Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 9.2e-75 283.5 146 100.0
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 1.0e-36 157.1 97 72.2
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 2.0e-29 132.9 101 59.4
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 2.6e-29 132.5 100 59.0
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 2.6e-29 132.5 101 58.4
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 1.0e-28 130.6 101 59.4
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 1.3e-28 130.2 101 59.4
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 2.2e-28 129.4 102 55.9
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 2.2e-28 129.4 99 56.6
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 2.2e-28 129.4 99 56.6
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 2.2e-28 129.4 100 60.0
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 2.9e-28 129.0 101 57.4
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 2.9e-28 129.0 99 55.6
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 3.8e-28 128.6 102 57.8
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 3.8e-28 128.6 102 57.8
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 5.0e-28 128.3 101 57.4
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 6.5e-28 127.9 102 56.9
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 6.5e-28 127.9 100 57.0
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 6.5e-28 127.9 100 57.0
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 6.5e-28 127.9 102 56.9
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 6.5e-28 127.9 100 58.0
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 8.5e-28 127.5 100 58.0
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 8.5e-28 127.5 101 56.4
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 8.5e-28 127.5 100 57.0
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 1.1e-27 127.1 99 59.6
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 1.1e-27 127.1 101 58.4
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 1.4e-27 126.7 100 60.0
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 1.9e-27 126.3 101 58.4
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 1.9e-27 126.3 102 56.9
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 1.9e-27 126.3 101 58.4
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 2.5e-27 125.9 100 58.0
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 3.2e-27 125.6 101 57.4
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 3.2e-27 125.6 97 57.7
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 4.2e-27 125.2 103 56.3
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 4.2e-27 125.2 103 56.3
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 4.2e-27 125.2 102 54.9
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 4.2e-27 125.2 102 55.9
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 5.5e-27 124.8 102 55.9
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 5.5e-27 124.8 100 58.0
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 5.5e-27 124.8 102 56.9
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 7.2e-27 124.4 100 56.0
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 7.2e-27 124.4 99 57.6
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 9.4e-27 124.0 101 54.5
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 9.4e-27 124.0 101 54.5
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 9.4e-27 124.0 101 54.5
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 9.4e-27 124.0 101 54.5
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 9.4e-27 124.0 101 54.5
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 9.4e-27 124.0 100 58.0
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 9.4e-27 124.0 101 54.5
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 9.4e-27 124.0 102 54.9
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 9.4e-27 124.0 102 54.9
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 9.4e-27 124.0 102 54.9
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 9.4e-27 124.0 102 54.9
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 9.4e-27 124.0 101 56.4
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 9.4e-27 124.0 101 56.4
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 9.4e-27 124.0 102 53.9
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 1.6e-26 123.2 101 55.4
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 1.6e-26 123.2 99 56.6
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 1.6e-26 123.2 100 54.0
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 2.1e-26 122.9 100 57.0
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 2.1e-26 122.9 102 52.9
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 2.1e-26 122.9 101 55.4
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 2.1e-26 122.9 89 61.8
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 2.7e-26 122.5 99 54.5
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.7e-26 122.5 102 54.9
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 2.7e-26 122.5 100 56.0
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 2.7e-26 122.5 100 56.0
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 4.7e-26 121.7 110 52.7
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 6.1e-26 121.3 101 54.5
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 6.1e-26 121.3 102 53.9
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 7.9e-26 120.9 100 55.0
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 7.9e-26 120.9 99 55.6
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 7.9e-26 120.9 101 55.4
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 7.9e-26 120.9 102 56.9
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.0e-25 120.6 100 56.0
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 1.0e-25 120.6 100 55.0
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 1.0e-25 120.6 100 55.0
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 1.4e-25 120.2 100 57.0
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 1.4e-25 120.2 101 56.4
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 1.8e-25 119.8 99 56.6
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 2.3e-25 119.4 102 52.9
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 3.0e-25 119.0 99 56.6
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 5.1e-25 118.2 100 54.0
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 5.1e-25 118.2 99 54.5
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 1.5e-24 116.7 100 53.0
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 1.5e-24 116.7 80 63.8
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 7.4e-24 114.4 102 55.9
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 3.7e-23 112.1 100 55.0
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 4.8e-23 111.7 98 52.0
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 4.8e-23 111.7 81 61.7
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 1.4e-22 110.2 100 51.0
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 1.2e-18 97.1 76 56.6
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 1.6e-18 96.7 73 61.6
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 8.8e-17 90.9 60 66.7
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 4.4e-16 88.6 90 48.9
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 5.7e-16 88.2 60 65.0
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 5.9e-13 78.2 64 54.7
MCO04G361 Micromonas commoda HOM05D007622 ORTHO05D009409 5.9e-13 78.2 102 42.2
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 8.5e-12 74.3 93 34.4
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 1.1e-11 73.9 67 50.7


User provided reference genes

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