Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c8_2960 Physcomitrium patens HOM05D005809 ORTHO05D007259 2.6e-124 448.7 230 100.0
Pp3c16_13530 Physcomitrium patens HOM05D005809 ORTHO05D007259 1.2e-108 396.7 218 93.1
SMO361G0343 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 3.9e-59 232.3 237 54.4
Mapoly0003s0072 Marchantia polymorpha HOM05D005809 ORTHO05D007259 7.3e-58 228.0 233 53.2
AagrBONN_evm.TU.Sc2ySwM_117.3948 Anthoceros agrestis HOM05D005809 ORTHO05D007259 9.5e-58 227.6 240 52.1
SEGI_31268 Sequoiadendron giganteum HOM05D005809 ORTHO05D007259 3.6e-57 225.7 235 54.0
Nn8g39891 Nelumbo nucifera HOM05D005809 ORTHO05D007259 2.3e-56 223.0 233 51.1
RcHm_v2.0_Chr2g0085671 Rosa chinensis HOM05D005809 ORTHO05D007259 1.5e-55 220.3 231 50.2
QL02p093215 Quercus lobata HOM05D005809 ORTHO05D007259 5.8e-55 218.4 233 49.8
SMO361G0248 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 9.8e-55 217.6 231 53.7
CARHR271730 Cardamine hirsuta HOM05D005809 ORTHO05D007259 1.7e-54 216.9 228 51.8
Hma1.2p1_0222F.1_g093550 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 2.2e-54 216.5 230 47.4
MD02G1007700 Malus domestica HOM05D005809 ORTHO05D007259 2.9e-54 216.1 234 48.7
Dinv41380 Davidia involucrata HOM05D005809 ORTHO05D007259 3.7e-54 215.7 242 48.3
Dinv43244 Davidia involucrata HOM05D005809 ORTHO05D007259 8.3e-54 214.5 235 48.9
FAN23G2666 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.1e-53 214.2 231 48.9
Cpa.g.sc46.154 Carica papaya HOM05D005809 ORTHO05D007259 1.4e-53 213.8 229 49.8
TWI32G0918 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 1.4e-53 213.8 227 49.8
Lj6g0016819 Lotus japonicus HOM05D005809 ORTHO05D007259 1.9e-53 213.4 230 46.5
Prupe.7G262800 Prunus persica HOM05D005809 ORTHO05D007259 2.4e-53 213.0 232 47.8
PGSC0003DMG401011139 Solanum tuberosum HOM05D005809 ORTHO05D007259 3.2e-53 212.6 231 51.5
GSVIVG01023603001 Vitis vinifera HOM05D005809 ORTHO05D007259 3.2e-53 212.6 232 49.1
Zm00001eb312980 Zea mays HOM05D005809 ORTHO05D007259 3.2e-53 212.6 231 47.6
Lalb_Chr23g0275681 Lupinus albus HOM05D005809 ORTHO05D007259 5.4e-53 211.8 232 47.8
Os09g0420600 Oryza sativa ssp. japonica HOM05D005809 ORTHO05D007259 5.4e-53 211.8 230 48.7
Sabra06G0140200 Salix brachista HOM05D005809 ORTHO05D007259 5.4e-53 211.8 234 49.6
AL8G34030 Arabidopsis lyrata HOM05D005809 ORTHO05D007259 7.0e-53 211.5 226 51.8
CsaV3_2G007490 Cucumis sativus L. HOM05D005809 ORTHO05D007259 9.2e-53 211.1 230 47.0
Duzib187G1947 Durio zibethinus HOM05D005809 ORTHO05D007259 9.2e-53 211.1 227 50.2
Solyc07g005640.3 Solanum lycopersicum HOM05D005809 ORTHO05D007259 9.2e-53 211.1 231 51.1
CANSAT11G2656 Cannabis sativa HOM05D005809 ORTHO05D007259 1.2e-52 210.7 231 47.2
COL.COLO4_18808 Corchorus olitorius HOM05D005809 ORTHO05D007259 1.2e-52 210.7 230 50.0
