Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G169300 Prunus persica HOM05D000667 ORTHO05D009057 3.1e-52 208.0 93 100.0
Prupe.2G168500 Prunus persica HOM05D000667 ORTHO05D009057 2.0e-35 152.1 71 90.1
Psat4g155040 Pisum sativum HOM05D000667 ORTHO05D009057 2.4e-28 128.6 65 80.0
Ca_23642_v3 Cicer arietinum L. HOM05D000667 ORTHO05D009057 5.4e-28 127.5 82 67.1
Thecc.01G360100 Theobroma cacao HOM05D000667 ORTHO05D009057 1.0e-26 123.2 65 80.0
vmacro13280 Vaccinium macrocarpon HOM05D000667 ORTHO05D009057 5.1e-26 120.9 66 77.3
HanXRQChr17g0561611 Helianthus annuus HOM05D000667 ORTHO05D009057 6.6e-26 120.6 65 76.9
Medtr8g030940 Medicago truncatula HOM05D000667 ORTHO05D009057 1.9e-25 119.0 65 75.4
Lsat_1_v5_gn_4_36160 Lactuca sativa HOM05D000667 ORTHO05D009057 2.1e-24 115.5 66 69.7
Lj3g0007984 Lotus japonicus HOM05D000667 ORTHO05D009057 4.7e-24 114.4 65 73.8
Migut.B01745 Erythranthe guttata HOM05D000667 ORTHO05D009057 6.2e-24 114.0 65 73.8
AUR62004347 Chenopodium quinoa HOM05D000667 ORTHO05D009057 1.5e-22 109.4 66 71.2
AUR62022553 Chenopodium quinoa HOM05D000667 ORTHO05D009057 2.6e-22 108.6 66 71.2
ECA234G4497 Erigeron canadensis HOM05D000667 ORTHO05D009057 2.6e-22 108.6 66 66.7
Glyma.07G071400 Glycine max HOM05D000667 ORTHO05D009057 4.9e-21 104.4 64 71.9
Sabra14G0060400 Salix brachista HOM05D000667 ORTHO05D009057 1.1e-20 103.2 61 70.5
TPR.G15029 Trifolium pratense HOM05D000667 ORTHO05D009057 1.1e-20 103.2 82 56.1
MELO3C006114.2 Cucumis melo HOM05D000667 ORTHO05D009057 2.4e-20 102.1 64 68.8
Ciclev10020824m.g Citrus clementina HOM05D000667 ORTHO05D009057 3.2e-20 101.7 64 70.3
Potri.014G083200 Populus trichocarpa HOM05D000667 ORTHO05D009057 5.4e-20 100.9 61 68.9
AL5G43610 Arabidopsis lyrata HOM05D000667 ORTHO05D009057 1.0e-18 96.7 65 67.7
Sp5g02050 Schrenkiella parvula HOM05D000667 ORTHO05D009057 1.7e-18 95.9 65 66.2
AT3G61350 Arabidopsis thaliana HOM05D000667 ORTHO05D009057 2.3e-18 95.5 65 66.2
A07p25440 Brassica napus HOM05D000667 ORTHO05D009057 2.3e-18 95.5 66 65.2
BraA07t30188Z Brassica rapa HOM05D000667 ORTHO05D009057 2.3e-18 95.5 66 65.2
Thhalv10006061m.g Eutrema salsugineum HOM05D000667 ORTHO05D009057 3.0e-18 95.1 63 66.7
BcaB02g07380 Brassica carinata HOM05D000667 ORTHO05D009057 6.6e-18 94.0 65 63.1
C06p27390 Brassica napus HOM05D000667 ORTHO05D009057 6.6e-18 94.0 65 63.1
Carub.0005s2802 Capsella rubella HOM05D000667 ORTHO05D009057 6.6e-18 94.0 65 63.1
BcaC08g45119 Brassica carinata HOM05D000667 ORTHO05D009057 8.6e-18 93.6 65 64.6
Glyma.03G009900 Glycine max HOM05D000667 ORTHO05D009057 1.1e-17 93.2 62 67.7
BolC6t37909H Brassica oleracea HOM05D000667 ORTHO05D009057 4.3e-17 91.3 65 60.0
THA.LOC104802029 Tarenaya hassleriana HOM05D000667 ORTHO05D009057 5.6e-17 90.9 65 55.4
CARHR171680 Cardamine hirsuta HOM05D000667 ORTHO05D009057 2.1e-16 89.0 65 61.5
CAN.G78.56 Capsicum annuum HOM05D000667 ORTHO05D009057 3.6e-16 88.2 63 60.3
PGSC0003DMG400000165 Solanum tuberosum HOM05D000667 ORTHO05D009057 3.6e-16 88.2 66 57.6
