Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G499600 Prunus persica HOM05D007246 ORTHO05D009066 1.7e-55 219.2 119 100.0
MD08G1164500 Malus domestica HOM05D007246 ORTHO05D009066 5.8e-43 177.6 119 80.7
Manes.18G076600 Manihot esculenta HOM05D007246 ORTHO05D009066 6.2e-37 157.5 119 72.3
RcHm_v2.0_Chr6g0295671 Rosa chinensis HOM05D007246 ORTHO05D009066 6.9e-36 154.1 119 74.8
Potri.002G084400 Populus trichocarpa HOM05D007246 ORTHO05D009066 9.0e-36 153.7 119 68.1
CiPaw.05G222500 Carya illinoinensis HOM05D007246 ORTHO05D009066 5.8e-35 151.0 120 70.8
QL09p034990 Quercus lobata HOM05D007246 ORTHO05D009066 8.4e-34 147.1 118 66.9
CANSAT25G3837 Cannabis sativa HOM05D007246 ORTHO05D009066 2.5e-33 145.6 120 66.7
Haze_00452 Corylus avellana HOM05D007246 ORTHO05D009066 2.5e-33 145.6 119 68.1
Cfa016011 Carpinus fangiana HOM05D007246 ORTHO05D009066 4.6e-32 141.4 119 66.4
Eucgr.F03786 Eucalyptus grandis HOM05D007246 ORTHO05D009066 3.0e-31 138.7 119 63.0
GSVIVG01008877001 Vitis vinifera HOM05D007246 ORTHO05D009066 3.9e-31 138.3 119 63.9
FvH4_2g26810 Fragaria vesca HOM05D007246 ORTHO05D009066 1.5e-30 136.3 118 67.8
Lj5g0017876 Lotus japonicus HOM05D007246 ORTHO05D009066 3.3e-30 135.2 117 62.4
Duzib093G0837 Durio zibethinus HOM05D007246 ORTHO05D009066 5.7e-30 134.4 122 62.3
FAN15G0425 Fragaria x ananassa HOM05D007246 ORTHO05D009066 1.3e-29 133.3 118 65.3
arahy.Tifrunner.gnm1.ann1.HQB0BQ Arachis hypogaea HOM05D007246 ORTHO05D009066 1.6e-29 132.9 120 62.5
Ciclev10002868m.g Citrus clementina HOM05D007246 ORTHO05D009066 2.8e-29 132.1 123 56.9
Atru.chr10.1388 Acer truncatum HOM05D007246 ORTHO05D009066 3.7e-29 131.7 119 59.7
arahy.Tifrunner.gnm1.ann1.B2XLC5 Arachis hypogaea HOM05D007246 ORTHO05D009066 3.7e-29 131.7 120 61.7
Actinidia02617 Actinidia chinensis HOM05D007246 ORTHO05D009066 4.8e-29 131.3 121 62.0
FAN27G1944 Fragaria x ananassa HOM05D007246 ORTHO05D009066 1.4e-28 129.8 114 65.8
Gorai.010G050000 Gossypium raimondii HOM05D007246 ORTHO05D009066 1.8e-28 129.4 119 63.9
PGR142G2996 Punica granatum HOM05D007246 ORTHO05D009066 1.8e-28 129.4 120 60.8
TWI36G0927 Tripterygium wilfordii HOM05D007246 ORTHO05D009066 1.8e-28 129.4 119 61.3
Thecc.08G124300 Theobroma cacao HOM05D007246 ORTHO05D009066 2.4e-28 129.0 119 62.2
ClCG11G015710 Citrullus lanatus HOM05D007246 ORTHO05D009066 6.9e-28 127.5 121 57.0
Rhsim03G0059000 Rhododendron simsii HOM05D007246 ORTHO05D009066 6.9e-28 127.5 121 58.7
Gohir.A06G044000 Gossypium hirsutum HOM05D007246 ORTHO05D009066 9.0e-28 127.1 119 62.2
Sed0023701 Sechium edule HOM05D007246 ORTHO05D009066 2.0e-27 125.9 121 58.7
COL.COLO4_35932 Corchorus olitorius HOM05D007246 ORTHO05D009066 3.4e-27 125.2 118 57.6
Gohir.D06G044900 Gossypium hirsutum HOM05D007246 ORTHO05D009066 4.5e-27 124.8 120 63.3
Hma1.2p1_0186F.1_g081760 Hydrangea macrophylla HOM05D007246 ORTHO05D009066 1.0e-26 123.6 121 58.7
CSS0048322 Camellia sinensis var. sinensis HOM05D007246 ORTHO05D009066 1.3e-26 123.2 122 57.4
Nn5g28257 Nelumbo nucifera HOM05D007246 ORTHO05D009066 2.2e-26 122.5 121 58.7
Glyma.20G199500 Glycine max HOM05D007246 ORTHO05D009066 5.0e-26 121.3 123 56.1