Thecc.09G030800 Theobroma cacao HOM05D005809 ORTHO05D007259 1.6e-52 210.3 230 47.0
CiPaw.15G168900 Carya illinoinensis HOM05D005809 ORTHO05D007259 2.0e-52 209.9 233 47.6
TWI34G1090 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 2.0e-52 209.9 235 47.7
Eucgr.C02492 Eucalyptus grandis HOM05D005809 ORTHO05D007259 2.7e-52 209.5 241 46.9
Medtr2g460780 Medicago truncatula HOM05D005809 ORTHO05D007259 2.7e-52 209.5 232 48.3
Sopen07g001740 Solanum pennellii HOM05D005809 ORTHO05D007259 2.7e-52 209.5 231 50.2
AT5G57950 Arabidopsis thaliana HOM05D005809 ORTHO05D007259 3.5e-52 209.1 227 50.2
A10p16200 Brassica napus HOM05D005809 ORTHO05D007259 3.5e-52 209.1 226 51.8
Gorai.009G057000 Gossypium raimondii HOM05D005809 ORTHO05D007259 3.5e-52 209.1 225 49.8
THA.LOC104817821 Tarenaya hassleriana HOM05D005809 ORTHO05D007259 3.5e-52 209.1 230 47.8
MELO3C004136.2 Cucumis melo HOM05D005809 ORTHO05D007259 4.6e-52 208.8 231 48.1
FvH4_1g00940 Fragaria vesca HOM05D005809 ORTHO05D007259 4.6e-52 208.8 224 49.6
CSS0045900 Camellia sinensis var. sinensis HOM05D005809 ORTHO05D007259 6.0e-52 208.4 235 47.2
Eucgr.C02542 Eucalyptus grandis HOM05D005809 ORTHO05D007259 6.0e-52 208.4 234 48.7
Carub.0008s1848 Capsella rubella HOM05D005809 ORTHO05D007259 1.0e-51 207.6 226 50.4
Gohir.D05G056000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 1.3e-51 207.2 225 49.3
Potri.006G184600 Populus trichocarpa HOM05D005809 ORTHO05D007259 1.3e-51 207.2 233 49.4
BraA10t43609Z Brassica rapa HOM05D005809 ORTHO05D007259 1.7e-51 206.8 226 50.9
Oeu052197.1 Olea europaea HOM05D005809 ORTHO05D007259 1.7e-51 206.8 235 48.9
Phvul.009G195100 Phaseolus vulgaris HOM05D005809 ORTHO05D007259 1.7e-51 206.8 230 47.8
BolC9t57830H Brassica oleracea HOM05D005809 ORTHO05D007259 2.3e-51 206.5 228 50.0
Migut.J01341 Erythranthe guttata HOM05D005809 ORTHO05D007259 2.3e-51 206.5 230 47.0
C09p49790 Brassica napus HOM05D005809 ORTHO05D007259 3.9e-51 205.7 228 50.0
Ciclev10009378m.g Citrus clementina HOM05D005809 ORTHO05D007259 3.9e-51 205.7 233 48.1
Manes.06G033951 Manihot esculenta HOM05D005809 ORTHO05D007259 3.9e-51 205.7 233 49.8
Atru.chr7.51 Acer truncatum HOM05D005809 ORTHO05D007259 6.6e-51 204.9 234 48.3
MSTRG.19648 Avicennia marina HOM05D005809 ORTHO05D007259 6.6e-51 204.9 231 48.5
arahy.Tifrunner.gnm1.ann1.46B1EJ Arachis hypogaea HOM05D005809 ORTHO05D007259 8.6e-51 204.5 225 48.9
Thhalv10014592m.g Eutrema salsugineum HOM05D005809 ORTHO05D007259 1.1e-50 204.1 224 50.0
Sp6g19620 Schrenkiella parvula HOM05D005809 ORTHO05D007259 1.1e-50 204.1 226 50.0
Sed0001225 Sechium edule HOM05D005809 ORTHO05D007259 1.9e-50 203.4 235 47.2
arahy.Tifrunner.gnm1.ann1.Z5GGTZ Arachis hypogaea HOM05D005809 ORTHO05D007259 5.6e-50 201.8 225 48.9
TPR.G20735 Trifolium pratense HOM05D005809 ORTHO05D007259 7.3e-50 201.4 232 46.6