Aa31LG10G15560 Aethionema arabicum HOM05D000667 ORTHO05D009057 8.1e-16 87.0 69 59.4
Hund27284 Selenicereus undatus HOM05D000667 ORTHO05D009057 3.1e-15 85.1 65 53.8
Nitab4.5_0008002g0010 Nicotiana tabacum HOM05D000667 ORTHO05D009057 5.2e-15 84.3 65 56.9
VMungo0331G1069 Vigna mungo HOM05D000667 ORTHO05D009057 8.9e-15 83.6 63 54.0
Nitab4.5_0005277g0020 Nicotiana tabacum HOM05D000667 ORTHO05D009057 1.2e-14 83.2 63 57.1
Sopen01g038330 Solanum pennellii HOM05D000667 ORTHO05D009057 2.0e-14 82.4 66 54.5
Pp3c7_3160 Physcomitrium patens HOM05D000667 ORTHO05D009057 3.4e-14 81.6 63 49.2
EL10Ac1g00425 Beta vulgaris HOM05D000667 ORTHO05D009057 5.8e-14 80.9 58 60.3
Pp3c11_18480 Physcomitrium patens HOM05D000667 ORTHO05D009057 2.9e-13 78.6 63 47.6
CDE02G4271 Ceratophyllum demersum HOM05D000667 ORTHO05D009057 8.4e-13 77.0 62 48.4
Os02g0114600 Oryza sativa ssp. japonica HOM05D000667 ORTHO05D009057 5.4e-12 74.3 60 50.0
SEGI_03445 Sequoiadendron giganteum HOM05D000667 ORTHO05D009057 9.3e-12 73.6 90 40.0
HPP92_008505 Vanilla planifolia HOM05D000667 ORTHO05D009057 6.0e-11 70.9 61 45.9
Mapoly0088s0080 Marchantia polymorpha HOM05D000667 ORTHO05D009057 5.1e-10 67.8 62 40.3
SMO116G0098 Selaginella moellendorffii HOM05D000667 ORTHO05D009057 3.3e-09 65.1 63 41.3
Lalb_Chr17g0339731 Lupinus albus HOM05D000667 ORTHO05D009057 7.3e-09 63.9 65 49.2
Eucgr.E00152 Eucalyptus grandis HOM05D000667 ORTHO05D009057 3.6e-08 61.6 65 44.6
QL08p049004 Quercus lobata HOM05D000667 ORTHO05D009057 1.8e-07 59.3 26 92.3
FvH4_7g14191 Fragaria vesca HOM05D000667 ORTHO05D009057 2.4e-07 58.9 27 92.6
FAN10G3555 Fragaria x ananassa HOM05D000667 ORTHO05D009057 2.4e-07 58.9 27 92.6
Zm00001eb229830 Zea mays HOM05D000667 ORTHO05D009057 5.3e-07 57.8 56 42.9
Cpa.g.sc18.248 Carica papaya HOM05D000667 ORTHO05D009057 6.9e-07 57.4 65 43.1
GSVIVG01026904001 Vitis vinifera HOM05D000667 ORTHO05D009057 6.9e-07 57.4 66 40.9
arahy.Tifrunner.gnm1.ann1.03D6J4 Arachis hypogaea HOM05D000667 ORTHO05D009057 1.2e-06 56.6 25 96.0
arahy.Tifrunner.gnm1.ann1.I7X4PC Arachis hypogaea HOM05D000667 ORTHO05D009057 1.2e-06 56.6 25 96.0
Cc02_g37910 Coffea canephora HOM05D000667 ORTHO05D009057 1.2e-06 56.6 66 36.4
Eucgr.E00142 Eucalyptus grandis HOM05D000667 ORTHO05D009057 1.5e-06 56.2 65 41.5
Eucgr.E00146 Eucalyptus grandis HOM05D000667 ORTHO05D009057 1.5e-06 56.2 65 41.5
Sc23g0002960 Simmondsia chinensis HOM05D000667 ORTHO05D009057 1.5e-06 56.2 65 43.1
COL.COLO4_12705 Corchorus olitorius HOM05D000667 ORTHO05D009057 2.6e-06 55.5 65 43.1
MD01G1058200 Malus domestica HOM05D000667 ORTHO05D009057 3.4e-06 55.1 66 43.9
DCAR_025187 Daucus carota HOM05D000667 ORTHO05D009057 4.4e-06 54.7 25 88.0
GSVIVG01026912001 Vitis vinifera HOM05D000667 ORTHO05D009057 5.8e-06 54.3 28 78.6
Atru.chr5.460 Acer truncatum HOM05D000667 ORTHO05D009057 9.9e-06 53.5 93 34.4
MSTRG.17261 Avicennia marina HOM05D000667 ORTHO05D009057 9.9e-06 53.5 25 76.0


User provided reference genes

Program Settings