Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c8_5390 Physcomitrium patens HOM05D000384 ORTHO05D311806 2.9e-11 70.5 35 100.0
Pp3c18_4760 Physcomitrium patens HOM05D000384 ORTHO05D000468 5.8e-07 56.2 34 76.5
Mapoly0008s0245 Marchantia polymorpha HOM05D000384 ORTHO05D000468 7.5e-07 55.8 34 73.5
Pp3c22_15210 Physcomitrium patens HOM05D000384 ORTHO05D000468 7.5e-07 55.8 34 73.5
HPP92_011452 Vanilla planifolia HOM05D000384 ORTHO05D000468 7.5e-07 55.8 34 73.5
Gohir.A09G213610 Gossypium hirsutum HOM05D000384 ORTHO05D000468 1.3e-06 55.1 34 73.5
Gorai.006G232200 Gossypium raimondii HOM05D000384 ORTHO05D000468 1.3e-06 55.1 34 73.5
Sed0010881 Sechium edule HOM05D000384 ORTHO05D000468 1.3e-06 55.1 34 73.5
SMO143G0251 Selaginella moellendorffii HOM05D000384 ORTHO05D000468 1.3e-06 55.1 34 73.5
AagrBONN_evm.TU.Sc2ySwM_228.1927 Anthoceros agrestis HOM05D000384 ORTHO05D000468 1.7e-06 54.7 34 70.6
Potri.013G127800 Populus trichocarpa HOM05D000384 ORTHO05D000468 1.7e-06 54.7 34 70.6
unitig_8.g3636 Utricularia gibba HOM05D000384 ORTHO05D000468 1.7e-06 54.7 34 73.5
Cfa015675 Carpinus fangiana HOM05D000384 ORTHO05D000468 2.2e-06 54.3 34 70.6
CiPaw.02G099400 Carya illinoinensis HOM05D000384 ORTHO05D000468 2.9e-06 53.9 34 70.6
Haze_00853 Corylus avellana HOM05D000384 ORTHO05D000468 2.9e-06 53.9 34 70.6
Duzib151G0811 Durio zibethinus HOM05D000384 ORTHO05D000468 2.9e-06 53.9 34 70.6
Duzib268G0499 Durio zibethinus HOM05D000384 ORTHO05D000468 2.9e-06 53.9 34 70.6
FAN07G1658 Fragaria x ananassa HOM05D000384 ORTHO05D000468 2.9e-06 53.9 34 70.6
FAN17G1893 Fragaria x ananassa HOM05D000384 ORTHO05D000468 2.9e-06 53.9 34 70.6
FAN22G1418 Fragaria x ananassa HOM05D000384 ORTHO05D000468 2.9e-06 53.9 34 70.6
LjContig00408g0002428 Lotus japonicus HOM05D000384 ORTHO05D000468 2.9e-06 53.9 34 73.5
Lalb_Chr05g0218821 Lupinus albus HOM05D000384 ORTHO05D000468 2.9e-06 53.9 34 73.5
QL10p056575 Quercus lobata HOM05D000384 ORTHO05D000468 2.9e-06 53.9 34 70.6
RcHm_v2.0_Chr4g0405711 Rosa chinensis HOM05D000384 ORTHO05D000468 2.9e-06 53.9 34 70.6
Thecc.04G164100 Theobroma cacao HOM05D000384 ORTHO05D000468 2.9e-06 53.9 34 70.6
arahy.Tifrunner.gnm1.ann1.9U2SR4 Arachis hypogaea HOM05D000384 ORTHO05D000468 3.7e-06 53.5 34 73.5
arahy.Tifrunner.gnm1.ann1.B36403 Arachis hypogaea HOM05D000384 ORTHO05D000468 3.7e-06 53.5 34 73.5
Lsat_1_v5_gn_6_65880 Lactuca sativa HOM05D000384 ORTHO05D000468 3.7e-06 53.5 34 70.6
arahy.Tifrunner.gnm1.ann1.MX3U8L Arachis hypogaea HOM05D000384 ORTHO05D000468 4.9e-06 53.1 33 72.7
FAN09G0493 Fragaria x ananassa HOM05D000384 ORTHO05D000468 4.9e-06 53.1 34 70.6
Manes.01G016600 Manihot esculenta HOM05D000384 ORTHO05D000468 4.9e-06 53.1 34 70.6
Prupe.1G102600 Prunus persica HOM05D000384 ORTHO05D000468 4.9e-06 53.1 34 70.6
CANSAT56G3443 Cannabis sativa HOM05D000384 ORTHO05D000468 6.4e-06 52.8 34 67.6
FvH4_6g03700 Fragaria vesca HOM05D000384 ORTHO05D000468 6.4e-06 52.8 34 70.6
FAN02G1913 Fragaria x ananassa HOM05D000384 ORTHO05D000468 6.4e-06 52.8 34 70.6
FAN05G1931 Fragaria x ananassa HOM05D000384 ORTHO05D000468 6.4e-06 52.8 34 70.6
FAN05G5255 Fragaria x ananassa HOM05D000384 ORTHO05D000468 6.4e-06 52.8 34 70.6
FAN14G5179 Fragaria x ananassa HOM05D000384 ORTHO05D000468 6.4e-06 52.8 34 70.6
Lj6A608T68 Lonicera japonica HOM05D000384 ORTHO05D000468 6.4e-06 52.8 34 70.6
Lalb_Chr09g0328041 Lupinus albus HOM05D000384 ORTHO05D000468 6.4e-06 52.8 34 70.6
RcHm_v2.0_Chr3g0452241 Rosa chinensis HOM05D000384 ORTHO05D000468 6.4e-06 52.8 34 70.6
HanXRQChr02g0059101 Helianthus annuus HOM05D000384 ORTHO05D000468 8.3e-06 52.4 34 67.6
Sabra13G0106900 Salix brachista HOM05D000384 ORTHO05D000468 8.3e-06 52.4 34 67.6
SEGI_02113 Sequoiadendron giganteum HOM05D000384 ORTHO05D000468 8.3e-06 52.4 34 67.6
SEGI_20023 Sequoiadendron giganteum HOM05D000384 ORTHO05D000468 8.3e-06 52.4 34 64.7


User provided reference genes

Program Settings