Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_3610 Physcomitrium patens HOM05D001518 ORTHO05D006498 2.0e-92 342.4 171 100.0
Pp3c8_1750 Physcomitrium patens HOM05D001518 ORTHO05D006498 9.6e-23 110.9 69 81.2
Pp3c3_35080 Physcomitrium patens HOM05D001518 ORTHO05D006498 3.4e-20 102.4 69 71.0
GSVIVG01032735001 Vitis vinifera HOM05D001518 ORTHO05D006498 7.4e-15 84.7 66 60.6
Nn2g11022 Nelumbo nucifera HOM05D001518 ORTHO05D006498 1.3e-14 84.0 66 60.6
MBI03_g45955_MAGBIO Magnolia biondii HOM05D001518 ORTHO05D006498 2.1e-14 83.2 66 62.1
Ciclev10030811m.g Citrus clementina HOM05D001518 ORTHO05D006498 2.8e-14 82.8 106 42.5
TWI53G0536 Tripterygium wilfordii HOM05D001518 ORTHO05D006498 2.8e-14 82.8 66 56.1
TAR623G1694 Trochodendron aralioides HOM05D001518 ORTHO05D006498 2.8e-14 82.8 66 59.1
ATR0594G213 Amborella trichopoda HOM05D001518 ORTHO05D006498 3.7e-14 82.4 66 57.6
Manes.10G007200 Manihot esculenta HOM05D001518 ORTHO05D006498 3.7e-14 82.4 66 57.6
Dinv21799 Davidia involucrata HOM05D001518 ORTHO05D006498 4.8e-14 82.0 66 57.6
PSO384G4720 Papaver somniferum HOM05D001518 ORTHO05D006498 4.8e-14 82.0 66 60.6
ClCG11G005950 Citrullus lanatus HOM05D001518 ORTHO05D006498 6.2e-14 81.6 66 59.1
Mapoly0059s0064 Marchantia polymorpha HOM05D001518 ORTHO05D006498 6.2e-14 81.6 69 60.9
Atru.chr12.120 Acer truncatum HOM05D001518 ORTHO05D006498 8.2e-14 81.3 73 52.1
Lj1C962G10 Lonicera japonica HOM05D001518 ORTHO05D006498 8.2e-14 81.3 66 54.5
SGA_v2.0_scaffold145G36000 Striga asiatica HOM05D001518 ORTHO05D006498 8.2e-14 81.3 97 47.4
PSO339G3904 Papaver somniferum HOM05D001518 ORTHO05D006498 1.1e-13 80.9 66 59.1
Sed0027098 Sechium edule HOM05D001518 ORTHO05D006498 1.1e-13 80.9 66 57.6
MELO3C008325.2 Cucumis melo HOM05D001518 ORTHO05D006498 1.4e-13 80.5 66 57.6
CsaV3_6G002050 Cucumis sativus L. HOM05D001518 ORTHO05D006498 1.4e-13 80.5 66 57.6
Aa31LG10G11040 Aethionema arabicum HOM05D001518 ORTHO05D006498 1.8e-13 80.1 66 57.6
Carub.0004s2264 Capsella rubella HOM05D001518 ORTHO05D006498 1.8e-13 80.1 66 57.6
Lj8A60T48 Lonicera japonica HOM05D001518 ORTHO05D006498 1.8e-13 80.1 73 50.7
Potri.008G074300 Populus trichocarpa HOM05D001518 ORTHO05D006498 1.8e-13 80.1 66 56.1
Sabra08G0055300 Salix brachista HOM05D001518 ORTHO05D006498 1.8e-13 80.1 66 56.1
SMO164G0201 Selaginella moellendorffii HOM05D001518 ORTHO05D006498 1.8e-13 80.1 69 50.7
Aqoxy2G00769 Aquilegia oxysepala HOM05D001518 ORTHO05D006498 2.4e-13 79.7 66 53.0
AT2G40400 Arabidopsis thaliana HOM05D001518 ORTHO05D006498 2.4e-13 79.7 93 46.2
MD01G1160000 Malus domestica HOM05D001518 ORTHO05D006498 2.4e-13 79.7 66 57.6
