Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 2.4e-245 851.7 412 100.0
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 1.3e-187 659.8 412 77.2
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 1.2e-116 424.1 386 53.9
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 1.6e-95 354.0 414 46.6
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 6.8e-91 338.6 355 45.9
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 9.9e-82 308.1 379 42.5
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 2.2e-81 307.0 368 43.8
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 1.9e-80 303.9 405 41.5
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 3.2e-80 303.1 371 43.9
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 3.2e-80 303.1 371 43.9
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 5.4e-80 302.4 373 43.4
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 7.1e-80 302.0 375 43.2
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 2.1e-79 300.4 354 44.6
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 2.7e-79 300.1 402 40.8
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 1.0e-78 298.1 364 43.1
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 1.0e-78 298.1 405 40.5
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 1.3e-78 297.7 371 42.6
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 1.3e-78 297.7 382 42.9
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 3.9e-78 296.2 373 41.3
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 5.1e-78 295.8 406 39.4
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 6.6e-78 295.4 405 39.3
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.1e-77 294.7 405 39.0
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 1.1e-77 294.7 404 40.8
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 1.9e-77 293.9 384 40.1
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 2.5e-77 293.5 402 40.8
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 2.5e-77 293.5 388 41.8
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 3.3e-77 293.1 371 41.5
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 3.3e-77 293.1 377 41.9
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 4.3e-77 292.7 398 41.5
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 5.6e-77 292.4 377 42.2
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 5.6e-77 292.4 406 41.6
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 5.6e-77 292.4 404 40.3
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 5.6e-77 292.4 415 41.9
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 7.3e-77 292.0 386 39.9
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 7.3e-77 292.0 404 40.6
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 9.6e-77 291.6 349 43.0
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 1.3e-76 291.2 402 40.5
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 1.3e-76 291.2 404 40.3
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 1.3e-76 291.2 374 42.2
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 1.3e-76 291.2 402 42.0
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 2.8e-76 290.0 386 39.6
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 2.8e-76 290.0 343 43.4
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 2.8e-76 290.0 366 41.8
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 3.6e-76 289.7 386 39.6
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 4.8e-76 289.3 404 38.1
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 4.8e-76 289.3 404 38.1
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.4e-75 287.7 407 39.1
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 1.4e-75 287.7 377 41.6
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 1.4e-75 287.7 404 38.4
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 1.8e-75 287.3 401 40.4
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 1.8e-75 287.3 382 41.4
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 1.8e-75 287.3 381 40.7
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 4.0e-75 286.2 385 40.0
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 5.3e-75 285.8 365 41.6
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 6.9e-75 285.4 362 42.8
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 9.0e-75 285.0 384 40.9
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 9.0e-75 285.0 400 41.5
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 1.2e-74 284.6 404 39.1
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 1.5e-74 284.3 405 37.8
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 2.0e-74 283.9 401 40.4
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 5.8e-74 282.3 354 41.5
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 7.6e-74 282.0 367 43.1
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 7.6e-74 282.0 350 42.6
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 1.3e-73 281.2 404 39.1
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 1.3e-73 281.2 373 40.2
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 2.9e-73 280.0 429 37.1
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 3.8e-73 279.6 414 37.7
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.1e-72 278.1 415 39.3
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.4e-72 277.7 408 40.7
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 5.4e-72 275.8 353 40.2
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 5.4e-72 275.8 431 38.1
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 1.3e-70 271.2 406 37.7
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 3.0e-70 270.0 344 41.6
Pp3c26_9360 Physcomitrium patens HOM05D006805 ORTHO05D008656 3.0e-70 270.0 139 92.1
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 5.1e-70 269.2 428 37.9
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 8.7e-70 268.5 385 39.5
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 2.5e-69 266.9 411 36.7
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 3.3e-69 266.5 335 40.6
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 2.1e-68 263.8 381 38.6
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 1.1e-67 261.5 374 39.8
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 2.0e-66 257.3 444 35.1
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 3.4e-66 256.5 396 37.1
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 2.9e-65 253.4 358 37.4
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 1.1e-64 251.5 332 39.8
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 9.3e-64 248.4 409 35.7
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 1.3e-62 244.6 310 41.9
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 6.7e-62 242.3 409 36.7
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 4.3e-61 239.6 403 37.0
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 7.4e-61 238.8 312 42.3
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.3e-60 238.0 425 35.8
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.1e-59 235.0 335 38.8
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 1.8e-54 217.6 210 45.2
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.8e-54 217.6 294 41.8
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 1.8e-54 217.6 242 43.0
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 2.8e-52 210.3 363 36.1
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 3.1e-51 206.8 409 32.8
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 3.4e-50 203.4 207 46.4
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 6.5e-49 199.1 312 36.2
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 2.6e-42 177.2 212 40.1
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 4.5e-42 176.4 209 39.2
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 4.5e-42 176.4 195 44.1
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 3.0e-38 163.7 381 30.2
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 1.9e-32 144.4 217 38.2
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 8.8e-30 135.6 136 47.1
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 1.5e-29 134.8 136 45.6
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 2.8e-28 130.6 181 41.4
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 2.6e-26 124.0 117 46.2
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 5.9e-26 122.9 114 48.2
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 3.8e-25 120.2 150 43.3
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 1.5e-24 118.2 199 34.2
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 1.5e-21 108.2 112 44.6
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 3.5e-18 97.1 102 39.2
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 4.0e-14 83.6 302 26.8
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 3.1e-11 73.9 93 39.8
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 2.0e-10 71.2 99 41.4
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 1.5e-08 65.1 71 40.8


User provided reference genes

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