Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_9790 Physcomitrium patens HOM05D019950 ORTHO05D002029 3.7e-141 505.0 276 100.0
Pp3c2_38120 Physcomitrium patens HOM05D019950 ORTHO05D002029 4.3e-113 411.8 283 83.7
Pp3c7_13780 Physcomitrium patens HOM05D019950 ORTHO05D002029 1.8e-34 150.6 293 43.7
Mapoly0176s0005 Marchantia polymorpha HOM05D019950 ORTHO05D002029 3.1e-31 139.8 330 38.5
AagrBONN_evm.TU.Sc2ySwM_117.2698 Anthoceros agrestis HOM05D019950 ORTHO05D002029 6.5e-13 79.0 214 35.0
Dinv25215 Davidia involucrata HOM05D002068 ORTHO05D002029 4.2e-12 76.3 180 37.8
TAR375G0554 Trochodendron aralioides HOM05D002068 ORTHO05D002029 2.1e-11 73.9 221 33.0
vmacro00330 Vaccinium macrocarpon HOM05D002068 ORTHO05D002029 3.6e-11 73.2 264 33.0
ATR0665G256 Amborella trichopoda HOM05D002068 ORTHO05D002029 2.3e-10 70.5 223 36.3
Potri.001G142400 Populus trichocarpa HOM05D002068 ORTHO05D002029 6.8e-10 68.9 198 35.9
Actinidia03376 Actinidia chinensis HOM05D002068 ORTHO05D002029 1.2e-09 68.2 210 30.5
Sc01g0007430 Simmondsia chinensis HOM05D002068 ORTHO05D002029 1.2e-09 68.2 174 37.9
CSS0037727 Camellia sinensis var. sinensis HOM05D002068 ORTHO05D002029 2.0e-09 67.4 178 37.6
CSS0039799 Camellia sinensis var. sinensis HOM05D002068 ORTHO05D002029 2.0e-09 67.4 178 37.6
Ca_06078_v3 Cicer arietinum L. HOM05D002068 ORTHO05D002029 7.5e-09 65.5 226 31.0
CiPaw.12G063800 Carya illinoinensis HOM05D002068 ORTHO05D002029 1.3e-08 64.7 214 35.0
Thhalv10016759m.g Eutrema salsugineum HOM05D002068 ORTHO05D002029 1.3e-08 64.7 153 34.0
Prupe.5G036600 Prunus persica HOM05D002068 ORTHO05D002029 1.3e-08 64.7 215 31.6
CDE03G0421 Ceratophyllum demersum HOM05D002068 ORTHO05D002029 1.7e-08 64.3 179 36.9
MD14G1120900 Malus domestica HOM05D002068 ORTHO05D002029 1.7e-08 64.3 216 30.6
QL12p005199 Quercus lobata HOM05D002068 ORTHO05D002029 1.7e-08 64.3 178 36.0
unitig_22.g5497 Utricularia gibba HOM05D000381 ORTHO05D002029 2.2e-08 63.9 197 33.0
Sp4g17450 Schrenkiella parvula HOM05D002068 ORTHO05D002029 2.8e-08 63.5 152 33.6
THA.LOC104814442 Tarenaya hassleriana HOM05D002068 ORTHO05D002029 2.8e-08 63.5 204 32.8
Migut.E00932 Erythranthe guttata HOM05D002068 ORTHO05D002029 3.7e-08 63.2 220 34.1
Cfa012439 Carpinus fangiana HOM05D002068 ORTHO05D002029 4.8e-08 62.8 214 34.6
Sabra01G0111200 Salix brachista HOM05D002068 ORTHO05D002029 6.3e-08 62.4 178 35.4
AL4G31260 Arabidopsis lyrata HOM05D002068 ORTHO05D002029 8.3e-08 62.0 152 32.9
AT2G35230 Arabidopsis thaliana HOM05D002068 ORTHO05D002029 8.3e-08 62.0 161 32.9