PGR044G0181 Punica granatum HOM05D001518 ORTHO05D006498 2.4e-13 79.7 93 47.3
SGA_v2.0_scaffold44G16654 Striga asiatica HOM05D001518 ORTHO05D006498 2.4e-13 79.7 66 57.6
Carub.0005s2289 Capsella rubella HOM05D001518 ORTHO05D006498 3.1e-13 79.3 66 57.6
Haze_17295 Corylus avellana HOM05D001518 ORTHO05D006498 3.1e-13 79.3 66 56.1
SalBow3G0728 Salvia bowleyana HOM05D001518 ORTHO05D006498 3.1e-13 79.3 97 44.3
CARHR166290 Cardamine hirsuta HOM05D001518 ORTHO05D006498 4.1e-13 79.0 66 56.1
CDE07G0354 Ceratophyllum demersum HOM05D001518 ORTHO05D006498 4.1e-13 79.0 66 56.1
ECA238G1259 Erigeron canadensis HOM05D001518 ORTHO05D006498 4.1e-13 79.0 83 48.2
Sp4g22720 Schrenkiella parvula HOM05D001518 ORTHO05D006498 4.1e-13 79.0 93 47.3
Sp5g06390 Schrenkiella parvula HOM05D001518 ORTHO05D006498 4.1e-13 79.0 93 46.2
BolC4t28323H Brassica oleracea HOM05D001518 ORTHO05D006498 5.3e-13 78.6 93 46.2
CANSAT56G0726 Cannabis sativa HOM05D001518 ORTHO05D006498 5.3e-13 78.6 66 56.1
Cfa001256 Carpinus fangiana HOM05D001518 ORTHO05D006498 5.3e-13 78.6 66 56.1
Migut.F00620 Erythranthe guttata HOM05D001518 ORTHO05D006498 5.3e-13 78.6 66 56.1
Thhalv10005804m.g Eutrema salsugineum HOM05D001518 ORTHO05D006498 5.3e-13 78.6 93 46.2
Prupe.2G258000 Prunus persica HOM05D001518 ORTHO05D006498 5.3e-13 78.6 66 56.1
RcHm_v2.0_Chr1g0371311 Rosa chinensis HOM05D001518 ORTHO05D006498 5.3e-13 78.6 66 56.1
SalBow5G3910 Salvia bowleyana HOM05D001518 ORTHO05D006498 5.3e-13 78.6 66 56.1
AL4G38220 Arabidopsis lyrata HOM05D001518 ORTHO05D006498 6.9e-13 78.2 93 46.2
AT3G56140 Arabidopsis thaliana HOM05D001518 ORTHO05D006498 6.9e-13 78.2 66 56.1
BcaC08g44762 Brassica carinata HOM05D001518 ORTHO05D006498 6.9e-13 78.2 66 56.1
A04p30770 Brassica napus HOM05D001518 ORTHO05D006498 6.9e-13 78.2 93 46.2
A07p22800 Brassica napus HOM05D001518 ORTHO05D006498 6.9e-13 78.2 66 56.1
C04p68170 Brassica napus HOM05D001518 ORTHO05D006498 6.9e-13 78.2 93 46.2
C06p23300 Brassica napus HOM05D001518 ORTHO05D006498 6.9e-13 78.2 66 56.1
BolC6t37503H Brassica oleracea HOM05D001518 ORTHO05D006498 6.9e-13 78.2 66 56.1
BraA04t18535Z Brassica rapa HOM05D001518 ORTHO05D006498 6.9e-13 78.2 93 46.2
BraA07t29945Z Brassica rapa HOM05D001518 ORTHO05D006498 6.9e-13 78.2 66 56.1
Ca_15169_v3 Cicer arietinum L. HOM05D001518 ORTHO05D006498 6.9e-13 78.2 73 46.6
Medtr3g071970 Medicago truncatula HOM05D001518 ORTHO05D006498 6.9e-13 78.2 73 47.9
QL08p064026 Quercus lobata HOM05D001518 ORTHO05D006498 6.9e-13 78.2 66 56.1
vmacro06911 Vaccinium macrocarpon HOM05D001518 ORTHO05D006498 6.9e-13 78.2 66 53.0