SalBow1G5910 Salvia bowleyana HOM05D005809 ORTHO05D007259 1.2e-49 200.7 223 48.9
PSO782G1751 Papaver somniferum HOM05D005809 ORTHO05D007259 1.6e-49 200.3 230 47.8
PGR102G1797 Punica granatum HOM05D005809 ORTHO05D007259 1.6e-49 200.3 230 47.0
Ca_03733_v3 Cicer arietinum L. HOM05D005809 ORTHO05D007259 2.8e-49 199.5 234 44.9
Glyma.06G219400 Glycine max HOM05D005809 ORTHO05D007259 2.8e-49 199.5 230 46.1
ATR0739G206 Amborella trichopoda HOM05D005809 ORTHO05D007259 4.7e-49 198.7 234 46.6
Aqoxy2G02328 Aquilegia oxysepala HOM05D005809 ORTHO05D007259 4.7e-49 198.7 230 47.0
TAR636G3217 Trochodendron aralioides HOM05D005809 ORTHO05D007259 4.7e-49 198.7 233 46.4
CDE12G0564 Ceratophyllum demersum HOM05D005809 ORTHO05D007259 6.2e-49 198.4 256 45.7
Aa31LG3G13770 Aethionema arabicum HOM05D000853 ORTHO05D000723 1.1e-48 197.6 227 48.5
ECA247G0266 Erigeron canadensis HOM05D005809 ORTHO05D007259 2.3e-48 196.4 231 46.8
Psat1g021800 Pisum sativum HOM05D005809 ORTHO05D007259 2.3e-48 196.4 230 46.1
PSO063G2086 Papaver somniferum HOM05D005809 ORTHO05D007259 3.1e-48 196.1 230 47.0
HanXRQChr17g0552351 Helianthus annuus HOM05D005809 ORTHO05D007259 4.0e-48 195.7 230 46.1
Glyma.06G219200 Glycine max HOM05D005809 ORTHO05D007259 8.9e-48 194.5 228 45.6
Ah.02g128190 Amaranthus hybridus HOM05D005809 ORTHO05D007259 4.4e-47 192.2 230 45.2
CAN.G160.58 Capsicum annuum HOM05D005809 ORTHO05D007259 4.4e-47 192.2 234 47.0
HPP92_016019 Vanilla planifolia HOM05D005809 ORTHO05D007259 4.4e-47 192.2 232 45.7
Haze_19206 Corylus avellana HOM05D005809 ORTHO05D007259 7.5e-47 191.4 226 45.1
Duzib168G0271 Durio zibethinus HOM05D005809 ORTHO05D007259 9.8e-47 191.0 225 47.6
Sc08g0005640 Simmondsia chinensis HOM05D005809 ORTHO05D007259 2.2e-46 189.9 236 44.1
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 2.9e-46 189.5 234 43.2
Actinidia04301 Actinidia chinensis HOM05D005809 ORTHO05D007259 3.9e-43 179.1 230 44.3
vmacro16802 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 3.3e-42 176.0 284 40.5
HPP92_016035 Vanilla planifolia HOM05D005809 ORTHO05D007259 4.3e-42 175.6 211 45.0
Peaxi162Scf00401g00082 Petunia axillaris HOM05D005809 ORTHO05D007259 9.5e-42 174.5 217 46.5
ClCG02G014530 Citrullus lanatus HOM05D005809 ORTHO05D007259 2.8e-41 172.9 212 44.3
SGA_v2.0_scaffold265G46107 Striga asiatica HOM05D005809 ORTHO05D007259 2.8e-41 172.9 223 43.9
Lsat_1_v5_gn_8_63301 Lactuca sativa HOM05D005809 ORTHO05D007259 6.2e-41 171.8 243 41.2
Rhsim01G0033400 Rhododendron simsii HOM05D005809 ORTHO05D007259 1.1e-40 171.0 228 43.9
DCAR_017909 Daucus carota HOM05D005809 ORTHO05D007259 4.0e-40 169.1 252 39.7
Nitab4.5_0005653g0040 Nicotiana tabacum HOM05D005809 ORTHO05D007259 5.2e-40 168.7 230 43.9
AUR62035200 Chenopodium quinoa HOM05D005809 ORTHO05D007259 2.2e-38 163.3 230 41.3
