Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_16100 Physcomitrium patens HOM05D000528 ORTHO05D015583 1.1e-10 68.6 33 100.0
Pp3c18_8290 Physcomitrium patens HOM05D000528 ORTHO05D000999 4.4e-09 63.2 33 84.8
Pp3c21_12020 Physcomitrium patens HOM05D000528 ORTHO05D000999 1.7e-08 61.2 33 87.9
Pp3c21_12080 Physcomitrium patens HOM05D000528 ORTHO05D000999 1.7e-08 61.2 33 87.9
SGA_v2.0_scaffold122G33228 Striga asiatica HOM05D000528 ORTHO05D000999 2.2e-08 60.8 33 84.8
CBR_g5727 Chara braunii HOM05D000528 ORTHO05D000999 2.9e-08 60.5 33 84.8
Migut.F01825 Erythranthe guttata HOM05D000528 ORTHO05D000999 3.8e-08 60.1 33 84.8
Mapoly0003s0171 Marchantia polymorpha HOM05D000528 ORTHO05D000999 3.8e-08 60.1 33 87.9
Peaxi162Scf00006g03411 Petunia axillaris HOM05D000528 ORTHO05D000999 3.8e-08 60.1 33 84.8
SalBow3G2418 Salvia bowleyana HOM05D000528 ORTHO05D000999 3.8e-08 60.1 33 84.8
AagrBONN_evm.TU.Sc2ySwM_117.2707 Anthoceros agrestis HOM05D000528 ORTHO05D000999 4.9e-08 59.7 33 84.8
AagrBONN_evm.TU.Sc2ySwM_117.2712 Anthoceros agrestis HOM05D000528 ORTHO05D000999 4.9e-08 59.7 33 84.8
Prupe.7G189500 Prunus persica HOM05D000528 ORTHO05D000999 4.9e-08 59.7 33 84.8
Lsat_1_v5_gn_1_84121 Lactuca sativa HOM05D000528 ORTHO05D000999 6.4e-08 59.3 33 87.9
Lalb_Chr07g0181491 Lupinus albus HOM05D000528 ORTHO05D000999 6.4e-08 59.3 33 84.8
Lalb_Chr12g0200411 Lupinus albus HOM05D000528 ORTHO05D000999 6.4e-08 59.3 33 84.8
Sed0018294 Sechium edule HOM05D000528 ORTHO05D000999 6.4e-08 59.3 33 84.8
TWI34G0978 Tripterygium wilfordii HOM05D000528 ORTHO05D000999 6.4e-08 59.3 33 84.8
Actinidia39603 Actinidia chinensis HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
CSS0027335 Camellia sinensis var. sinensis HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
CANSAT56G4237 Cannabis sativa HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
CAN.G8.14 Capsicum annuum HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
Cfa021584 Carpinus fangiana HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
CiPaw.08G000100 Carya illinoinensis HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
CDE06G1665 Ceratophyllum demersum HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
Ca_21350_v3 Cicer arietinum L. HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
ClCG05G002580 Citrullus lanatus HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
Cc09_g04400 Coffea canephora HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
Haze_21237 Corylus avellana HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
MELO3C006224.2 Cucumis melo HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
CsaV3_3G010020 Cucumis sativus L. HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
Dinv25491 Davidia involucrata HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
Dinv42440 Davidia involucrata HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
ECA234G2762 Erigeron canadensis HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
Eucgr.C00756 Eucalyptus grandis HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
FvH4_1g09670 Fragaria vesca HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
FAN06G2987 Fragaria x ananassa HOM05D010020 ORTHO05D015583 8.4e-08 58.9 33 84.8
FAN08G2458 Fragaria x ananassa HOM05D000528 ORTHO05D015583 8.4e-08 58.9 33 84.8
FAN19G1221 Fragaria x ananassa HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
FAN20G0047 Fragaria x ananassa HOM05D000528 ORTHO05D015583 8.4e-08 58.9 33 84.8
FAN23G1517 Fragaria x ananassa HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
FAN23G1603 Fragaria x ananassa HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
FAN26G1955 Fragaria x ananassa HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
