Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c24_13710 Physcomitrium patens HOM05D003153 ORTHO05D003549 5.1e-90 334.3 163 100.0
Pp3c20_2830 Physcomitrium patens HOM05D003153 ORTHO05D003549 7.4e-49 197.6 160 56.9
Pp3c20_2850 Physcomitrium patens HOM05D003153 ORTHO05D003549 7.4e-49 197.6 160 56.9
AagrBONN_evm.TU.Sc2ySwM_362.594 Anthoceros agrestis HOM05D003153 ORTHO05D003549 7.0e-39 164.5 157 51.0
Mapoly0022s0127 Marchantia polymorpha HOM05D003153 ORTHO05D003549 7.7e-38 161.0 159 49.1
Atru.chr12.646 Acer truncatum HOM05D003153 ORTHO05D003549 2.7e-30 136.0 156 39.7
Atru.chr12.673 Acer truncatum HOM05D003153 ORTHO05D003549 2.7e-30 136.0 156 39.7
VMungo0720G0580 Vigna mungo HOM05D003153 ORTHO05D003549 3.5e-30 135.6 156 41.0
DCAR_015561 Daucus carota HOM05D003153 ORTHO05D003549 1.3e-29 133.7 156 38.5
DCAR_018836 Daucus carota HOM05D003153 ORTHO05D003549 1.7e-29 133.3 156 38.5
Sc15g0001660 Simmondsia chinensis HOM05D003153 ORTHO05D003549 1.7e-29 133.3 156 39.7
Solyc11g072450.2 Solanum lycopersicum HOM05D003153 ORTHO05D003549 3.8e-29 132.1 156 39.1
Sopen11g030090 Solanum pennellii HOM05D003153 ORTHO05D003549 3.8e-29 132.1 156 39.1
Glyma.20G177700 Glycine max HOM05D003153 ORTHO05D003549 8.6e-29 131.0 156 40.4
THA.LOC104823507 Tarenaya hassleriana HOM05D003153 ORTHO05D003549 8.6e-29 131.0 156 39.7
unitig_61.g26168 Utricularia gibba HOM05D003153 ORTHO05D003549 8.6e-29 131.0 156 38.5
Glyma.10G213400 Glycine max HOM05D003153 ORTHO05D003549 1.1e-28 130.6 156 40.4
PGSC0003DMG400027374 Solanum tuberosum HOM05D003153 ORTHO05D003549 1.1e-28 130.6 156 38.5
CAN.G553.14 Capsicum annuum HOM05D003153 ORTHO05D003549 1.5e-28 130.2 156 38.5
Ciclev10032923m.g Citrus clementina HOM05D003153 ORTHO05D003549 1.5e-28 130.2 156 38.5
FAN03G1468 Fragaria x ananassa HOM05D003153 ORTHO05D003549 1.9e-28 129.8 156 38.5
Phvul.007G092100 Phaseolus vulgaris HOM05D003153 ORTHO05D003549 2.5e-28 129.4 156 40.4
Lj5g0026554 Lotus japonicus HOM05D003153 ORTHO05D003549 3.3e-28 129.0 156 39.7
Manes.07G102500 Manihot esculenta HOM05D003153 ORTHO05D003549 3.3e-28 129.0 156 36.5
RcHm_v2.0_Chr1g0364071 Rosa chinensis HOM05D003153 ORTHO05D003549 3.3e-28 129.0 156 36.5
SGA_v2.0_scaffold2G00924 Striga asiatica HOM05D003153 ORTHO05D003549 3.3e-28 129.0 156 38.5
PSO384G3022 Papaver somniferum HOM05D003153 ORTHO05D003549 4.2e-28 128.6 156 37.2
SalBow3G0590 Salvia bowleyana HOM05D003153 ORTHO05D003549 4.2e-28 128.6 156 37.8
Migut.D02181 Erythranthe guttata HOM05D003153 ORTHO05D003549 5.5e-28 128.3 156 38.5
Migut.N02621 Erythranthe guttata HOM05D003153 ORTHO05D003549 5.5e-28 128.3 156 37.8