CSS0014279 Camellia sinensis var. sinensis HOM05D002068 ORTHO05D002029 8.3e-08 62.0 230 31.3
Nitab4.5_0004604g0010 Nicotiana tabacum HOM05D002068 ORTHO05D002029 1.1e-07 61.6 218 31.7
Ah.12g055030 Amaranthus hybridus HOM05D002068 ORTHO05D002029 1.4e-07 61.2 160 37.5
CiPaw.11G093300 Carya illinoinensis HOM05D002068 ORTHO05D002029 1.4e-07 61.2 219 34.7
BcaC02g11626 Brassica carinata HOM05D002068 ORTHO05D002029 1.8e-07 60.8 157 33.1
C04p12950 Brassica napus HOM05D002068 ORTHO05D002029 1.8e-07 60.8 157 33.1
BolC4t22938H Brassica oleracea HOM05D002068 ORTHO05D002029 1.8e-07 60.8 157 33.1
A04p26780 Brassica napus HOM05D002068 ORTHO05D002029 2.4e-07 60.5 150 34.7
Haze_08229 Corylus avellana HOM05D002068 ORTHO05D002029 2.4e-07 60.5 223 34.5
SMO118G0018 Selaginella moellendorffii HOM05D019950 ORTHO05D002029 2.4e-07 60.5 374 27.8
PGSC0003DMG400002107 Solanum tuberosum HOM05D002068 ORTHO05D002029 2.4e-07 60.5 150 34.7
Dinv28957 Davidia involucrata HOM05D002068 ORTHO05D002029 4.1e-07 59.7 175 34.9
Lj8C300T9 Lonicera japonica HOM05D002068 ORTHO05D002029 4.1e-07 59.7 180 33.9
unitig_8.g3918 Utricularia gibba HOM05D002068 ORTHO05D002029 4.1e-07 59.7 177 34.5
Peaxi162Scf00460g00033 Petunia axillaris HOM05D002068 ORTHO05D002029 5.4e-07 59.3 220 34.1
A05p10530 Brassica napus HOM05D002068 ORTHO05D002029 7.0e-07 58.9 181 31.5
Aqoxy3G02351 Aquilegia oxysepala HOM05D002068 ORTHO05D002029 9.1e-07 58.5 142 33.8
BraA05t19991Z Brassica rapa HOM05D002068 ORTHO05D002029 1.2e-06 58.2 181 31.5
ATR1133G059 Amborella trichopoda HOM05D002068 ORTHO05D002029 1.6e-06 57.8 174 31.6
CANSAT21G2072 Cannabis sativa HOM05D002068 ORTHO05D002029 1.6e-06 57.8 145 38.6
Nitab4.5_0000256g0320 Nicotiana tabacum HOM05D002068 ORTHO05D002029 1.6e-06 57.8 183 33.3
Sopen06g021390 Solanum pennellii HOM05D002068 ORTHO05D002029 2.7e-06 57.0 152 34.9
TWI60G1070 Tripterygium wilfordii HOM05D002068 ORTHO05D002029 2.7e-06 57.0 219 30.1
VMungo1215G2655 Vigna mungo HOM05D002068 ORTHO05D002029 2.7e-06 57.0 176 35.2
C04p64180 Brassica napus HOM05D002068 ORTHO05D002029 3.5e-06 56.6 152 34.9
BolC4t27901H Brassica oleracea HOM05D002068 ORTHO05D002029 5.9e-06 55.8 178 32.6
DCAR_008272 Daucus carota HOM05D002068 ORTHO05D002029 5.9e-06 55.8 172 34.3
FvH4_4g21960 Fragaria vesca HOM05D002068 ORTHO05D002029 7.7e-06 55.5 162 35.2
THA.LOC104806709 Tarenaya hassleriana HOM05D002068 ORTHO05D002029 7.7e-06 55.5 184 31.5


User provided reference genes

Program Settings