. HOM05D005665 ORTHO05D007230 1.1e-163 580.1 314 86.3
TPR.G36824 Trifolium pratense HOM05D005665 ORTHO05D007230 2.4e-163 578.9 323 84.2
GSVIVG01002020001 Vitis vinifera HOM05D005665 ORTHO05D007230 3.2e-163 578.6 310 85.8
COL.COLO4_31496 Corchorus olitorius HOM05D005665 ORTHO05D007230 7.1e-163 577.4 300 90.3
EL10Ac8g20360 Beta vulgaris HOM05D005665 ORTHO05D007230 9.2e-163 577.0 329 82.7
Os02g0639600 Oryza sativa ssp. japonica HOM05D005665 ORTHO05D007230 9.2e-163 577.0 318 83.0
Sc05g0007780 Simmondsia chinensis HOM05D005665 ORTHO05D007230 1.2e-162 576.6 322 82.9
Atru.chr10.1913 Acer truncatum HOM05D005665 ORTHO05D007230 7.8e-162 573.9 324 82.7
ATR0680G322 Amborella trichopoda HOM05D005665 ORTHO05D007230 1.7e-161 572.8 315 81.9
BcaB01g01848 Brassica carinata HOM05D005665 ORTHO05D007230 1.9e-160 569.3 326 83.1
Glyma.15G072800 Glycine max HOM05D005665 ORTHO05D007230 1.2e-159 566.6 324 81.8
MBI18_g16999_MAGBIO Magnolia biondii HOM05D005665 ORTHO05D007230 4.7e-159 564.7 323 82.4
Zm00001eb075800 Zea mays HOM05D005665 ORTHO05D007230 8.1e-159 563.9 321 79.1
Psat1g206640 Pisum sativum HOM05D005665 ORTHO05D007230 1.4e-158 563.1 328 82.3
Phvul.006G187100 Phaseolus vulgaris HOM05D005665 ORTHO05D007230 1.5e-157 559.7 327 80.7
VMungo0540G1872 Vigna mungo HOM05D005665 ORTHO05D007230 1.5e-157 559.7 324 81.5
Aa31LG9G9560 Aethionema arabicum HOM05D005665 ORTHO05D007230 1.3e-156 556.6 318 80.5
Glyma.13G240700 Glycine max HOM05D005665 ORTHO05D007230 3.2e-155 552.0 324 79.6
SHI01876 Sapria himalayana HOM05D005665 ORTHO05D007230 3.3e-152 542.0 346 74.9
arahy.Tifrunner.gnm1.ann1.5IXZ6F Arachis hypogaea HOM05D005665 ORTHO05D007230 2.8e-151 538.9 331 77.3
arahy.Tifrunner.gnm1.ann1.C923ZL Arachis hypogaea HOM05D005665 ORTHO05D007230 8.1e-151 537.3 331 77.0
Ah.09g237240 Amaranthus hybridus HOM05D005665 ORTHO05D007230 5.8e-149 531.2 294 83.0
SEGI_10058 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 3.2e-147 525.4 307 78.5
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 4.6e-146 521.5 294 80.3
Eucgr.L02776 Eucalyptus grandis HOM05D005665 ORTHO05D007230 6.0e-146 521.2 277 87.4
Lsat_1_v5_gn_1_126041 Lactuca sativa HOM05D005665 ORTHO05D007230 2.5e-144 515.8 311 75.2
HPP92_021012 Vanilla planifolia HOM05D005665 ORTHO05D007230 2.1e-143 512.7 326 74.5
Nitab4.5_0002158g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 3.4e-141 505.4 307 78.5
RhsimUnG0044900 Rhododendron simsii HOM05D005665 ORTHO05D007230 5.8e-141 504.6 267 86.9
MD05G1314600 Malus domestica HOM05D005665 ORTHO05D007230 2.4e-139 499.2 338 72.8
CAN.G413.22 Capsicum annuum HOM05D005665 ORTHO05D007230 1.6e-138 496.5 266 86.8
Mapoly0083s0054 Marchantia polymorpha HOM05D005665 ORTHO05D007230 3.3e-136 488.8 318 70.4
Pp3c23_19370 Physcomitrium patens HOM05D005665 ORTHO05D007230 1.3e-129 466.8 340 65.6
Pp3c23_19371 Physcomitrium patens HOM05D005665 ORTHO05D007230 1.3e-129 466.8 340 65.6
SMO364G0702 Selaginella moellendorffii HOM05D005665 ORTHO05D007230 1.8e-129 466.5 312 67.0
AagrBONN_evm.TU.Sc2ySwM_344.2491 Anthoceros agrestis HOM05D005665 ORTHO05D007230 2.5e-128 462.6 309 68.0
DCAR_004082 Daucus carota HOM05D005665 ORTHO05D007230 4.9e-124 448.4 251 81.3
AagrBONN_evm.TU.Sc2ySwM_344.2084 Anthoceros agrestis HOM05D005665 ORTHO05D007230 2.5e-120 436.0 311 62.7
CSS0037689 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 1.7e-116 423.3 230 87.4
CDE02G1299 Ceratophyllum demersum HOM05D005665 ORTHO05D007230 7.4e-104 381.3 246 72.0
MCO04G319 Micromonas commoda HOM05D005665 ORTHO05D007230 7.4e-104 381.3 323 57.6
unitig_21.g20852 Utricularia gibba HOM05D005665 ORTHO05D007230 4.4e-96 355.5 215 77.2
PRCOL_00001033 Prasinoderma coloniale HOM05D005665 ORTHO05D007230 4.2e-91 339.0 318 50.9
Cfa021982 Carpinus fangiana HOM05D005665 ORTHO05D007230 5.2e-81 305.4 350 43.7
Haze_26717 Corylus avellana HOM05D005665 ORTHO05D007230 8.3e-71 271.6 360 40.6
Thecc.05G195100 Theobroma cacao HOM05D005665 ORTHO05D007230 1.4e-54 217.6 123 78.9
Dinv40542 Davidia involucrata HOM05D005665 ORTHO05D007230 3.3e-35 153.3 82 87.8
MELO3C007292.2 Cucumis melo HOM05D005665 ORTHO05D039877 3.8e-31 139.8 89 77.5
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.4e-22 110.5 84 67.9
BcaB05g23333 Brassica carinata HOM05D005665 ORTHO05D039877 1.3e-20 104.8 68 72.1
Zm00001eb175420 Zea mays HOM05D005665 ORTHO05D007230 2.2e-15 87.4 45 84.4
Thecc.05G194800 Theobroma cacao HOM05D005665 ORTHO05D007230 6.5e-15 85.9 68 66.2
DCAR_004083 Daucus carota HOM05D000799 ORTHO05D000629 1.4e-14 84.7 50 76.0
Zm00001eb423550 Zea mays HOM05D005665 ORTHO05D007230 2.5e-14 84.0 41 87.8
SEGI_41581 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 6.9e-09 65.9 42 64.3


User provided reference genes

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