Nitab4.5_0002129g0130 Nicotiana tabacum HOM05D003153 ORTHO05D003549 5.5e-28 128.3 156 37.8
FvH4_7g20110 Fragaria vesca HOM05D003153 ORTHO05D003549 7.2e-28 127.9 156 37.2
PSO339G4741 Papaver somniferum HOM05D003153 ORTHO05D003549 7.2e-28 127.9 156 36.5
Peaxi162Scf00389g00810 Petunia axillaris HOM05D003153 ORTHO05D003549 7.2e-28 127.9 156 37.8
FAN06G2026 Fragaria x ananassa HOM05D003153 ORTHO05D003549 9.5e-28 127.5 156 37.2
Peaxi162Scf00123g01121 Petunia axillaris HOM05D003153 ORTHO05D003549 9.5e-28 127.5 156 37.8
Prupe.2G217900 Prunus persica HOM05D003153 ORTHO05D003549 9.5e-28 127.5 156 37.2
Lj1A184T44 Lonicera japonica HOM05D003153 ORTHO05D003549 1.2e-27 127.1 156 37.2
Lalb_Chr21g0305931 Lupinus albus HOM05D003153 ORTHO05D003549 1.2e-27 127.1 156 39.1
CSS0006958 Camellia sinensis var. sinensis HOM05D003153 ORTHO05D003549 1.6e-27 126.7 156 36.5
Thhalv10017326m.g Eutrema salsugineum HOM05D003153 ORTHO05D003549 1.6e-27 126.7 156 37.8
Lj2A1036T53 Lonicera japonica HOM05D003153 ORTHO05D003549 1.6e-27 126.7 156 36.5
Os08g0478200 Oryza sativa ssp. japonica HOM05D003153 ORTHO05D003549 1.6e-27 126.7 157 35.7
Sed0021432 Sechium edule HOM05D003153 ORTHO05D003549 1.6e-27 126.7 156 36.5
THA.LOC104803185 Tarenaya hassleriana HOM05D003153 ORTHO05D003549 1.6e-27 126.7 156 38.5
TWI63G1675 Tripterygium wilfordii HOM05D003153 ORTHO05D003549 1.6e-27 126.7 156 36.5
CSS0048017 Camellia sinensis var. sinensis HOM05D003153 ORTHO05D003549 2.1e-27 126.3 156 36.5
Dinv32792 Davidia involucrata HOM05D003153 ORTHO05D003549 2.1e-27 126.3 156 36.5
Lalb_Chr02g0141911 Lupinus albus HOM05D003153 ORTHO05D003549 2.1e-27 126.3 156 37.8
Actinidia07114 Actinidia chinensis HOM05D003153 ORTHO05D003549 2.8e-27 125.9 156 35.9
AL5G32930 Arabidopsis lyrata HOM05D003153 ORTHO05D003549 2.8e-27 125.9 156 38.5
Cc01_g11570 Coffea canephora HOM05D003153 ORTHO05D003549 2.8e-27 125.9 156 37.2
AT3G52300 Arabidopsis thaliana HOM05D003153 ORTHO05D003549 3.6e-27 125.6 156 38.5
MD01G1130700 Malus domestica HOM05D003153 ORTHO05D003549 3.6e-27 125.6 156 36.5
MD07G1178800 Malus domestica HOM05D003153 ORTHO05D003549 3.6e-27 125.6 156 36.5
Sabra10G0168500 Salix brachista HOM05D003153 ORTHO05D003549 3.6e-27 125.6 156 36.5
Thecc.10G068600 Theobroma cacao HOM05D003153 ORTHO05D003549 3.6e-27 125.6 156 36.5
TWI38G1590 Tripterygium wilfordii HOM05D003153 ORTHO05D003549 3.6e-27 125.6 156 37.2
CiPaw.01G276200 Carya illinoinensis HOM05D003153 ORTHO05D003549 4.7e-27 125.2 156 36.5
Lsat_1_v5_gn_1_50021 Lactuca sativa HOM05D003153 ORTHO05D003549 4.7e-27 125.2 156 37.8
