Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 2.7e-135 485.3 250 100.0
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 1.1e-128 463.4 250 94.4
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 3.5e-122 441.8 248 87.1
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 4.5e-122 441.4 248 88.7
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 1.2e-119 433.3 245 88.6
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 1.6e-119 433.0 248 86.3
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 2.1e-119 432.6 248 84.3
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 2.1e-119 432.6 248 85.1
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 2.1e-119 432.6 248 86.7
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 2.8e-119 432.2 248 85.1
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 3.0e-118 428.7 248 85.5
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 8.9e-118 427.2 243 86.4
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 3.4e-117 425.2 247 84.6
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 3.4e-117 425.2 248 84.7
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 5.7e-117 424.5 245 83.7
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 2.2e-116 422.5 248 82.7
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 1.1e-115 420.2 240 86.2
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 2.4e-115 419.1 247 84.2
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 2.4e-115 419.1 242 83.9
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 2.4e-115 419.1 243 83.1
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 2.4e-115 419.1 245 85.3
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 7.0e-115 417.5 246 83.3
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 7.0e-115 417.5 242 83.9
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 2.7e-114 415.6 243 82.3
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 1.0e-113 413.7 245 86.5
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 2.3e-113 412.5 247 83.4
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 1.1e-112 410.2 244 82.8
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 1.1e-112 410.2 244 82.8
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 1.1e-112 410.2 248 80.2
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 1.1e-112 410.2 248 80.6
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 1.5e-112 409.8 242 82.2
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 1.9e-112 409.5 248 78.6
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 1.9e-112 409.5 248 78.2
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 2.5e-112 409.1 246 80.9
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 2.5e-112 409.1 242 84.3
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 5.6e-112 407.9 242 82.6
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 7.3e-112 407.5 242 82.6
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 9.5e-112 407.1 248 78.2
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 9.5e-112 407.1 248 78.2
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 1.2e-111 406.8 257 78.6
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 2.8e-111 405.6 248 77.8
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 2.8e-111 405.6 248 77.8
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 2.8e-111 405.6 248 77.8
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 2.8e-111 405.6 248 77.4
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 2.8e-111 405.6 248 77.8
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 4.7e-111 404.8 247 81.8
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 8.0e-111 404.1 247 78.1
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 8.0e-111 404.1 247 78.1
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 8.0e-111 404.1 242 83.1
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 2.3e-110 402.5 245 78.8
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 3.1e-110 402.1 242 81.8
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 4.0e-110 401.7 246 78.5
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 4.0e-110 401.7 247 76.5
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 6.8e-110 401.0 248 76.6
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 8.9e-110 400.6 247 78.1
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 8.9e-110 400.6 249 79.5
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 8.9e-110 400.6 245 80.0
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 1.5e-109 399.8 243 80.2
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 2.0e-109 399.4 245 78.8
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 4.4e-109 398.3 245 79.2
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 9.8e-109 397.1 246 78.9
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 2.2e-108 396.0 248 78.2
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 4.9e-108 394.8 247 77.3
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 4.9e-108 394.8 252 79.4
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 1.1e-107 393.7 247 76.1
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 1.2e-106 390.2 245 79.6
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 1.3e-105 386.7 264 72.0
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 1.3e-105 386.7 250 74.0
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 5.0e-105 384.8 245 75.9
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 1.1e-104 383.6 242 78.9
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 1.9e-104 382.9 246 76.0
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 1.6e-103 379.8 245 75.5
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 6.2e-103 377.9 249 73.5
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 7.5e-101 370.9 246 74.0
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 6.4e-100 367.9 240 72.5
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 2.4e-99 365.9 234 76.1
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 3.2e-99 365.5 245 72.7
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 8.6e-97 357.5 203 87.7
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 1.1e-96 357.1 249 69.5
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 1.5e-96 356.7 203 87.7
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 3.3e-96 355.5 245 71.0
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 4.3e-96 355.1 245 71.0
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 1.4e-94 350.1 242 70.7
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 8.9e-94 347.4 203 83.3
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 8.9e-94 347.4 246 69.5
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 4.4e-93 345.1 213 82.2
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 2.9e-92 342.4 228 74.1
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 7.1e-91 337.8 245 69.4
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 1.2e-90 337.0 245 66.5
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 2.3e-89 332.8 248 64.1
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 3.9e-89 332.0 248 69.8
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 1.9e-88 329.7 198 76.8
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 4.3e-88 328.6 184 88.0
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 2.2e-84 316.2 196 73.5
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 2.9e-84 315.8 202 79.7
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 1.5e-80 303.5 245 65.3
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 1.9e-80 303.1 258 65.9
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 1.1e-75 287.3 246 61.0
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 4.0e-70 268.9 249 53.8
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 9.3e-67 257.7 242 50.8
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 1.0e-65 254.2 238 53.4
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 3.3e-64 249.2 158 74.7
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 4.3e-64 248.8 202 68.3
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 9.0e-62 241.1 239 49.8
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 7.1e-59 231.5 242 45.0
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 7.2e-51 204.9 153 66.0
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 2.1e-50 203.4 161 64.6
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 2.1e-50 203.4 157 62.4
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 2.7e-50 203.0 153 66.0
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 9.7e-48 194.5 132 70.5
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 2.8e-47 193.0 120 79.2
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 3.1e-46 189.5 117 80.3
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 2.2e-36 156.8 119 66.4
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 1.4e-35 154.1 231 39.8
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 2.1e-34 150.2 95 74.7
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 1.0e-33 147.9 91 75.8
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 2.3e-33 146.7 92 77.2
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 1.6e-18 97.4 166 44.6
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 5.2e-17 92.4 71 60.6
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 5.2e-09 65.9 39 71.8
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 9.8e-08 61.6 38 81.6


User provided reference genes

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