Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c6_11480 Physcomitrium patens HOM05D005964 ORTHO05D007242 5.4e-184 647.5 324 100.0
Mapoly0153s0025 Marchantia polymorpha HOM05D005964 ORTHO05D007242 1.9e-64 250.4 310 44.5
SEGI_32375 Sequoiadendron giganteum HOM05D005964 ORTHO05D007242 6.0e-34 149.1 190 37.4
Aqoxy7G00888 Aquilegia oxysepala HOM05D005964 ORTHO05D007242 6.7e-25 119.0 234 30.8
SMO169G0249 Selaginella moellendorffii HOM05D005964 ORTHO05D007242 6.7e-25 119.0 276 30.8
ATR0829G145 Amborella trichopoda HOM05D005964 ORTHO05D007242 2.5e-24 117.1 148 41.9
Prupe.5G020400 Prunus persica HOM05D005964 ORTHO05D007242 5.7e-24 115.9 281 32.0
Medtr5g026860 Medicago truncatula HOM05D005964 ORTHO05D007242 9.7e-24 115.2 231 33.8
PSO717G0069 Papaver somniferum HOM05D005964 ORTHO05D007242 1.3e-23 114.8 121 42.1
MD00G1001800 Malus domestica HOM05D005964 ORTHO05D007242 1.6e-23 114.4 237 31.2
Thecc.03G317600 Theobroma cacao HOM05D005964 ORTHO05D007242 4.8e-23 112.8 210 31.9
CDE12G0810 Ceratophyllum demersum HOM05D005964 ORTHO05D007242 1.1e-22 111.7 225 34.7
Potri.001G130900 Populus trichocarpa HOM05D005964 ORTHO05D007242 1.1e-22 111.7 292 31.2
Glyma.01G149400 Glycine max HOM05D005964 ORTHO05D007242 1.4e-22 111.3 284 32.4
Glyma.09G213600 Glycine max HOM05D005964 ORTHO05D007242 1.4e-22 111.3 284 31.7
Duzib205G1143 Durio zibethinus HOM05D005964 ORTHO05D007242 1.8e-22 110.9 200 34.5
AUR62018605 Chenopodium quinoa HOM05D005964 ORTHO05D007242 5.3e-22 109.4 227 34.8
Psat2g142160 Pisum sativum HOM05D005964 ORTHO05D007242 5.3e-22 109.4 283 29.7
Nn1g02066 Nelumbo nucifera HOM05D005964 ORTHO05D007242 6.9e-22 109.0 160 38.1
TPR.G17260 Trifolium pratense HOM05D005964 ORTHO05D007242 6.9e-22 109.0 228 31.6
Cc08_g05080 Coffea canephora HOM05D005964 ORTHO05D007242 9.0e-22 108.6 203 32.5
Gohir.D08G171200 Gossypium hirsutum HOM05D005964 ORTHO05D007242 9.0e-22 108.6 187 36.4
AagrBONN_evm.TU.Sc2ySwM_344.1651 Anthoceros agrestis HOM05D005964 ORTHO05D007242 1.2e-21 108.2 155 35.5
Gorai.004G178600 Gossypium raimondii HOM05D005964 ORTHO05D007242 1.2e-21 108.2 187 36.4
Nitab4.5_0000030g0090 Nicotiana tabacum HOM05D005964 ORTHO05D007242 1.2e-21 108.2 257 28.8
TWI12G1028 Tripterygium wilfordii HOM05D005964 ORTHO05D007242 2.0e-21 107.5 260 31.9
Dinv22873 Davidia involucrata HOM05D005964 ORTHO05D007242 2.6e-21 107.1 265 30.9
Dinv28013 Davidia involucrata HOM05D005964 ORTHO05D007242 2.6e-21 107.1 281 29.5
Gohir.A03G000012 Gossypium hirsutum HOM05D005964 ORTHO05D007242 2.6e-21 107.1 253 30.0
PSO675G7054 Papaver somniferum HOM05D005964 ORTHO05D007242 2.6e-21 107.1 234 27.8