AL5G37460 Arabidopsis lyrata HOM05D001518 ORTHO05D006498 9.0e-13 77.8 66 56.1
Lalb_Chr08g0231381 Lupinus albus HOM05D001518 ORTHO05D006498 9.0e-13 77.8 66 50.0
Lalb_Chr11g0075101 Lupinus albus HOM05D001518 ORTHO05D006498 9.0e-13 77.8 66 51.5
Solyc06g050620.3 Solanum lycopersicum HOM05D001518 ORTHO05D006498 9.0e-13 77.8 69 47.8
Sopen06g016190 Solanum pennellii HOM05D001518 ORTHO05D006498 9.0e-13 77.8 69 47.8
PGSC0003DMG400023943 Solanum tuberosum HOM05D001518 ORTHO05D006498 9.0e-13 77.8 69 47.8
THA.LOC104810131 Tarenaya hassleriana HOM05D001518 ORTHO05D006498 9.0e-13 77.8 66 56.1
Nitab4.5_0001291g0130 Nicotiana tabacum HOM05D001518 ORTHO05D006498 1.2e-12 77.4 69 47.8
Psat5g126120 Pisum sativum HOM05D001518 ORTHO05D006498 1.2e-12 77.4 73 46.6
Rhsim03G0148300 Rhododendron simsii HOM05D001518 ORTHO05D006498 1.2e-12 77.4 97 41.2
VMungo1383G3076 Vigna mungo HOM05D001518 ORTHO05D006498 1.2e-12 77.4 66 54.5
BcaB02g07667 Brassica carinata HOM05D001518 ORTHO05D006498 1.5e-12 77.0 66 54.5
CARHR135480 Cardamine hirsuta HOM05D001518 ORTHO05D006498 1.5e-12 77.0 93 44.1
Hma1.2p1_1687F.1_g297510 Hydrangea macrophylla HOM05D001518 ORTHO05D006498 1.5e-12 77.0 73 49.3
Lsat_1_v5_gn_2_125780 Lactuca sativa HOM05D001518 ORTHO05D006498 1.5e-12 77.0 66 51.5
Peaxi162Scf00284g00235 Petunia axillaris HOM05D001518 ORTHO05D006498 1.5e-12 77.0 69 46.4
Sed0021910 Sechium edule HOM05D001518 ORTHO05D006498 1.5e-12 77.0 66 54.5
Aa31LG5G19180 Aethionema arabicum HOM05D001518 ORTHO05D006498 2.0e-12 76.6 66 53.0
CAN.G659.7 Capsicum annuum HOM05D001518 ORTHO05D006498 2.0e-12 76.6 69 49.3
Thhalv10016304m.g Eutrema salsugineum HOM05D001518 ORTHO05D006498 2.0e-12 76.6 93 45.2
Lj6g0017401 Lotus japonicus HOM05D001518 ORTHO05D006498 2.0e-12 76.6 66 51.5
Nitab4.5_0002854g0050 Nicotiana tabacum HOM05D001518 ORTHO05D006498 2.0e-12 76.6 69 47.8
Ah.16g104010 Amaranthus hybridus HOM05D001518 ORTHO05D006498 2.6e-12 76.3 66 54.5
Glyma.11G233800 Glycine max HOM05D001518 ORTHO05D006498 2.6e-12 76.3 66 53.0
arahy.Tifrunner.gnm1.ann1.1N0RH8 Arachis hypogaea HOM05D001518 ORTHO05D006498 3.4e-12 75.9 66 53.0
arahy.Tifrunner.gnm1.ann1.73F65L Arachis hypogaea HOM05D001518 ORTHO05D006498 3.4e-12 75.9 66 53.0
CiPaw.01G302600 Carya illinoinensis HOM05D001518 ORTHO05D006498 3.4e-12 75.9 66 53.0
FvH4_7g25380 Fragaria vesca HOM05D001518 ORTHO05D006498 3.4e-12 75.9 66 54.5
FAN01G2884 Fragaria x ananassa HOM05D001518 ORTHO05D006498 3.4e-12 75.9 66 54.5
FAN06G3540 Fragaria x ananassa HOM05D001518 ORTHO05D006498 3.4e-12 75.9 66 54.5
FAN10G1819 Fragaria x ananassa HOM05D001518 ORTHO05D006498 3.4e-12 75.9 66 54.5