Lsat_1_v5_gn_6_26321 Lactuca sativa HOM05D003153 ORTHO05D003549 4.7e-27 125.2 156 37.8
Nn2g10676 Nelumbo nucifera HOM05D003153 ORTHO05D003549 4.7e-27 125.2 156 36.5
Sp4g18080 Schrenkiella parvula HOM05D003153 ORTHO05D003549 4.7e-27 125.2 156 37.2
Sc06g0010600 Simmondsia chinensis HOM05D003153 ORTHO05D003549 4.7e-27 125.2 156 35.9
TPR.G1809 Trifolium pratense HOM05D003153 ORTHO05D003549 4.7e-27 125.2 156 37.8
TAR636G2783 Trochodendron aralioides HOM05D003153 ORTHO05D003549 4.7e-27 125.2 156 35.9
CAN.G224.11 Capsicum annuum HOM05D003153 ORTHO05D003549 6.1e-27 124.8 156 36.5
Dinv01414 Davidia involucrata HOM05D003153 ORTHO05D003549 6.1e-27 124.8 156 35.9
Dinv11804 Davidia involucrata HOM05D003153 ORTHO05D003549 6.1e-27 124.8 156 38.5
PGSC0003DMG400023247 Solanum tuberosum HOM05D003153 ORTHO05D003549 6.1e-27 124.8 156 37.2
TAR633G2137 Trochodendron aralioides HOM05D003153 ORTHO05D003549 6.1e-27 124.8 156 35.9
Aa31LG10G7410 Aethionema arabicum HOM05D003153 ORTHO05D003549 8.0e-27 124.4 156 37.8
MSTRG.18641 Avicennia marina HOM05D003153 ORTHO05D003549 8.0e-27 124.4 156 36.5
BcaB02g08579 Brassica carinata HOM05D003153 ORTHO05D003549 8.0e-27 124.4 156 37.2
CDE06G0464 Ceratophyllum demersum HOM05D003153 ORTHO05D003549 8.0e-27 124.4 151 37.7
Oeu012671.1 Olea europaea HOM05D003153 ORTHO05D003549 8.0e-27 124.4 156 37.2
Carub.0005s1866 Capsella rubella HOM05D003153 ORTHO05D003549 1.0e-26 124.0 156 37.8
Cfa001597 Carpinus fangiana HOM05D003153 ORTHO05D003549 1.0e-26 124.0 156 36.5
MELO3C012445.2 Cucumis melo HOM05D003153 ORTHO05D003549 1.0e-26 124.0 156 35.9
Thhalv10010770m.g Eutrema salsugineum HOM05D003153 ORTHO05D003549 1.0e-26 124.0 156 37.8
Nitab4.5_0007510g0010 Nicotiana tabacum HOM05D003153 ORTHO05D003549 1.0e-26 124.0 156 36.5
Potri.008G043800 Populus trichocarpa HOM05D003153 ORTHO05D003549 1.0e-26 124.0 156 35.9
PGR142G1973 Punica granatum HOM05D003153 ORTHO05D003549 1.0e-26 124.0 156 37.2
Actinidia03747 Actinidia chinensis HOM05D003153 ORTHO05D003549 1.4e-26 123.6 156 35.3
BraA04t16407Z Brassica rapa HOM05D003153 ORTHO05D003549 1.4e-26 123.6 156 37.8
Haze_16932 Corylus avellana HOM05D003153 ORTHO05D003549 1.4e-26 123.6 156 36.5
Eucgr.G02804 Eucalyptus grandis HOM05D003153 ORTHO05D003549 1.4e-26 123.6 156 36.5
Gohir.D01G117900 Gossypium hirsutum HOM05D003153 ORTHO05D003549 1.4e-26 123.6 156 35.3
HanXRQChr06g0164581 Helianthus annuus HOM05D003153 ORTHO05D003549 1.4e-26 123.6 156 37.2
Potri.010G217800 Populus trichocarpa HOM05D003153 ORTHO05D003549 1.4e-26 123.6 156 35.9
MSTRG.21145 Avicennia marina HOM05D003153 ORTHO05D003549 1.8e-26 123.2 156 35.3