FAN26G3208 Fragaria x ananassa HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
FAN28G2663 Fragaria x ananassa HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
HanXRQChr16g0521011 Helianthus annuus HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
Hma1.2p1_0179F.1_g079070 Hydrangea macrophylla HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
Lsat_1_v5_gn_4_40140 Lactuca sativa HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
Lj1A1154G40 Lonicera japonica HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
MD02G1105600 Malus domestica HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
MD15G1225500 Malus domestica HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
Nitab4.5_0000219g0110 Nicotiana tabacum HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
Nitab4.5_0006028g0020 Nicotiana tabacum HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
Oeu007685.1 Olea europaea HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
Psat4g020000 Pisum sativum HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
Potri.006G216900 Populus trichocarpa HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
Rhsim02G0256900 Rhododendron simsii HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
RcHm_v2.0_Chr2g0096511 Rosa chinensis HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
Sabra06G0167300 Salix brachista HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
Solyc12g017830.3 Solanum lycopersicum HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
Sopen12g008630 Solanum pennellii HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
TPR.G12643 Trifolium pratense HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
vmacro06377 Vaccinium macrocarpon HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
GSVIVG01014993001 Vitis vinifera HOM05D000528 ORTHO05D000999 8.4e-08 58.9 33 84.8
MSTRG.8180 Avicennia marina HOM05D000528 ORTHO05D000999 1.1e-07 58.5 33 81.8
DCAR_027484 Daucus carota HOM05D000528 ORTHO05D000999 1.1e-07 58.5 33 84.8
Medtr4g124430 Medicago truncatula HOM05D000528 ORTHO05D000999 1.1e-07 58.5 33 84.8
AUR62023914 Chenopodium quinoa HOM05D000528 ORTHO05D000999 1.4e-07 58.2 33 84.8
AUR62038332 Chenopodium quinoa HOM05D000528 ORTHO05D000999 1.4e-07 58.2 33 84.8
Lj4g0008783 Lotus japonicus HOM05D000528 ORTHO05D000999 1.4e-07 58.2 33 84.8
Sed0012879 Sechium edule HOM05D000528 ORTHO05D000999 1.4e-07 58.2 33 84.8
Ciclev10007246m.g Citrus clementina HOM05D000528 ORTHO05D000999 1.9e-07 57.8 33 81.8
Glyma.13G115800 Glycine max HOM05D000528 ORTHO05D000999 1.9e-07 57.8 33 81.8
Glyma.17G044000 Glycine max HOM05D000528 ORTHO05D000999 1.9e-07 57.8 33 81.8
HanXRQChr01g0017721 Helianthus annuus HOM05D000528 ORTHO05D000999 1.9e-07 57.8 33 81.8
Nn6g31501 Nelumbo nucifera HOM05D000528 ORTHO05D000999 1.9e-07 57.8 33 81.8
Aa31LG4G12930 Aethionema arabicum HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
ATR0006G069 Amborella trichopoda HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
Aqoxy6G02695 Aquilegia oxysepala HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
AL5G21370 Arabidopsis lyrata HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
AT3G43300 Arabidopsis thaliana HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
arahy.Tifrunner.gnm1.ann1.JF9XSQ Arachis hypogaea HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
arahy.Tifrunner.gnm1.ann1.Z2MV1Y Arachis hypogaea HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
BcaB02g10779 Brassica carinata HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
BcaC01g02206 Brassica carinata HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
A06p26630 Brassica napus HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
C03p67850 Brassica napus HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