Gohir.A05G055000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 2.2e-38 163.3 230 43.0
Nitab4.5_0001571g0010 Nicotiana tabacum HOM05D005809 ORTHO05D007259 1.1e-37 161.0 243 40.7
Hund01517 Selenicereus undatus HOM05D005809 ORTHO05D007259 1.0e-35 154.5 223 38.6
FAN28G0834 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.5e-34 150.6 233 39.9
Lj9C717G7 Lonicera japonica HOM05D005809 ORTHO05D007259 3.3e-34 149.4 226 40.7
SHI02853 Sapria himalayana HOM05D005809 ORTHO05D007259 7.3e-34 148.3 218 38.5
CBR_g38078 Chara braunii HOM05D000019 ORTHO05D000048 6.8e-32 141.7 265 36.2
Actinidia38322 Actinidia chinensis HOM05D005809 ORTHO05D007259 1.2e-31 141.0 165 47.3
vmacro05441 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 3.2e-29 132.9 192 41.7
Dinv42856 Davidia involucrata HOM05D005809 ORTHO05D007259 7.1e-29 131.7 167 43.7
Sed0002126 Sechium edule HOM05D005809 ORTHO05D007259 9.2e-29 131.3 161 46.0
MCO13G469 Micromonas commoda HOM05D005809 ORTHO05D007259 1.6e-28 130.6 214 39.3
Cc06_g14990 Coffea canephora HOM05D005809 ORTHO05D007259 1.1e-26 124.4 111 55.9
Hma1.2p1_0010F.1_g006710 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 1.1e-26 124.4 158 40.5
Cre04.g226950 Chlamydomonas reinhardtii HOM05D005809 ORTHO05D007259 4.0e-24 115.9 279 31.2
PRCOL_00000214 Prasinoderma coloniale HOM05D005809 ORTHO05D007259 1.6e-20 104.0 204 36.8
Cc06_g14980 Coffea canephora HOM05D005809 ORTHO05D007259 1.7e-19 100.5 93 53.8
RcHm_v2.0_Chr5g0031291 Rosa chinensis HOM05D005809 ORTHO05D007259 6.6e-19 98.6 124 45.2
EL10As1g23143 Beta vulgaris HOM05D005809 ORTHO05D007259 1.9e-18 97.1 87 54.0
Aa31LG1G19310 Aethionema arabicum HOM05D005809 ORTHO05D007259 2.8e-17 93.2 95 47.4
FAN25G0559 Fragaria x ananassa HOM05D005809 ORTHO05D007259 5.3e-16 89.0 108 43.5
FAN21G3780 Fragaria x ananassa HOM05D005809 ORTHO05D007259 9.9e-15 84.7 193 32.1
Hma1.2p1_0222F.1_g093570 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 8.4e-14 81.6 73 57.5
Oeu007777.1 Olea europaea HOM05D005809 ORTHO05D007259 7.9e-12 75.1 83 41.0
Oeu038698.1 Olea europaea HOM05D005809 ORTHO05D007259 7.9e-12 75.1 83 39.8
EL10As1g23140 Beta vulgaris HOM05D005809 ORTHO05D007259 3.9e-11 72.8 63 55.6
Oeu049715.1 Olea europaea HOM05D005809 ORTHO05D007259 8.7e-11 71.6 82 37.8
Oeu017561.1 Olea europaea HOM05D005809 ORTHO05D007259 7.4e-10 68.6 83 37.3
FAN26G2229 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.2e-07 61.2 62 46.8
FvH4_3g18530 Fragaria vesca HOM05D005809 ORTHO05D007259 3.4e-07 59.7 169 30.8
FAN11G2737 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.4e-07 59.7 169 30.8
Oeu029241.1 Olea europaea HOM05D005809 ORTHO05D007259 3.8e-06 56.2 75 33.3


User provided reference genes

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