Duzib084G0482 Durio zibethinus HOM05D005964 ORTHO05D007242 3.4e-21 106.7 196 33.2
TAR381G0569 Trochodendron aralioides HOM05D005964 ORTHO05D007242 3.4e-21 106.7 250 30.4
BcaC09g51437 Brassica carinata HOM05D005964 ORTHO05D007242 4.5e-21 106.3 292 29.1
Gohir.D03G177900 Gossypium hirsutum HOM05D005964 ORTHO05D007242 4.5e-21 106.3 237 30.8
Gorai.003G187200 Gossypium raimondii HOM05D005964 ORTHO05D007242 4.5e-21 106.3 237 30.8
CANSAT21G0049 Cannabis sativa HOM05D005964 ORTHO05D007242 5.9e-21 105.9 235 31.5
Hma1.2p1_0544F.1_g175510 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 5.9e-21 105.9 174 37.4
Hma1.2p1_0544F.1_g175520 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 5.9e-21 105.9 174 37.4
Os04g0600400 Oryza sativa ssp. japonica HOM05D005964 ORTHO05D007242 5.9e-21 105.9 267 30.0
Lalb_Chr05g0215451 Lupinus albus HOM05D005964 ORTHO05D007242 7.7e-21 105.5 287 30.0
VMungo1215G0316 Vigna mungo HOM05D005964 ORTHO05D007242 7.7e-21 105.5 279 29.7
HanXRQChr13g0412031 Helianthus annuus HOM05D005964 ORTHO05D007242 1.0e-20 105.1 269 30.5
EL10Ac5g11971 Beta vulgaris HOM05D005964 ORTHO05D007242 1.7e-20 104.4 221 33.5
MD06G1015300 Malus domestica HOM05D005964 ORTHO05D007242 1.7e-20 104.4 234 30.3
Potri.003G103000 Populus trichocarpa HOM05D005964 ORTHO05D007242 1.7e-20 104.4 262 30.5
MELO3C013795.2 Cucumis melo HOM05D005964 ORTHO05D007242 2.2e-20 104.0 285 34.0
FvH4_5g23960 Fragaria vesca HOM05D005964 ORTHO05D007242 2.2e-20 104.0 283 29.7
FAN13G2421 Fragaria x ananassa HOM05D005964 ORTHO05D007242 2.2e-20 104.0 283 29.7
Peaxi162Scf02295g00024 Petunia axillaris HOM05D005964 ORTHO05D007242 2.2e-20 104.0 118 42.4
PGR042G2449 Punica granatum HOM05D005964 ORTHO05D007242 2.2e-20 104.0 223 31.8
FAN18G2518 Fragaria x ananassa HOM05D005964 ORTHO05D007242 2.9e-20 103.6 283 29.7
Sp7g17840 Schrenkiella parvula HOM05D005964 ORTHO05D007242 3.8e-20 103.2 259 30.5
Gohir.A08G150100 Gossypium hirsutum HOM05D005964 ORTHO05D007242 5.0e-20 102.8 191 34.6
Sed0000446 Sechium edule HOM05D005964 ORTHO05D007242 5.0e-20 102.8 279 33.0
Sc01g0007030 Simmondsia chinensis HOM05D005964 ORTHO05D007242 6.5e-20 102.4 273 30.8
MBI04_g27277_MAGBIO Magnolia biondii HOM05D005964 ORTHO05D007242 1.4e-19 101.3 280 27.5
THA.LOC104811073 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 1.4e-19 101.3 287 30.0
Zm00001eb071860 Zea mays HOM05D005964 ORTHO05D007242 1.4e-19 101.3 290 29.3
A01p11100 Brassica napus HOM05D005964 ORTHO05D007242 1.9e-19 100.9 297 27.9
BraA01t01056Z Brassica rapa HOM05D005964 ORTHO05D007242 1.9e-19 100.9 297 27.9
