Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c19_17160 Physcomitrium patens HOM05D004432 ORTHO05D005427 1.7e-103 379.8 269 100.0
Pp3c22_1400 Physcomitrium patens HOM05D004432 ORTHO05D005427 1.4e-47 194.1 176 71.0
Mapoly0070s0095 Marchantia polymorpha HOM05D004432 ORTHO05D005427 5.7e-30 135.6 145 55.9
RcHm_v2.0_Chr5g0021051 Rosa chinensis HOM05D004432 ORTHO05D005427 2.8e-29 133.3 142 58.5
Glyma.05G241800 Glycine max HOM05D004432 ORTHO05D005427 3.7e-29 132.9 147 53.1
MD10G1227600 Malus domestica HOM05D004432 ORTHO05D005427 6.3e-29 132.1 84 76.2
CiPaw.09G137600 Carya illinoinensis HOM05D004432 ORTHO05D005427 1.8e-28 130.6 147 52.4
FAN21G3105 Fragaria x ananassa HOM05D004432 ORTHO05D005427 1.8e-28 130.6 141 58.2
FvH4_3g12940 Fragaria vesca HOM05D004432 ORTHO05D005427 2.4e-28 130.2 141 58.2
VMungo0251G3730 Vigna mungo HOM05D004432 ORTHO05D005427 2.4e-28 130.2 147 52.4
Prupe.4G117400 Prunus persica HOM05D004432 ORTHO05D005427 3.1e-28 129.8 84 76.2
FAN25G3492 Fragaria x ananassa HOM05D004432 ORTHO05D005427 4.1e-28 129.4 141 57.4
SEGI_09071 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 4.1e-28 129.4 85 76.5
Dinv05655 Davidia involucrata HOM05D004432 ORTHO05D005427 5.4e-28 129.0 84 76.2
COL.COLO4_18029 Corchorus olitorius HOM05D004432 ORTHO05D003521 7.0e-28 128.6 130 54.6
FAN16G2829 Fragaria x ananassa HOM05D004432 ORTHO05D005427 7.0e-28 128.6 141 57.4
HanXRQChr09g0257831 Helianthus annuus HOM05D004432 ORTHO05D005427 9.2e-28 128.3 84 76.2
MBI18_g00544_MAGBIO Magnolia biondii HOM05D004432 ORTHO05D005427 9.2e-28 128.3 142 55.6
Dinv31191 Davidia involucrata HOM05D004432 ORTHO05D005427 1.2e-27 127.9 84 76.2
Manes.03G075400 Manihot esculenta HOM05D004432 ORTHO05D005427 1.2e-27 127.9 140 52.9
Sabra01G0131600 Salix brachista HOM05D004432 ORTHO05D005427 1.6e-27 127.5 140 56.4
Thecc.02G004200 Theobroma cacao HOM05D004432 ORTHO05D005427 1.6e-27 127.5 84 75.0
MD05G1247000 Malus domestica HOM05D004432 ORTHO05D005427 2.7e-27 126.7 140 52.9
GSVIVG01012145001 Vitis vinifera HOM05D004432 ORTHO05D005427 3.5e-27 126.3 84 75.0
ATR0568G227 Amborella trichopoda HOM05D004432 ORTHO05D005427 4.5e-27 125.9 85 74.1
ECA232G3357 Erigeron canadensis HOM05D004432 ORTHO05D005427 5.9e-27 125.6 138 56.5
CANSAT35G1493 Cannabis sativa HOM05D004432 ORTHO05D005427 1.7e-26 124.0 84 73.8
Gohir.A12G049500 Gossypium hirsutum HOM05D004432 ORTHO05D005427 2.3e-26 123.6 84 72.6
Gohir.D12G047900 Gossypium hirsutum HOM05D004432 ORTHO05D005427 2.3e-26 123.6 84 72.6
Sabra03G0044900 Salix brachista HOM05D004432 ORTHO05D005427 2.3e-26 123.6 140 53.6
Lalb_Chr05g0222011 Lupinus albus HOM05D004432 ORTHO05D005427 2.9e-26 123.2 127 56.7
PGR042G3514 Punica granatum HOM05D004432 ORTHO05D005427 2.9e-26 123.2 162 49.4
Hma1.2p1_0088F.1_g045180 Hydrangea macrophylla HOM05D004432 ORTHO05D005427 3.8e-26 122.9 137 55.5
Migut.M02008 Erythranthe guttata HOM05D004432 ORTHO05D005427 5.0e-26 122.5 137 52.6
