Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G112300 Prunus persica HOM05D005592 ORTHO05D006067 1.8e-50 202.2 98 100.0
Prupe.1G112400 Prunus persica HOM05D005592 ORTHO05D006067 1.2e-22 109.8 54 96.3
Prupe.2G267900 Prunus persica HOM05D005592 ORTHO05D006067 6.3e-19 97.4 50 94.0
MD07G1239100 Malus domestica HOM05D005592 ORTHO05D006067 7.2e-15 84.0 50 84.0
RcHm_v2.0_Chr1g0372931 Rosa chinensis HOM05D005592 ORTHO05D006067 1.0e-13 80.1 50 82.0
FvH4_7g26380 Fragaria vesca HOM05D005592 ORTHO05D006067 1.4e-13 79.7 50 80.0
FAN01G0671 Fragaria x ananassa HOM05D005592 ORTHO05D006067 1.4e-13 79.7 50 80.0
FAN03G0809 Fragaria x ananassa HOM05D005592 ORTHO05D006067 8.8e-13 77.0 50 76.0
Cfa001174 Carpinus fangiana HOM05D005592 ORTHO05D006067 2.0e-12 75.9 63 57.1
Thecc.10G188900 Theobroma cacao HOM05D005592 ORTHO05D006067 2.0e-12 75.9 48 83.3
COL.COLO4_19504 Corchorus olitorius HOM05D005592 ORTHO05D006067 1.3e-11 73.2 50 78.0
arahy.Tifrunner.gnm1.ann1.IE8JUR Arachis hypogaea HOM05D005592 ORTHO05D006067 2.8e-11 72.0 66 56.1
Ciclev10030128m.g Citrus clementina HOM05D005592 ORTHO05D006067 2.8e-11 72.0 52 71.2
Duzib066G0005 Durio zibethinus HOM05D005592 ORTHO05D006067 3.7e-11 71.6 50 72.0
Nn5g26734 Nelumbo nucifera HOM05D005592 ORTHO05D006067 4.8e-11 71.2 50 72.0
arahy.Tifrunner.gnm1.ann1.8FW391 Arachis hypogaea HOM05D005592 ORTHO05D006067 6.3e-11 70.9 48 75.0
Glyma.04G225100 Glycine max HOM05D005592 ORTHO05D006067 6.3e-11 70.9 62 59.7
Gorai.013G010300 Gossypium raimondii HOM05D005592 ORTHO05D006067 6.3e-11 70.9 50 70.0
Gohir.D13G009600 Gossypium hirsutum HOM05D005592 ORTHO05D006067 8.3e-11 70.5 50 70.0
CANSAT56G3301 Cannabis sativa HOM05D005592 ORTHO05D006067 1.1e-10 70.1 50 68.0
Gohir.A13G008900 Gossypium hirsutum HOM05D005592 ORTHO05D006067 1.8e-10 69.3 48 70.8
Lj1g0017160 Lotus japonicus HOM05D005592 ORTHO05D006067 3.1e-10 68.6 62 58.1
Peaxi162Scf00073g02027 Petunia axillaris HOM05D005592 ORTHO05D006067 3.1e-10 68.6 67 50.7
Sed0013074 Sechium edule HOM05D005592 ORTHO05D006067 3.1e-10 68.6 74 50.0
TPR.G13972 Trifolium pratense HOM05D005592 ORTHO05D006067 3.1e-10 68.6 62 58.1
TAR369G0313 Trochodendron aralioides HOM05D005592 ORTHO05D006067 3.1e-10 68.6 51 74.5
VMungo1309G2865 Vigna mungo HOM05D005592 ORTHO05D006067 3.1e-10 68.6 64 56.2
Cpa.g.sc41.42 Carica papaya HOM05D005592 ORTHO05D006067 5.4e-10 67.8 55 63.6
CSS0024281 Camellia sinensis var. sinensis HOM05D005592 ORTHO05D006067 7.0e-10 67.4 50 70.0
ClCG03G006970 Citrullus lanatus HOM05D005592 ORTHO05D006067 9.1e-10 67.0 51 64.7
Lalb_Chr23g0272061 Lupinus albus HOM05D005592 ORTHO05D006067 9.1e-10 67.0 66 53.0
Psat5g070400 Pisum sativum HOM05D005592 ORTHO05D006067 9.1e-10 67.0 62 56.5
Glyma.06G139600 Glycine max HOM05D005592 ORTHO05D006067 1.6e-09 66.2 62 56.5
PSO339G4695 Papaver somniferum HOM05D005592 ORTHO05D006067 1.6e-09 66.2 61 60.7
Ca_16843_v3 Cicer arietinum L. HOM05D005592 ORTHO05D006067 2.0e-09 65.9 62 56.5
DCAR_018065 Daucus carota HOM05D005592 ORTHO05D006067 2.0e-09 65.9 58 58.6
Phvul.009G040900 Phaseolus vulgaris HOM05D005592 ORTHO05D006067 2.0e-09 65.9 62 56.5
Actinidia13627 Actinidia chinensis HOM05D005592 ORTHO05D006067 2.7e-09 65.5 60 58.3