Lj8A334G75 Lonicera japonica HOM05D005964 ORTHO05D007242 1.9e-19 100.9 277 30.3
Phvul.002G128700 Phaseolus vulgaris HOM05D005964 ORTHO05D007242 1.9e-19 100.9 184 34.8
Sabra03G0070200 Salix brachista HOM05D005964 ORTHO05D007242 1.9e-19 100.9 235 30.6
Eucgr.E01230 Eucalyptus grandis HOM05D005964 ORTHO05D007242 2.5e-19 100.5 278 29.1
Eucgr.E01239 Eucalyptus grandis HOM05D005964 ORTHO05D007242 2.5e-19 100.5 278 29.1
RcHm_v2.0_Chr7g0213391 Rosa chinensis HOM05D005964 ORTHO05D007242 2.5e-19 100.5 282 28.7
GSVIVG01022785001 Vitis vinifera HOM05D005964 ORTHO05D007242 2.5e-19 100.5 227 30.4
Ciclev10002048m.g Citrus clementina HOM05D005964 ORTHO05D007242 3.2e-19 100.1 199 32.2
CsaV3_3G001060 Cucumis sativus L. HOM05D005964 ORTHO05D007242 3.2e-19 100.1 281 32.4
DCAR_008183 Daucus carota HOM05D005964 ORTHO05D007242 3.2e-19 100.1 188 35.1
AL7G34950 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 5.5e-19 99.4 261 29.9
CiPaw.11G103200 Carya illinoinensis HOM05D005964 ORTHO05D007242 5.5e-19 99.4 208 31.7
CBR_g24057 Chara braunii HOM05D005964 ORTHO05D007242 5.5e-19 99.4 118 37.3
BcaNung04009 Brassica carinata HOM05D005964 ORTHO05D007242 7.2e-19 99.0 290 30.0
C01p13130 Brassica napus HOM05D005964 ORTHO05D007242 7.2e-19 99.0 304 28.3
BolC1t01286H Brassica oleracea HOM05D005964 ORTHO05D007242 7.2e-19 99.0 304 28.3
Lsat_1_v5_gn_5_58981 Lactuca sativa HOM05D005964 ORTHO05D007242 7.2e-19 99.0 267 31.5
Nitab4.5_0002930g0010 Nicotiana tabacum HOM05D005964 ORTHO05D007242 7.2e-19 99.0 272 27.2
Sopen08g024420 Solanum pennellii HOM05D005964 ORTHO05D007242 7.2e-19 99.0 294 26.5
Carub.0007s2201 Capsella rubella HOM05D005964 ORTHO05D007242 9.4e-19 98.6 244 29.5
ECA240G3292 Erigeron canadensis HOM05D005964 ORTHO05D007242 9.4e-19 98.6 289 29.8
Migut.E01349 Erythranthe guttata HOM05D005964 ORTHO05D007242 1.2e-18 98.2 275 32.0
Solyc08g075770.3 Solanum lycopersicum HOM05D005964 ORTHO05D007242 1.2e-18 98.2 294 26.5
Thhalv10025843m.g Eutrema salsugineum HOM05D005964 ORTHO05D007242 1.6e-18 97.8 228 30.7
SalBow8G2874 Salvia bowleyana HOM05D005964 ORTHO05D007242 2.1e-18 97.4 191 30.4
BcaNung03076 Brassica carinata HOM05D005964 ORTHO05D007242 2.7e-18 97.1 234 30.3
FAN18G4345 Fragaria x ananassa HOM05D005964 ORTHO05D007242 2.7e-18 97.1 153 36.6
AT4G19140 Arabidopsis thaliana HOM05D005964 ORTHO05D007242 3.6e-18 96.7 242 30.6
Cfa012590 Carpinus fangiana HOM05D005964 ORTHO05D007242 3.6e-18 96.7 222 31.5
QL12p001050 Quercus lobata HOM05D005964 ORTHO05D007242 4.6e-18 96.3 112 42.0
Actinidia14743 Actinidia chinensis HOM05D005964 ORTHO05D007242 6.1e-18 95.9 271 28.8
