Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G569400 Prunus persica HOM05D008483 ORTHO05D010726 1.5e-150 537.7 266 100.0
Prupe.1G555500 Prunus persica HOM05D008483 ORTHO05D010726 6.7e-122 442.6 258 87.6
MD12G1033400 Malus domestica HOM05D008483 ORTHO05D010726 4.7e-91 340.1 267 67.0
Cfa012968 Carpinus fangiana HOM05D008483 ORTHO05D010726 4.4e-57 227.3 264 46.6
Haze_21313 Corylus avellana HOM05D003774 ORTHO05D009174 1.2e-54 219.2 246 47.6
CSS0019242 Camellia sinensis var. sinensis HOM05D008483 ORTHO05D010726 1.2e-49 202.6 259 45.9
CSS0039397 Camellia sinensis var. sinensis HOM05D008483 ORTHO05D010726 1.2e-49 202.6 259 45.9
Cpa.g.sc137.16 Carica papaya HOM05D008483 ORTHO05D010726 2.4e-47 194.9 265 41.9
Hma1.2p1_1933F.1_g308065 Hydrangea macrophylla HOM05D008483 ORTHO05D010726 1.6e-46 192.2 242 44.6
GSVIVG01022790001 Vitis vinifera HOM05D008483 ORTHO05D010726 1.3e-45 189.1 247 43.3
Thecc.07G080600 Theobroma cacao HOM05D008483 ORTHO05D010726 1.8e-45 188.7 245 44.5
Sabra15G0030100 Salix brachista HOM05D008483 ORTHO05D010726 3.0e-45 188.0 238 44.1
Potri.015G036400 Populus trichocarpa HOM05D008483 ORTHO05D010726 3.9e-45 187.6 238 43.7
Sabra15G0031000 Salix brachista HOM05D008483 ORTHO05D010726 9.6e-44 183.0 238 43.3
Duzib213G0258 Durio zibethinus HOM05D008483 ORTHO05D010726 6.2e-43 180.3 244 42.2
DCAR_008181 Daucus carota HOM05D008483 ORTHO05D010726 1.1e-39 169.5 252 43.7
Oeu019187.1 Olea europaea HOM05D008483 ORTHO05D010726 7.1e-39 166.8 239 42.7
Cc08_g05050 Coffea canephora HOM05D008483 ORTHO05D010726 3.3e-36 157.9 234 39.3
Lsat_1_v5_gn_3_23061 Lactuca sativa HOM05D008483 ORTHO05D010726 4.3e-36 157.5 256 37.5
MBI16_g32672_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 4.3e-36 157.5 228 38.6
Nn8g41093 Nelumbo nucifera HOM05D008483 ORTHO05D010726 7.4e-36 156.8 233 41.2
Nitab4.5_0000030g0110 Nicotiana tabacum HOM05D008483 ORTHO05D010726 1.7e-32 145.6 189 42.3
Nitab4.5_0002941g0070 Nicotiana tabacum HOM05D008483 ORTHO05D010726 1.7e-32 145.6 183 42.6
Ciclev10013671m.g Citrus clementina HOM05D008483 ORTHO05D010726 6.5e-32 143.7 197 40.6
TWI60G0009 Tripterygium wilfordii HOM05D008483 ORTHO05D010726 6.5e-32 143.7 240 37.1
Ciclev10003653m.g Citrus clementina HOM05D008483 ORTHO05D010726 7.2e-31 140.2 210 38.6
Actinidia18161 Actinidia chinensis HOM05D008483 ORTHO05D010726 2.1e-30 138.7 218 38.5
HanXRQChr17g0536561 Helianthus annuus HOM05D008483 ORTHO05D010726 2.1e-30 138.7 278 35.3
AUR62027321 Chenopodium quinoa HOM05D008483 ORTHO05D010726 1.3e-29 136.0 221 36.7
Rhsim12G0158300 Rhododendron simsii HOM05D008483 ORTHO05D010726 3.9e-29 134.4 158 46.2
AUR62007411 Chenopodium quinoa HOM05D008483 ORTHO05D010726 1.9e-28 132.1 213 36.2
EL10Ac5g11926 Beta vulgaris HOM05D008483 ORTHO05D010726 2.5e-28 131.7 253 33.6
Hma1.2p1_0560F.1_g178890 Hydrangea macrophylla HOM05D008483 ORTHO05D010726 3.7e-27 127.9 156 43.6
THA.LOC104812723 Tarenaya hassleriana HOM05D008483 ORTHO05D010726 4.8e-27 127.5 236 34.3
TAR381G0371 Trochodendron aralioides HOM05D008483 ORTHO05D010726 1.5e-25 122.5 149 45.0
Gorai.002G071800 Gossypium raimondii HOM05D008483 ORTHO05D010726 5.9e-25 120.6 234 33.3
Gohir.D01G051900 Gossypium hirsutum HOM05D008483 ORTHO05D010726 1.0e-24 119.8 234 33.3
Thhalv10009444m.g Eutrema salsugineum HOM05D008483 ORTHO05D010726 1.3e-24 119.4 242 33.9
Gohir.A01G064800 Gossypium hirsutum HOM05D008483 ORTHO05D010726 1.7e-24 119.0 234 33.8
Eucgr.A00288 Eucalyptus grandis HOM05D008483 ORTHO05D010726 3.2e-23 114.8 181 38.1
Sp1g27550 Schrenkiella parvula HOM05D008483 ORTHO05D010726 4.2e-23 114.4 241 32.4
AT1G31840 Arabidopsis thaliana HOM05D008483 ORTHO05D010726 1.0e-21 109.8 243 32.9
MBI13_g10040_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 1.1e-20 106.3 151 37.7
RcHm_v2.0_Chr2g0139321 Rosa chinensis HOM05D008483 ORTHO05D010726 3.3e-20 104.8 145 42.1
Aa31LG2G14190 Aethionema arabicum HOM05D008483 ORTHO05D010726 9.7e-20 103.2 255 31.8
Carub.0001s3017 Capsella rubella HOM05D008483 ORTHO05D010726 2.4e-18 98.6 171 32.7
ECA246G3844 Erigeron canadensis HOM05D008483 ORTHO05D010726 2.2e-16 92.0 160 31.9
ATR1089G063 Amborella trichopoda HOM05D008483 ORTHO05D010726 2.7e-14 85.1 154 30.5
AL1G45930 Arabidopsis lyrata HOM05D008483 ORTHO05D010726 7.2e-07 60.5 81 40.7


User provided reference genes

Program Settings