CSS0030674 Camellia sinensis var. sinensis HOM05D004432 ORTHO05D005427 6.6e-26 122.1 137 52.6
Eucgr.E04313 Eucalyptus grandis HOM05D004432 ORTHO05D005427 6.6e-26 122.1 143 53.1
SGA_v2.0_scaffold175G39329 Striga asiatica HOM05D004432 ORTHO05D005427 8.6e-26 121.7 84 72.6
Rhsim13G0133800 Rhododendron simsii HOM05D004432 ORTHO05D005427 1.1e-25 121.3 84 73.8
RhsimUnG0176800 Rhododendron simsii HOM05D004432 ORTHO05D005427 1.1e-25 121.3 84 73.8
vmacro03556 Vaccinium macrocarpon HOM05D004432 ORTHO05D005427 1.1e-25 121.3 84 73.8
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 1.5e-25 120.9 84 70.2
Phvul.002G325100 Phaseolus vulgaris HOM05D004432 ORTHO05D005427 2.5e-25 120.2 145 51.7
SGA_v2.0_scaffold298G47706 Striga asiatica HOM05D004432 ORTHO05D005427 3.3e-25 119.8 136 54.4
PSO541G2602 Papaver somniferum HOM05D004432 ORTHO05D005427 4.3e-25 119.4 142 53.5
EL10Ac6g15345 Beta vulgaris HOM05D004432 ORTHO05D005427 5.6e-25 119.0 138 51.4
Peaxi162Scf00198g01525 Petunia axillaris HOM05D004432 ORTHO05D005427 7.3e-25 118.6 140 52.1
Sed0004537 Sechium edule HOM05D004432 ORTHO05D005427 7.3e-25 118.6 151 50.3
PGSC0003DMG401017733 Solanum tuberosum HOM05D004432 ORTHO05D005427 7.3e-25 118.6 147 51.0
TWI32G0924 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 7.3e-25 118.6 136 54.4
GSVIVG01015880001 Vitis vinifera HOM05D004432 ORTHO05D005427 9.5e-25 118.2 84 71.4
CsaV3_6G052770 Cucumis sativus L. HOM05D004432 ORTHO05D005427 1.2e-24 117.9 142 51.4
Atru.chr10.352 Acer truncatum HOM05D004432 ORTHO05D005427 1.6e-24 117.5 143 51.7
SEGI_00495 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 1.6e-24 117.5 103 64.1
TWI15G0381 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 1.6e-24 117.5 118 55.1
Dinv23013 Davidia involucrata HOM05D004432 ORTHO05D005427 2.1e-24 117.1 84 69.0
Solyc02g081620.3 Solanum lycopersicum HOM05D004432 ORTHO05D005427 3.6e-24 116.3 140 52.9
TPR.G12851 Trifolium pratense HOM05D004432 ORTHO05D005427 6.1e-24 115.5 254 50.0
BcaB07g32757 Brassica carinata HOM05D004432 ORTHO05D005427 1.4e-23 114.4 131 52.7
Sopen02g010370 Solanum pennellii HOM05D004432 ORTHO05D005427 1.4e-23 114.4 138 51.4
TWI63G0296 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 1.4e-23 114.4 137 53.3
CAN.G809.71 Capsicum annuum HOM05D004432 ORTHO05D005427 3.0e-23 113.2 150 50.7
AagrBONN_evm.TU.Sc2ySwM_344.4234 Anthoceros agrestis HOM05D004432 ORTHO05D005427 4.0e-23 112.8 143 51.0
BraA09t39051Z Brassica rapa HOM05D004432 ORTHO05D005427 5.2e-23 112.5 84 67.9
Duzib248G0466 Durio zibethinus HOM05D004432 ORTHO05D005427 5.2e-23 112.5 110 57.3
Lj1A1149G74 Lonicera japonica HOM05D004432 ORTHO05D005427 8.9e-23 111.7 110 57.3
CSS0046356 Camellia sinensis var. sinensis HOM05D004432 ORTHO05D005427 1.2e-22 111.3 168 45.2
BcaC05g27130 Brassica carinata HOM05D004432 ORTHO05D005427 1.5e-22 110.9 126 54.0
C05p30150 Brassica napus HOM05D004432 ORTHO05D005427 1.5e-22 110.9 126 54.0