C07p46910 Brassica napus HOM05D003153 ORTHO05D003549 1.8e-26 123.2 156 37.2
BolC7t45207H Brassica oleracea HOM05D003153 ORTHO05D003549 1.8e-26 123.2 156 37.2
Gohir.A01G133300 Gossypium hirsutum HOM05D003153 ORTHO05D003549 1.8e-26 123.2 156 35.3
Oeu036290.2 Olea europaea HOM05D003153 ORTHO05D003549 1.8e-26 123.2 156 35.9
Sp5g09960 Schrenkiella parvula HOM05D003153 ORTHO05D003549 1.8e-26 123.2 156 37.2
Ah.01g002740 Amaranthus hybridus HOM05D003153 ORTHO05D003549 2.3e-26 122.9 159 35.2
A03p48820 Brassica napus HOM05D003153 ORTHO05D003549 2.3e-26 122.9 156 37.2
A04p07100 Brassica napus HOM05D003153 ORTHO05D003549 2.3e-26 122.9 156 37.2
BraA03t13982Z Brassica rapa HOM05D003153 ORTHO05D003549 2.3e-26 122.9 156 37.2
HanXRQChr11g0351551 Helianthus annuus HOM05D003153 ORTHO05D003549 2.3e-26 122.9 156 36.5
MBI19_g11837_MAGBIO Magnolia biondii HOM05D003153 ORTHO05D003549 2.3e-26 122.9 157 35.0
BcaC02g09267 Brassica carinata HOM05D003153 ORTHO05D003549 3.0e-26 122.5 156 37.2
C04p40680 Brassica napus HOM05D003153 ORTHO05D003549 3.0e-26 122.5 156 37.2
BolC4t25651H Brassica oleracea HOM05D003153 ORTHO05D003549 3.0e-26 122.5 156 37.2
CsaV3_5G036470 Cucumis sativus L. HOM05D003153 ORTHO05D003549 3.0e-26 122.5 156 35.3
Medtr1g095830 Medicago truncatula HOM05D003153 ORTHO05D003549 3.0e-26 122.5 156 35.9
Sabra08G0030300 Salix brachista HOM05D003153 ORTHO05D003549 3.0e-26 122.5 156 35.3
HPP92_000637 Vanilla planifolia HOM05D003153 ORTHO05D003549 3.0e-26 122.5 160 33.8
Gorai.005G219300 Gossypium raimondii HOM05D003153 ORTHO05D003549 4.0e-26 122.1 156 35.3
Oeu017392.1 Olea europaea HOM05D003153 ORTHO05D003549 4.0e-26 122.1 156 35.3
Zm00001eb038370 Zea mays HOM05D003153 ORTHO05D003549 4.0e-26 122.1 157 36.3
BcaB01g00381 Brassica carinata HOM05D003153 ORTHO05D003549 5.2e-26 121.7 156 36.5
Gorai.001G229900 Gossypium raimondii HOM05D003153 ORTHO05D003549 5.2e-26 121.7 156 35.3
Gorai.012G094100 Gossypium raimondii HOM05D003153 ORTHO05D003549 5.2e-26 121.7 156 35.3
QL08p056772 Quercus lobata HOM05D003153 ORTHO05D003549 5.2e-26 121.7 156 35.3
arahy.Tifrunner.gnm1.ann1.GW1PTG Arachis hypogaea HOM05D003153 ORTHO05D003549 6.8e-26 121.3 158 36.1
CANSAT35G1164 Cannabis sativa HOM05D003153 ORTHO05D003549 6.8e-26 121.3 156 35.9
ClCG05G020840 Citrullus lanatus HOM05D003153 ORTHO05D003549 6.8e-26 121.3 156 34.6
Sed0013225 Sechium edule HOM05D003153 ORTHO05D003549 6.8e-26 121.3 156 34.6
BcaC07g39600 Brassica carinata HOM05D003153 ORTHO05D003549 8.9e-26 120.9 156 36.5
A09p45360 Brassica napus HOM05D003153 ORTHO05D003549 8.9e-26 120.9 156 36.5
