Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 8.4e-91 337.0 175 100.0
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 9.5e-34 147.5 161 53.4
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 1.1e-29 134.0 151 47.7
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 3.5e-28 129.0 173 43.4
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 1.8e-24 116.7 118 50.0
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 1.8e-24 116.7 136 47.8
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 2.3e-24 116.3 120 49.2
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 1.2e-23 114.0 133 43.6
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 1.5e-23 113.6 115 51.3
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 1.5e-23 113.6 115 51.3
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 2.6e-23 112.8 118 47.5
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 2.6e-23 112.8 118 47.5
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 3.4e-23 112.5 153 41.8
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 3.4e-23 112.5 146 42.5
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 4.4e-23 112.1 119 51.3
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 5.8e-23 111.7 119 50.4
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 5.8e-23 111.7 186 39.8
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 5.8e-23 111.7 120 50.8
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 7.5e-23 111.3 137 44.5
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 9.8e-23 110.9 132 43.9
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 9.8e-23 110.9 119 48.7
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 9.8e-23 110.9 135 45.2
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 9.8e-23 110.9 133 46.6
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 1.3e-22 110.5 120 47.5
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 1.3e-22 110.5 115 50.4
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 1.3e-22 110.5 115 50.4
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 1.7e-22 110.2 147 43.5
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 2.2e-22 109.8 137 46.0
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 2.9e-22 109.4 118 47.5
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 2.9e-22 109.4 118 47.5
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 2.9e-22 109.4 133 45.9
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 3.7e-22 109.0 133 46.6
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 3.7e-22 109.0 135 44.4
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 3.7e-22 109.0 132 46.2
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 4.9e-22 108.6 118 48.3
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 4.9e-22 108.6 104 51.0
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 4.9e-22 108.6 167 38.9
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 4.9e-22 108.6 124 46.8
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 6.4e-22 108.2 127 46.5
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 6.4e-22 108.2 118 46.6
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 6.4e-22 108.2 115 47.8
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 8.3e-22 107.8 127 45.7
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 8.3e-22 107.8 127 45.7
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 8.3e-22 107.8 124 47.6
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 1.1e-21 107.5 134 41.8
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 1.1e-21 107.5 137 41.6
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 1.9e-21 106.7 137 44.5
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 1.9e-21 106.7 133 42.9
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.9e-21 106.7 127 45.7
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 1.9e-21 106.7 115 47.0
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 2.4e-21 106.3 118 48.3
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 2.4e-21 106.3 135 45.2
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 2.4e-21 106.3 115 47.8
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 3.2e-21 105.9 119 47.9
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 4.1e-21 105.5 133 42.9
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 4.1e-21 105.5 118 48.3
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 4.1e-21 105.5 135 43.7
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 4.1e-21 105.5 135 42.2
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 4.1e-21 105.5 138 44.9
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 4.1e-21 105.5 131 44.3
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 5.4e-21 105.1 174 40.2
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 5.4e-21 105.1 137 43.1
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 5.4e-21 105.1 144 41.0
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 5.4e-21 105.1 135 40.7
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 7.1e-21 104.8 118 47.5
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 7.1e-21 104.8 118 47.5
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 7.1e-21 104.8 118 47.5
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 7.1e-21 104.8 118 47.5
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 7.1e-21 104.8 118 47.5
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 7.1e-21 104.8 119 45.4
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 7.1e-21 104.8 158 41.1
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 9.2e-21 104.4 143 42.0
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 9.2e-21 104.4 139 43.9
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 1.2e-20 104.0 140 45.0
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 1.2e-20 104.0 136 41.9
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 1.2e-20 104.0 143 41.3
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 1.2e-20 104.0 120 45.8
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 1.2e-20 104.0 115 47.0
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 1.6e-20 103.6 157 42.7
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 1.6e-20 103.6 147 41.5
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 2.1e-20 103.2 120 45.8
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 2.7e-20 102.8 119 47.1
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 2.7e-20 102.8 159 37.7
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 3.5e-20 102.4 124 44.4
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 3.5e-20 102.4 144 41.7
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 3.5e-20 102.4 102 52.0
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 3.5e-20 102.4 136 40.4
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 4.6e-20 102.1 145 40.0
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 6.0e-20 101.7 114 43.9
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 6.0e-20 101.7 135 40.0
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 6.0e-20 101.7 146 42.5
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 7.8e-20 101.3 148 41.9
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 7.8e-20 101.3 129 45.0
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 7.8e-20 101.3 177 36.7
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 1.0e-19 100.9 136 42.6
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 1.3e-19 100.5 127 43.3
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 1.7e-19 100.1 99 49.5
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 3.0e-19 99.4 140 42.1
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 4.3e-18 95.5 116 43.1
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 5.6e-18 95.1 123 39.8
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 9.5e-18 94.4 151 37.1
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 8.1e-17 91.3 128 40.6
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 6.8e-16 88.2 150 36.0
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 2.0e-15 86.7 114 40.4
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 1.7e-11 73.6 125 39.2
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 5.1e-11 72.0 81 46.9
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 2.8e-09 66.2 92 42.4
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 2.8e-09 66.2 92 42.4
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 2.8e-09 66.2 92 42.4
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 2.6e-07 59.7 95 40.0
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.3e-06 57.4 41 56.1


User provided reference genes

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