BolC5t31752H Brassica oleracea HOM05D004432 ORTHO05D005427 1.5e-22 110.9 126 54.0
Lsat_1_v5_gn_8_106840 Lactuca sativa HOM05D004432 ORTHO05D005427 1.5e-22 110.9 131 53.4
SalBow8G1652 Salvia bowleyana HOM05D004432 ORTHO05D005427 1.5e-22 110.9 274 40.1
Solyc02g032120.3 Solanum lycopersicum HOM05D004432 ORTHO05D005427 1.5e-22 110.9 138 50.7
TWI15G1036 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 2.0e-22 110.5 137 51.8
AT1G30970 Arabidopsis thaliana HOM05D004432 ORTHO05D005427 3.4e-22 109.8 141 50.4
Lalb_Chr10g0095541 Lupinus albus HOM05D004432 ORTHO05D005427 3.4e-22 109.8 148 49.3
Peaxi162Scf00048g01413 Petunia axillaris HOM05D004432 ORTHO05D005427 3.4e-22 109.8 256 46.9
unitig_748.g7489 Utricularia gibba HOM05D004432 ORTHO05D005427 4.4e-22 109.4 261 39.1
Carub.0001s2938 Capsella rubella HOM05D004432 ORTHO05D005427 5.7e-22 109.0 143 51.7
BcaB04g18194 Brassica carinata HOM05D004432 ORTHO05D005427 1.7e-21 107.5 126 52.4
TAR624G0396 Trochodendron aralioides HOM05D004432 ORTHO05D005427 1.7e-21 107.5 142 50.0
Thhalv10008022m.g Eutrema salsugineum HOM05D004432 ORTHO05D005427 8.3e-21 105.1 141 49.6
BcaC07g37789 Brassica carinata HOM05D004432 ORTHO05D005427 1.4e-20 104.4 146 49.3
Hund04373 Selenicereus undatus HOM05D004432 ORTHO05D005427 1.4e-20 104.4 124 50.0
AUR62017849 Chenopodium quinoa HOM05D004432 ORTHO05D005427 1.8e-20 104.0 177 40.7
TWI34G0639 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 9.2e-20 101.7 147 46.9
ClCG01G025530 Citrullus lanatus HOM05D004432 ORTHO05D005427 4.6e-19 99.4 190 40.0
Lj4g0008002 Lotus japonicus HOM05D004432 ORTHO05D005427 4.6e-19 99.4 127 48.8
Oeu056059.4 Olea europaea HOM05D004432 ORTHO05D005427 5.9e-19 99.0 174 42.5
SMO239G0124 Selaginella moellendorffii HOM05D004432 ORTHO05D005427 1.0e-18 98.2 67 76.1
arahy.Tifrunner.gnm1.ann1.AGE02H Arachis hypogaea HOM05D004432 ORTHO05D005427 1.7e-18 97.4 121 49.6
Os09g0560900 Oryza sativa ssp. japonica HOM05D004432 ORTHO05D005427 1.7e-18 97.4 65 73.8
HPP92_006155 Vanilla planifolia HOM05D004432 ORTHO05D005427 3.0e-18 96.7 128 47.7
Glyma.08G049300 Glycine max HOM05D004432 ORTHO05D005427 6.6e-18 95.5 133 46.6
arahy.Tifrunner.gnm1.ann1.GLQ3B3 Arachis hypogaea HOM05D004432 ORTHO05D005427 8.6e-18 95.1 121 48.8
FAN11G2748 Fragaria x ananassa HOM05D004432 ORTHO05D005427 1.5e-17 94.4 121 52.1
Medtr8g106220 Medicago truncatula HOM05D004432 ORTHO05D005427 1.5e-17 94.4 126 46.8
Haze_05275 Corylus avellana HOM05D004432 ORTHO05D005427 4.3e-17 92.8 124 50.0
Nn7g38330 Nelumbo nucifera HOM05D004432 ORTHO05D005427 5.6e-17 92.4 121 47.9
CiPaw.10G104800 Carya illinoinensis HOM05D004432 ORTHO05D005427 9.5e-17 91.7 139 43.9
Ca_17239_v3 Cicer arietinum L. HOM05D004432 ORTHO05D005427 9.5e-17 91.7 133 44.4
Lalb_Chr09g0330711 Lupinus albus HOM05D004432 ORTHO05D005427 1.2e-16 91.3 126 48.4
Potri.001G160700 Populus trichocarpa HOM05D004432 ORTHO05D005427 1.6e-16 90.9 107 51.4