CsaV3_4G028300 Cucumis sativus L. HOM05D007246 ORTHO05D009066 8.4e-26 120.6 121 55.4
TAR381G0547 Trochodendron aralioides HOM05D007246 ORTHO05D009066 1.1e-25 120.2 104 61.5
MELO3C010475.2 Cucumis melo HOM05D007246 ORTHO05D009066 2.5e-25 119.0 121 55.4
Lalb_Chr06g0169561 Lupinus albus HOM05D007246 ORTHO05D009066 2.5e-25 119.0 121 53.7
Phvul.L001676 Phaseolus vulgaris HOM05D007246 ORTHO05D009066 2.5e-25 119.0 119 54.6
Cpa.g.sc36.60 Carica papaya HOM05D007246 ORTHO05D009066 1.2e-24 116.7 102 60.8
Aqoxy6G00205 Aquilegia oxysepala HOM05D007246 ORTHO05D009066 2.1e-24 115.9 122 54.1
TPR.G18552 Trifolium pratense HOM05D007246 ORTHO05D009066 3.5e-24 115.2 114 57.0
Nitab4.5_0001803g0080 Nicotiana tabacum HOM05D007246 ORTHO05D009066 4.6e-24 114.8 119 53.8
VMungo0720G2760 Vigna mungo HOM05D003112 ORTHO05D003660 4.6e-24 114.8 97 62.9
EL10Ac1g01002 Beta vulgaris HOM05D007246 ORTHO05D009066 7.9e-24 114.0 119 52.9
Psat6g131200 Pisum sativum HOM05D007246 ORTHO05D009066 3.0e-23 112.1 123 55.3
AL1G54790 Arabidopsis lyrata HOM05D007246 ORTHO05D009066 6.7e-23 110.9 109 55.0
AT1G48200 Arabidopsis thaliana HOM05D007246 ORTHO05D009066 1.1e-22 110.2 117 51.3
Ca_09797_v3 Cicer arietinum L. HOM05D007246 ORTHO05D009066 1.9e-22 109.4 115 53.0
Sp1g35150 Schrenkiella parvula HOM05D007246 ORTHO05D009066 1.9e-22 109.4 116 50.9
BolC7t43138H Brassica oleracea HOM05D007246 ORTHO05D009066 3.3e-22 108.6 115 53.0
Carub.0001s3729 Capsella rubella HOM05D007246 ORTHO05D009066 3.3e-22 108.6 117 50.4
HanXRQChr13g0407621 Helianthus annuus HOM05D007246 ORTHO05D009066 5.7e-22 107.8 119 50.4
Peaxi162Scf00537g00034 Petunia axillaris HOM05D007246 ORTHO05D009066 5.7e-22 107.8 121 53.7
BcaC06g31695 Brassica carinata HOM05D007246 ORTHO05D009066 7.4e-22 107.5 116 50.9
A06p47840 Brassica napus HOM05D007246 ORTHO05D009066 1.3e-21 106.7 116 51.7
BraA06t27654Z Brassica rapa HOM05D007246 ORTHO05D009066 1.3e-21 106.7 116 51.7
Sc25g0000500 Simmondsia chinensis HOM05D007246 ORTHO05D009066 1.3e-21 106.7 99 59.6
Aa31LG10G5550 Aethionema arabicum HOM05D007246 ORTHO05D009066 2.2e-21 105.9 116 50.9
Lsat_1_v5_gn_5_179321 Lactuca sativa HOM05D007246 ORTHO05D009066 3.7e-21 105.1 107 51.4
BcaC06g34651 Brassica carinata HOM05D007246 ORTHO05D009066 6.3e-21 104.4 115 51.3
C07p26120 Brassica napus HOM05D007246 ORTHO05D009066 6.3e-21 104.4 115 51.3
A06p04630 Brassica napus HOM05D007246 ORTHO05D009066 8.2e-21 104.0 118 51.7
Oeu040422.1 Olea europaea HOM05D007246 ORTHO05D009066 8.2e-21 104.0 110 53.6
Sp1g35170 Schrenkiella parvula HOM05D007246 ORTHO05D009066 1.4e-20 103.2 115 49.6
Migut.C01135 Erythranthe guttata HOM05D007246 ORTHO05D009066 1.8e-20 102.8 121 47.9
Medtr1g073190 Medicago truncatula HOM05D007246 ORTHO05D009066 2.4e-20 102.4 115 53.9
PGSC0003DMG400000898 Solanum tuberosum HOM05D007246 ORTHO05D009066 3.1e-20 102.1 122 49.2
DCAR_003548 Daucus carota HOM05D007246 ORTHO05D009066 6.9e-20 100.9 97 53.6
Thhalv10011824m.g Eutrema salsugineum HOM05D007246 ORTHO05D009066 6.9e-20 100.9 116 46.6
PSO528G0221 Papaver somniferum HOM05D007246 ORTHO05D009066 6.9e-20 100.9 117 50.4