BolSC21t60253H Brassica oleracea HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
BraA06t25597Z Brassica rapa HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
Carub.0005s0916 Capsella rubella HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
CARHR153370 Cardamine hirsuta HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
Cpa.g.sc82.36 Carica papaya HOM05D000528 ORTHO05D015583 2.4e-07 57.4 33 81.8
COL.COLO4_21179 Corchorus olitorius HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
Thhalv10002369m.g Eutrema salsugineum HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
Gohir.A07G018300 Gossypium hirsutum HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
Gohir.D07G018100 Gossypium hirsutum HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
Gorai.001G018700 Gossypium raimondii HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
MBI13_g05971_MAGBIO Magnolia biondii HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
Manes.03G054900 Manihot esculenta HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
Manes.16G088500 Manihot esculenta HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
PSO017G2681 Papaver somniferum HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
PSO170G1988 Papaver somniferum HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
PGR142G1496 Punica granatum HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
Sp5g17840 Schrenkiella parvula HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
Sc03g0004600 Simmondsia chinensis HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
THA.LOC104799601 Tarenaya hassleriana HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
THA.LOC104810976 Tarenaya hassleriana HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
Thecc.09G067600 Theobroma cacao HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
TAR626G1794 Trochodendron aralioides HOM05D000528 ORTHO05D000999 2.4e-07 57.4 33 81.8
Ah.01g016930 Amaranthus hybridus HOM05D000528 ORTHO05D000999 4.2e-07 56.6 33 81.8
EL10Ac9g21127 Beta vulgaris HOM05D000528 ORTHO05D000999 4.2e-07 56.6 33 81.8
ECA248G1999 Erigeron canadensis HOM05D000528 ORTHO05D000999 4.2e-07 56.6 33 78.8
Phvul.003G126000 Phaseolus vulgaris HOM05D000528 ORTHO05D000999 4.2e-07 56.6 33 81.8
VMungo1215G1674 Vigna mungo HOM05D000528 ORTHO05D000999 4.2e-07 56.6 33 81.8
AagrBONN_evm.TU.Sc2ySwM_117.395 Anthoceros agrestis HOM05D000528 ORTHO05D000999 7.1e-07 55.8 33 75.8
TWI63G0826 Tripterygium wilfordii HOM05D000528 ORTHO05D000999 7.1e-07 55.8 33 78.8
MSTRG.27425 Avicennia marina HOM05D000528 ORTHO05D000999 9.3e-07 55.5 32 81.2
unitig_699.g19739 Utricularia gibba HOM05D000528 ORTHO05D000999 9.3e-07 55.5 32 78.1
Pp3c5_6990 Physcomitrium patens HOM05D000528 ORTHO05D015583 1.2e-06 55.1 32 81.2
SMO347G0425 Selaginella moellendorffii HOM05D000528 ORTHO05D000999 1.2e-06 55.1 33 78.8
Zm00001eb107040 Zea mays HOM05D000528 ORTHO05D000999 1.6e-06 54.7 33 78.8
Zm00001eb324440 Zea mays HOM05D000528 ORTHO05D000999 1.6e-06 54.7 33 78.8
Hund00753 Selenicereus undatus HOM05D000528 ORTHO05D000999 2.1e-06 54.3 32 81.2
unitig_736.g22501 Utricularia gibba HOM05D000528 ORTHO05D000999 2.1e-06 54.3 32 71.9
Lsat_1_v5_gn_5_183521 Lactuca sativa HOM05D000528 ORTHO05D015583 2.7e-06 53.9 33 75.8
HPP92_012349 Vanilla planifolia HOM05D000528 ORTHO05D000999 2.7e-06 53.9 33 78.8
DCAR_023798 Daucus carota HOM05D000528 ORTHO05D000999 3.5e-06 53.5 33 75.8
Pp3c8_19790 Physcomitrium patens HOM05D000528 ORTHO05D000999 3.5e-06 53.5 33 78.8
Migut.F02072 Erythranthe guttata HOM05D000528 ORTHO05D000999 4.6e-06 53.1 33 72.7
Cre09.g390319 Chlamydomonas reinhardtii HOM05D000528 ORTHO05D000999 7.8e-06 52.4 33 66.7


User provided reference genes

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