Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 2.2e-157 558.9 279 100.0
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 4.7e-136 488.0 280 85.4
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 3.5e-123 445.3 279 78.9
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 3.6e-120 435.3 280 80.0
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 4.7e-120 434.9 279 77.8
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 1.1e-119 433.7 279 78.1
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.1e-119 433.7 279 78.1
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 1.2e-118 430.3 272 76.5
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 9.9e-118 427.2 277 75.1
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 9.9e-118 427.2 277 75.1
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 9.9e-118 427.2 275 77.8
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 4.2e-116 421.8 277 75.5
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 5.4e-116 421.4 281 76.9
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 1.2e-115 420.2 280 74.3
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 3.5e-115 418.7 278 74.1
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 1.7e-114 416.4 280 75.0
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 2.3e-114 416.0 280 75.7
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 3.9e-114 415.2 275 75.3
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 5.1e-114 414.8 277 73.6
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 1.5e-113 413.3 278 74.5
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 7.3e-113 411.0 277 73.3
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 2.8e-112 409.1 283 75.3
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 3.6e-112 408.7 281 74.0
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 8.1e-112 407.5 265 76.2
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 2.4e-111 406.0 282 73.0
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 4.5e-110 401.7 271 73.4
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 9.9e-110 400.6 275 72.4
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 2.9e-109 399.1 272 73.9
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 3.8e-109 398.7 349 62.5
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 5.4e-108 394.8 264 72.7
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 7.1e-108 394.4 280 70.7
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 2.1e-107 392.9 281 69.8
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 1.0e-106 390.6 257 75.5
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 2.3e-106 389.4 267 73.0
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 5.1e-106 388.3 255 74.9
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 1.1e-105 387.1 299 68.2
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 1.3e-104 383.6 280 69.6
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 1.8e-103 379.8 280 69.3
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 3.1e-103 379.0 276 70.7
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 4.0e-103 378.6 274 70.8
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 9.0e-103 377.5 274 68.2
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 9.0e-103 377.5 274 68.6
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 1.2e-102 377.1 271 70.8
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 2.6e-102 375.9 273 68.9
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 3.4e-102 375.6 272 69.1
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 3.4e-102 375.6 269 69.1
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 4.5e-102 375.2 267 70.4
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 5.8e-102 374.8 278 69.4
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 9.9e-102 374.0 272 69.9
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 6.4e-101 371.3 264 72.0
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 8.4e-101 370.9 270 69.6
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 1.1e-100 370.5 291 69.4
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.9e-100 369.8 267 68.5
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 3.2e-100 369.0 291 68.4
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 4.2e-100 368.6 270 69.3
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 9.3e-100 367.5 272 70.2
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 1.2e-99 367.1 268 69.0
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.6e-99 366.7 270 68.9
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 3.5e-99 365.5 282 66.0
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 4.6e-99 365.2 282 66.0
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 4.6e-99 365.2 269 67.7
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 1.8e-98 363.2 273 67.4
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 3.0e-98 362.5 273 68.9
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 3.9e-98 362.1 282 66.3
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 3.9e-98 362.1 282 66.3
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 3.9e-98 362.1 273 68.9
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 3.9e-98 362.1 271 69.4
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 5.1e-98 361.7 274 65.3
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 1.5e-97 360.1 283 65.4
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 2.5e-97 359.4 272 68.0
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 3.3e-97 359.0 272 66.9
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 9.6e-97 357.5 277 66.1
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 9.6e-97 357.5 265 70.2
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 9.6e-97 357.5 264 70.8
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 1.3e-96 357.1 258 70.9
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 1.8e-95 353.2 276 67.8
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 3.1e-95 352.4 276 67.4
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 2.0e-94 349.7 271 66.4
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 2.6e-94 349.4 255 71.0
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 2.6e-94 349.4 258 70.9
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 3.8e-93 345.5 276 65.2
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 3.8e-93 345.5 276 65.2
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 3.8e-93 345.5 258 69.8
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 5.5e-92 341.7 276 64.5
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 4.6e-91 338.6 257 65.8
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 6.0e-91 338.2 257 69.3
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 7.9e-91 337.8 276 64.1
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 6.3e-88 328.2 265 63.4
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 2.2e-80 303.1 179 81.0
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 9.1e-79 297.7 269 59.1
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 2.2e-77 293.1 181 80.7
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 1.5e-73 280.4 194 71.1
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 1.3e-72 277.3 171 78.9
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 6.3e-72 275.0 176 76.1
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 3.2e-68 262.7 174 74.1
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 1.2e-67 260.8 181 70.2
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 3.8e-61 239.2 275 50.2
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 1.9e-60 236.9 175 68.6
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 2.1e-59 233.4 159 71.7
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 4.7e-59 232.3 261 48.7
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 4.4e-57 225.7 273 45.8
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 6.3e-56 221.9 277 46.2
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 2.9e-53 213.0 135 74.8
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 2.2e-48 196.8 278 42.4
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.7e-45 187.2 227 45.8
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 8.6e-45 184.9 268 42.2
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 7.2e-44 181.8 277 43.0
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 4.3e-36 156.0 79 96.2
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 3.0e-34 149.8 129 58.1
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 2.5e-28 130.2 78 78.2
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 1.2e-27 127.9 278 32.7
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 3.1e-26 123.2 92 65.2
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 5.0e-21 105.9 80 65.0
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 4.7e-19 99.4 150 41.3
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 3.7e-16 89.7 183 38.8
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 2.7e-14 83.6 173 37.0
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 3.9e-13 79.7 64 62.5
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 3.6e-11 73.2 66 57.6
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 1.5e-09 67.8 82 42.7


User provided reference genes

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