PSO170G1503 Papaver somniferum HOM05D007246 ORTHO05D009066 1.2e-19 100.1 117 49.6
Sopen11g007630 Solanum pennellii HOM05D007246 ORTHO05D009066 1.2e-19 100.1 122 48.4
BraA06t23667Z Brassica rapa HOM05D007246 ORTHO05D009066 1.5e-19 99.8 117 51.3
ECA248G1302 Erigeron canadensis HOM05D007246 ORTHO05D009066 1.5e-19 99.8 119 47.1
Solyc11g012890.2 Solanum lycopersicum HOM05D007246 ORTHO05D009066 1.5e-19 99.8 122 48.4
Ah.05g171160 Amaranthus hybridus HOM05D007246 ORTHO05D009066 2.6e-19 99.0 79 65.8
Hund17288 Selenicereus undatus HOM05D007246 ORTHO05D009066 4.5e-19 98.2 95 54.7
C06p02690 Brassica napus HOM05D007246 ORTHO05D009066 7.7e-19 97.4 117 51.3
BolC6t35395H Brassica oleracea HOM05D007246 ORTHO05D009066 7.7e-19 97.4 117 51.3
SGA_v2.0_scaffold24G10465 Striga asiatica HOM05D007246 ORTHO05D009066 1.3e-18 96.7 93 52.7
Nitab4.5_0001273g0060 Nicotiana tabacum HOM05D007246 ORTHO05D009066 5.0e-18 94.7 99 52.5
BcaC08g43014 Brassica carinata HOM05D007246 ORTHO05D009066 8.5e-18 94.0 117 49.6
MSTRG.1448 Avicennia marina HOM05D007246 ORTHO05D009066 1.9e-17 92.8 127 42.5
MBI01_g01254_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 9.4e-17 90.5 82 54.9
MBI01_g01252_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 1.2e-16 90.1 82 54.9
MBI01_g01253_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 2.7e-16 89.0 82 53.7
MBI01_g01255_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 3.6e-16 88.6 82 53.7
CDE06G1719 Ceratophyllum demersum HOM05D007246 ORTHO05D009066 6.1e-16 87.8 107 48.6
CARHR037830 Cardamine hirsuta HOM05D007246 ORTHO05D009066 5.1e-15 84.7 78 56.4
THA.LOC104821809 Tarenaya hassleriana HOM05D007246 ORTHO05D009066 6.7e-15 84.3 111 42.3
FAN20G0163 Fragaria x ananassa HOM05D007246 ORTHO05D009066 1.1e-14 83.6 63 68.3
unitig_37.g12972 Utricularia gibba HOM05D007246 ORTHO05D009066 2.0e-14 82.8 106 48.1
BcaB07g33783 Brassica carinata HOM05D007246 ORTHO05D009066 4.3e-14 81.6 104 51.0
Carub.0007s3396 Capsella rubella HOM05D007246 ORTHO05D009066 1.7e-13 79.7 116 44.0
BcaB07g33731 Brassica carinata HOM05D007246 ORTHO05D009066 9.1e-12 73.9 88 52.3
BcaB07g33733 Brassica carinata HOM05D007246 ORTHO05D009066 9.1e-12 73.9 88 52.3
SGA_v2.0_scaffold52G18970 Striga asiatica HOM05D007246 ORTHO05D009066 9.1e-12 73.9 117 38.5
SalBow7G0738 Salvia bowleyana HOM05D007246 ORTHO05D009066 1.5e-11 73.2 102 39.2
ATR0716G022 Amborella trichopoda HOM05D007246 ORTHO05D009066 3.4e-11 72.0 80 48.8
HPP92_002815 Vanilla planifolia HOM05D007246 ORTHO05D009066 4.7e-08 61.6 74 44.6
Os06g0149500 Oryza sativa ssp. japonica HOM05D007246 ORTHO05D009066 1.4e-07 60.1 90 36.7
SEGI_11751 Sequoiadendron giganteum HOM05D007246 ORTHO05D009066 3.0e-07 58.9 104 38.5
Peaxi162Scf17552g00001 Petunia axillaris HOM05D007246 ORTHO05D009066 3.9e-07 58.5 63 54.0
arahy.Tifrunner.gnm1.ann1.65RZ9M Arachis hypogaea HOM05D007246 ORTHO05D009066 8.8e-07 57.4 69 47.8
SGA_v2.0_scaffold52G18969 Striga asiatica HOM05D007246 ORTHO05D009066 5.7e-06 54.7 85 40.0


User provided reference genes

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