AUR62012321 Chenopodium quinoa HOM05D001518 ORTHO05D006498 4.5e-12 75.5 66 54.5
Phvul.001G247100 Phaseolus vulgaris HOM05D001518 ORTHO05D006498 5.8e-12 75.1 66 50.0
FAN03G1866 Fragaria x ananassa HOM05D001518 ORTHO05D006498 7.6e-12 74.7 66 53.0
Cc02_g05880 Coffea canephora HOM05D001518 ORTHO05D006498 1.0e-11 74.3 72 50.0
DCAR_011861 Daucus carota HOM05D001518 ORTHO05D006498 1.0e-11 74.3 66 51.5
Glyma.18G023200 Glycine max HOM05D001518 ORTHO05D006498 1.0e-11 74.3 66 51.5
HanXRQChr07g0203501 Helianthus annuus HOM05D001518 ORTHO05D006498 1.0e-11 74.3 66 51.5
EL10Ac2g04913 Beta vulgaris HOM05D001518 ORTHO05D006498 1.3e-11 73.9 66 54.5
AUR62022961 Chenopodium quinoa HOM05D001518 ORTHO05D006498 1.3e-11 73.9 66 53.0
Oeu008086.2 Olea europaea HOM05D001518 ORTHO05D006498 1.3e-11 73.9 66 54.5
unitig_62.g23927 Utricularia gibba HOM05D001518 ORTHO05D006498 1.3e-11 73.9 66 50.0
HPP92_019734 Vanilla planifolia HOM05D001518 ORTHO05D006498 1.3e-11 73.9 66 51.5
Eucgr.J00163 Eucalyptus grandis HOM05D001518 ORTHO05D006498 1.7e-11 73.6 66 54.5
AagrBONN_evm.TU.Sc2ySwM_228.3192 Anthoceros agrestis HOM05D001518 ORTHO05D006498 2.2e-11 73.2 69 49.3
Sc11g0005470 Simmondsia chinensis HOM05D001518 ORTHO05D006498 2.2e-11 73.2 66 51.5
Duzib168G1941 Durio zibethinus HOM05D001518 ORTHO05D006498 3.8e-11 72.4 66 50.0
Migut.F01461 Erythranthe guttata HOM05D001518 ORTHO05D006498 5.0e-11 72.0 89 46.1
Hund15866 Selenicereus undatus HOM05D001518 ORTHO05D006498 6.5e-11 71.6 66 53.0
CSS0002812 Camellia sinensis var. sinensis HOM05D001518 ORTHO05D006498 8.4e-11 71.2 66 50.0
Cpa.g.sc19.113 Carica papaya HOM05D001518 ORTHO05D006498 1.1e-10 70.9 66 53.0
Gohir.A07G124600 Gossypium hirsutum HOM05D001518 ORTHO05D006498 1.1e-10 70.9 66 50.0
Os01g0826900 Oryza sativa ssp. japonica HOM05D001518 ORTHO05D006498 1.4e-10 70.5 66 53.0
FAN06G3146 Fragaria x ananassa HOM05D001518 ORTHO05D006498 1.9e-10 70.1 57 57.9
Manes.14G015672 Manihot esculenta HOM05D001518 ORTHO05D006498 1.9e-10 70.1 54 63.0
Gohir.D07G128900 Gossypium hirsutum HOM05D001518 ORTHO05D006498 2.5e-10 69.7 66 48.5
Gorai.001G139200 Gossypium raimondii HOM05D001518 ORTHO05D006498 2.5e-10 69.7 66 48.5
Zm00001eb149270 Zea mays HOM05D001518 ORTHO05D006498 4.2e-10 68.9 66 50.0
COL.COLO4_24867 Corchorus olitorius HOM05D001518 ORTHO05D006498 5.5e-10 68.6 66 50.0
Thecc.09G230400 Theobroma cacao HOM05D001518 ORTHO05D006498 7.1e-10 68.2 66 47.0
Zm00001eb351960 Zea mays HOM05D001518 ORTHO05D006498 1.3e-08 63.9 67 49.3
CBR_g38031 Chara braunii HOM05D001518 ORTHO05D006498 2.2e-06 56.6 69 39.1


User provided reference genes

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