Cpa.g.sc30.114 Carica papaya HOM05D004432 ORTHO05D005427 2.1e-16 90.5 63 69.8
Oeu018409.2 Olea europaea HOM05D004432 ORTHO05D005427 2.1e-16 90.5 194 38.1
Actinidia22430 Actinidia chinensis HOM05D004432 ORTHO05D005427 2.8e-16 90.1 63 71.4
THA.LOC104798567 Tarenaya hassleriana HOM05D004432 ORTHO05D005427 2.8e-16 90.1 123 48.8
Cfa001128 Carpinus fangiana HOM05D004432 ORTHO05D005427 3.6e-16 89.7 125 44.8
HPP92_024334 Vanilla planifolia HOM05D004432 ORTHO05D005427 3.6e-16 89.7 121 47.9
Psat7g005440 Pisum sativum HOM05D004432 ORTHO05D005427 4.7e-16 89.4 127 44.9
Actinidia33704 Actinidia chinensis HOM05D004432 ORTHO05D005427 6.2e-16 89.0 63 69.8
Aqoxy1G01396 Aquilegia oxysepala HOM05D004432 ORTHO05D005427 1.1e-15 88.2 114 50.9
PSO675G3183 Papaver somniferum HOM05D004432 ORTHO05D005427 1.1e-15 88.2 121 49.6
MSTRG.16369 Avicennia marina HOM05D004432 ORTHO05D005427 3.1e-15 86.7 115 47.8
AUR62003535 Chenopodium quinoa HOM05D004432 ORTHO05D005427 6.8e-15 85.5 117 46.2
Nitab4.5_0006794g0040 Nicotiana tabacum HOM05D004432 ORTHO05D005427 6.8e-15 85.5 124 46.8
Atru.chr8.662 Acer truncatum HOM05D004432 ORTHO05D005427 8.9e-15 85.1 120 47.5
Sc16g0004480 Simmondsia chinensis HOM05D004432 ORTHO05D005427 1.2e-14 84.7 124 47.6
A09p35240 Brassica napus HOM05D004432 ORTHO05D005427 1.5e-14 84.3 64 67.2
Sp1g26830 Schrenkiella parvula HOM05D004432 ORTHO05D005427 1.5e-14 84.3 121 49.6
Sopen02g026240 Solanum pennellii HOM05D004432 ORTHO05D005427 2.0e-14 84.0 119 47.9
Gorai.008G050900 Gossypium raimondii HOM05D004432 ORTHO05D005427 2.6e-14 83.6 61 65.6
MELO3C007033.2 Cucumis melo HOM05D004432 ORTHO05D005427 4.4e-14 82.8 121 45.5
Nitab4.5_0010401g0010 Nicotiana tabacum HOM05D004432 ORTHO05D005427 4.4e-14 82.8 115 47.8
BraA08t33081Z Brassica rapa HOM05D004432 ORTHO05D005427 5.8e-14 82.4 123 47.2
Duzib132G0752 Durio zibethinus HOM05D004432 ORTHO05D005427 5.8e-14 82.4 108 48.1
Atru.chr10.360 Acer truncatum HOM05D004432 ORTHO05D005427 4.1e-12 76.3 78 55.1
A08p10850 Brassica napus HOM05D004432 ORTHO05D005427 4.1e-12 76.3 126 45.2
BolC8t48181H Brassica oleracea HOM05D004432 ORTHO05D005427 4.1e-12 76.3 126 46.0
CARHR030510 Cardamine hirsuta HOM05D004432 ORTHO05D005427 9.2e-12 75.1 114 49.1
SHI20754 Sapria himalayana HOM05D000030 ORTHO05D000009 9.2e-12 75.1 73 54.8
DCAR_003760 Daucus carota HOM05D004432 ORTHO05D005427 2.7e-11 73.6 248 35.9
Cc09_g05240 Coffea canephora HOM05D004432 ORTHO05D005427 1.0e-10 71.6 233 33.5
Ciclev10015448m.g Citrus clementina HOM05D004432 ORTHO05D005427 3.3e-09 66.6 235 31.1
Aa31LG6G12370 Aethionema arabicum HOM05D004432 ORTHO05D005427 5.6e-09 65.9 246 33.3
AL1G45380 Arabidopsis lyrata HOM05D004432 ORTHO05D005427 9.5e-09 65.1 240 34.2
Zm00001eb104750 Zea mays HOM05D004432 ORTHO05D005427 1.8e-07 60.8 122 39.3
Ah.03g147620 Amaranthus hybridus HOM05D004432 ORTHO05D005427 2.6e-06 57.0 104 40.4


User provided reference genes

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