C08p27540 Brassica napus HOM05D003153 ORTHO05D003549 8.9e-26 120.9 156 36.5
BolC8t50374H Brassica oleracea HOM05D003153 ORTHO05D003549 8.9e-26 120.9 156 36.5
BraA09t40000Z Brassica rapa HOM05D003153 ORTHO05D003549 8.9e-26 120.9 156 36.5
Duzib106G0636 Durio zibethinus HOM05D003153 ORTHO05D003549 8.9e-26 120.9 156 34.6
ATR1158G031 Amborella trichopoda HOM05D003153 ORTHO05D003549 1.2e-25 120.6 157 35.0
Aqoxy4G03206 Aquilegia oxysepala HOM05D003153 ORTHO05D003549 1.2e-25 120.6 156 36.5
Carub.0004s1758 Capsella rubella HOM05D003153 ORTHO05D003549 1.2e-25 120.6 156 37.2
Gorai.006G232900 Gossypium raimondii HOM05D003153 ORTHO05D003549 1.2e-25 120.6 156 35.3
CiPaw.02G176400 Carya illinoinensis HOM05D003153 ORTHO05D003549 1.5e-25 120.2 156 34.0
Duzib114G1009 Durio zibethinus HOM05D003153 ORTHO05D003549 1.5e-25 120.2 156 34.6
HanXRQChr13g0401541 Helianthus annuus HOM05D003153 ORTHO05D003549 1.5e-25 120.2 156 35.9
AUR62039719 Chenopodium quinoa HOM05D003153 ORTHO05D003549 2.0e-25 119.8 156 35.3
ECA248G0726 Erigeron canadensis HOM05D003153 ORTHO05D003549 2.0e-25 119.8 156 35.9
Gohir.D09G169900 Gossypium hirsutum HOM05D003153 ORTHO05D003549 2.6e-25 119.4 156 34.6
Gohir.D09G241600 Gossypium hirsutum HOM05D003153 ORTHO05D003549 2.6e-25 119.4 156 34.0
ATR0693G204 Amborella trichopoda HOM05D003153 ORTHO05D003549 3.4e-25 119.0 157 34.4
Gorai.002G143400 Gossypium raimondii HOM05D003153 ORTHO05D003549 3.4e-25 119.0 157 35.0
Hund08388 Selenicereus undatus HOM05D003153 ORTHO05D003549 3.4e-25 119.0 156 34.6
EL10Ac9g22446 Beta vulgaris HOM05D003153 ORTHO05D003549 4.4e-25 118.6 156 34.6
COL.COLO4_23730 Corchorus olitorius HOM05D003153 ORTHO05D003549 4.4e-25 118.6 156 37.2
Gorai.003G102200 Gossypium raimondii HOM05D003153 ORTHO05D003549 7.5e-25 117.9 156 35.3
Hund08389 Selenicereus undatus HOM05D003153 ORTHO05D003549 7.5e-25 117.9 156 34.6
Gohir.D01G038200 Gossypium hirsutum HOM05D003153 ORTHO05D003549 1.3e-24 117.1 154 35.7
Gohir.A05G345000 Gossypium hirsutum HOM05D003153 ORTHO05D003549 1.7e-24 116.7 156 33.3
Gohir.D11G323000 Gossypium hirsutum HOM05D003153 ORTHO05D003549 4.9e-24 115.2 152 34.9
Gohir.D11G308400 Gossypium hirsutum HOM05D003153 ORTHO05D003549 6.3e-24 114.8 156 34.0
Ah.01g014920 Amaranthus hybridus HOM05D003153 ORTHO05D003549 8.3e-24 114.4 159 34.6
Ca_10590_v3 Cicer arietinum L. HOM05D003153 ORTHO05D003549 1.1e-23 114.0 195 31.3
PSO063G2342 Papaver somniferum HOM05D003153 ORTHO05D003549 1.1e-23 114.0 153 33.3
SEGI_02420 Sequoiadendron giganteum HOM05D003153 ORTHO05D003549 1.1e-23 114.0 160 35.0
FAN01G2885 Fragaria x ananassa HOM05D003153 ORTHO05D003549 3.2e-23 112.5 193 31.6