Aqoxy2G00637 Aquilegia oxysepala HOM05D005592 ORTHO05D006067 2.7e-09 65.5 51 66.7
Hma1.2p1_0264F.1_g105700 Hydrangea macrophylla HOM05D005592 ORTHO05D006067 2.7e-09 65.5 50 68.0
Hma1.2p1_0264F.1_g105710 Hydrangea macrophylla HOM05D005592 ORTHO05D006067 2.7e-09 65.5 50 68.0
Nitab4.5_0001130g0030 Nicotiana tabacum HOM05D005592 ORTHO05D006067 2.7e-09 65.5 67 46.3
ECA232G3941 Erigeron canadensis HOM05D005592 ORTHO05D006067 4.5e-09 64.7 83 49.4
CAN.G1151.3 Capsicum annuum HOM05D005592 ORTHO05D006067 5.9e-09 64.3 67 46.3
Nitab4.5_0000103g0070 Nicotiana tabacum HOM05D005592 ORTHO05D006067 5.9e-09 64.3 67 46.3
CsaV3_1G032540 Cucumis sativus L. HOM05D005592 ORTHO05D006067 7.7e-09 63.9 51 64.7
Eucgr.H00237 Eucalyptus grandis HOM05D005592 ORTHO05D006067 7.7e-09 63.9 64 51.6
Medtr3g093440 Medicago truncatula HOM05D005592 ORTHO05D006067 7.7e-09 63.9 62 53.2
Sabra04G0160100 Salix brachista HOM05D005592 ORTHO05D006067 1.0e-08 63.5 56 60.7
MELO3C002725.2 Cucumis melo HOM05D005592 ORTHO05D006067 1.3e-08 63.2 49 65.3
Lj1C971G13 Lonicera japonica HOM05D005592 ORTHO05D006067 1.3e-08 63.2 52 65.4
CiPaw.01G308100 Carya illinoinensis HOM05D005592 ORTHO05D006067 1.7e-08 62.8 52 61.5
Oeu008098.1 Olea europaea HOM05D005592 ORTHO05D006067 1.7e-08 62.8 52 59.6
Potri.016G144200 Populus trichocarpa HOM05D005592 ORTHO05D006067 1.7e-08 62.8 56 62.5
TWI75G0267 Tripterygium wilfordii HOM05D005592 ORTHO05D006067 1.7e-08 62.8 48 68.8
Cc02_g04980 Coffea canephora HOM05D005592 ORTHO05D006067 2.9e-08 62.0 74 48.6
Manes.18G121600 Manihot esculenta HOM05D005592 ORTHO05D006067 2.9e-08 62.0 50 62.0
EL10Ac2g02700 Beta vulgaris HOM05D005592 ORTHO05D006067 3.8e-08 61.6 83 41.0
Sc10g0003140 Simmondsia chinensis HOM05D005592 ORTHO05D006067 3.8e-08 61.6 50 62.0
Sopen03g025240 Solanum pennellii HOM05D005592 ORTHO05D006067 6.5e-08 60.8 67 44.8
Rhsim03G0155100 Rhododendron simsii HOM05D005592 ORTHO05D006067 1.1e-07 60.1 50 58.0
AUR62031675 Chenopodium quinoa HOM05D005592 ORTHO05D006067 1.5e-07 59.7 84 42.9
AL1G47780 Arabidopsis lyrata HOM05D005592 ORTHO05D006067 1.2e-06 56.6 53 56.6
CDE04G0667 Ceratophyllum demersum HOM05D005592 ORTHO05D006067 1.2e-06 56.6 53 58.5
Migut.F00557 Erythranthe guttata HOM05D005592 ORTHO05D006067 1.2e-06 56.6 50 60.0
SalBow3G4308 Salvia bowleyana HOM05D005592 ORTHO05D006067 1.6e-06 56.2 52 53.8
Hund15772 Selenicereus undatus HOM05D005592 ORTHO05D006067 1.6e-06 56.2 66 45.5
Ah.10g029720 Amaranthus hybridus HOM05D005592 ORTHO05D006067 2.1e-06 55.8 67 41.8
Dinv21875 Davidia involucrata HOM05D005592 ORTHO05D006067 2.1e-06 55.8 44 65.9
Lsat_1_v5_gn_9_60521 Lactuca sativa HOM05D005592 ORTHO05D006067 2.7e-06 55.5 52 57.7
THA.LOC104813079 Tarenaya hassleriana HOM05D005592 ORTHO05D006067 3.6e-06 55.1 52 61.5
vmacro06869 Vaccinium macrocarpon HOM05D005592 ORTHO05D006067 4.7e-06 54.7 64 46.9
AT1G33400 Arabidopsis thaliana HOM05D005592 ORTHO05D006067 6.1e-06 54.3 53 52.8
HanXRQChr09g0252351 Helianthus annuus HOM05D005592 ORTHO05D006067 8.0e-06 53.9 51 54.9
SHI08066 Sapria himalayana HOM05D005592 ORTHO05D006067 8.0e-06 53.9 51 51.0


User provided reference genes

Program Settings