arahy.Tifrunner.gnm1.ann1.NL6YXC Arachis hypogaea HOM05D005964 ORTHO05D007242 6.1e-18 95.9 283 28.6
arahy.Tifrunner.gnm1.ann1.PBCI2P Arachis hypogaea HOM05D005964 ORTHO05D007242 6.1e-18 95.9 283 28.6
HanXRQChr03g0081171 Helianthus annuus HOM05D005964 ORTHO05D007242 6.1e-18 95.9 174 36.2
unitig_899.g14736 Utricularia gibba HOM05D005964 ORTHO05D007242 6.1e-18 95.9 198 31.3
Manes.17G003600 Manihot esculenta HOM05D005964 ORTHO05D007242 1.4e-17 94.7 281 29.5
Oeu046805.1 Olea europaea HOM05D005964 ORTHO05D007242 1.4e-17 94.7 275 26.5
Atru.chr6.1471 Acer truncatum HOM05D005964 ORTHO05D007242 1.8e-17 94.4 234 30.8
CARHR226010 Cardamine hirsuta HOM05D005964 ORTHO05D007242 2.3e-17 94.0 257 27.6
MSTRG.13905 Avicennia marina HOM05D005964 ORTHO05D007242 3.9e-17 93.2 154 36.4
BcaC06g30611 Brassica carinata HOM05D005964 ORTHO05D007242 5.1e-17 92.8 287 28.6
MSTRG.1771 Avicennia marina HOM05D005964 ORTHO05D007242 8.8e-17 92.0 227 35.2
Rhsim07G0138900 Rhododendron simsii HOM05D005964 ORTHO05D007242 1.1e-16 91.7 239 29.7
THA.LOC104806194 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 1.5e-16 91.3 131 35.9
Actinidia18160 Actinidia chinensis HOM05D005964 ORTHO05D007242 2.0e-16 90.9 274 28.1
Lj2g0015502 Lotus japonicus HOM05D005964 ORTHO05D007242 2.0e-16 90.9 283 29.0
PSO717G0022 Papaver somniferum HOM05D005964 ORTHO05D007242 2.0e-16 90.9 107 40.2
Aa31LG6G1830 Aethionema arabicum HOM05D005964 ORTHO05D007242 1.7e-15 87.8 224 29.9
BolC7t45529H Brassica oleracea HOM05D005964 ORTHO05D007242 1.7e-15 87.8 247 28.7
CSS0036776 Camellia sinensis var. sinensis HOM05D005964 ORTHO05D007242 1.7e-15 87.8 228 29.8
AUR62007382 Chenopodium quinoa HOM05D005964 ORTHO05D007242 1.7e-15 87.8 230 33.0
SGA_v2.0_scaffold111G31365 Striga asiatica HOM05D005964 ORTHO05D007242 1.8e-14 84.3 282 28.7
vmacro14234 Vaccinium macrocarpon HOM05D005964 ORTHO05D007242 5.3e-14 82.8 103 38.8
arahy.Tifrunner.gnm1.ann1.MDU2JP Arachis hypogaea HOM05D005964 ORTHO05D007242 1.5e-13 81.3 176 30.7
Sabra01G0101200 Salix brachista HOM05D005964 ORTHO05D007242 3.8e-12 76.6 202 27.7
BraA03t14264Z Brassica rapa HOM05D005964 ORTHO05D007242 5.0e-12 76.3 283 28.3
C07p50270 Brassica napus HOM05D005964 ORTHO05D007242 1.1e-11 75.1 111 37.8
Hund11143 Selenicereus undatus HOM05D005964 ORTHO05D007242 7.2e-11 72.4 199 28.6
A03p51750 Brassica napus HOM05D005964 ORTHO05D007242 4.7e-10 69.7 137 35.8
HPP92_021116 Vanilla planifolia HOM05D005964 ORTHO05D007242 4.8e-07 59.7 187 25.7
Ah.12g055850 Amaranthus hybridus HOM05D005964 ORTHO05D007242 7.0e-06 55.8 184 26.1


User provided reference genes

Program Settings