vmacro14467 Vaccinium macrocarpon HOM05D003153 ORTHO05D003549 3.2e-23 112.5 184 32.1
CDE12G0268 Ceratophyllum demersum HOM05D003153 ORTHO05D003549 5.4e-23 111.7 151 36.4
Manes.10G043000 Manihot esculenta HOM05D003153 ORTHO05D003549 1.6e-22 110.2 156 32.7
GSVIVG01016324001 Vitis vinifera HOM05D003153 ORTHO05D003549 1.6e-22 110.2 144 35.4
AUR62036269 Chenopodium quinoa HOM05D003153 ORTHO05D003549 6.6e-21 104.8 184 29.9
vmacro03171 Vaccinium macrocarpon HOM05D003153 ORTHO05D003549 6.6e-21 104.8 146 32.2
arahy.Tifrunner.gnm1.ann1.8WS310 Arachis hypogaea HOM05D003153 ORTHO05D003549 8.6e-21 104.4 199 28.6
arahy.Tifrunner.gnm1.ann1.SR33X7 Arachis hypogaea HOM05D003153 ORTHO05D003549 1.9e-20 103.2 158 32.9
FAN10G0601 Fragaria x ananassa HOM05D003153 ORTHO05D003549 1.2e-19 100.5 198 29.8
Actinidia24078 Actinidia chinensis HOM05D003153 ORTHO05D003549 3.1e-18 95.9 117 36.8
Sopen06g001020 Solanum pennellii HOM05D003153 ORTHO05D003549 4.0e-18 95.5 202 27.2
Psat6g185760 Pisum sativum HOM05D003153 ORTHO05D003549 3.4e-17 92.4 157 30.6
Nn2g13006 Nelumbo nucifera HOM05D003153 ORTHO05D003549 1.7e-16 90.1 125 33.6
RcHm_v2.0_Chr4g0444761 Rosa chinensis HOM05D003153 ORTHO05D003549 8.3e-16 87.8 162 30.2
Nitab4.5_0000022g0160 Nicotiana tabacum HOM05D003153 ORTHO05D003549 3.2e-15 85.9 124 33.1
Rhsim13G0092300 Rhododendron simsii HOM05D003153 ORTHO05D003549 3.2e-15 85.9 210 25.7
unitig_0.g1036 Utricularia gibba HOM05D003153 ORTHO05D003549 7.0e-15 84.7 133 31.6
HPP92_000639 Vanilla planifolia HOM05D003153 ORTHO05D003549 2.3e-13 79.7 163 26.4
Gorai.003G100000 Gossypium raimondii HOM05D003153 ORTHO05D003549 2.1e-11 73.2 152 28.9
SMO201G0176 Selaginella moellendorffii HOM05D003153 ORTHO05D003549 4.7e-11 72.0 154 29.2
MCO11G914 Micromonas commoda HOM05D003153 ORTHO05D003549 8.9e-10 67.8 149 26.2
Ciclev10029900m.g Citrus clementina HOM05D003153 ORTHO05D003549 1.5e-09 67.0 134 27.6
CARHR162070 Cardamine hirsuta HOM05D003153 ORTHO05D003549 3.4e-09 65.9 73 37.0
Cpa.g.sc60.52 Carica papaya HOM05D003153 ORTHO05D003549 4.4e-09 65.5 69 34.8
Gohir.D04G083333 Gossypium hirsutum HOM05D003153 ORTHO05D003549 9.8e-09 64.3 69 34.8
Gorai.012G102600 Gossypium raimondii HOM05D003153 ORTHO05D003549 2.4e-07 59.7 64 35.9
Aqoxy461s001 Aquilegia oxysepala HOM05D003153 ORTHO05D003549 5.4e-07 58.5 103 29.1
SEGI_17657 Sequoiadendron giganteum HOM05D003153 ORTHO05D003549 7.8e-06 54.7 61 39.3
SEGI_23488 Sequoiadendron giganteum HOM05D003153 ORTHO05D003549 7.8e-06 54.7 61 39.3


User provided reference genes

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