Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 4.3e-95 351.3 174 100.0
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 9.0e-85 317.0 175 91.4
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 1.1e-74 283.5 174 83.3
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 1.4e-74 283.1 175 81.1
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 2.7e-73 278.9 174 77.6
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 6.0e-73 277.7 172 77.9
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 8.7e-72 273.9 173 77.5
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 2.0e-68 262.7 175 76.6
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 1.0e-67 260.4 175 74.3
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 3.8e-67 258.5 174 74.1
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 6.5e-67 257.7 173 72.8
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 1.9e-66 256.1 178 73.6
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 5.5e-66 254.6 177 74.6
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 7.2e-66 254.2 175 75.4
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 9.3e-66 253.8 175 73.1
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 1.2e-65 253.4 172 73.3
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 6.1e-65 251.1 172 72.7
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 1.3e-64 250.0 172 72.7
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 1.9e-63 246.1 181 69.1
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 2.2e-62 242.7 173 71.1
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 1.1e-61 240.4 174 71.3
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 2.4e-61 239.2 180 68.3
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 4.1e-61 238.4 177 69.5
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 4.1e-61 238.4 177 69.5
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 4.1e-61 238.4 179 73.7
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 6.9e-61 237.7 177 71.2
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 9.1e-61 237.3 172 69.8
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 9.1e-61 237.3 177 70.1
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 1.2e-60 236.9 175 71.4
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 1.5e-60 236.5 175 70.3
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 2.0e-60 236.1 177 70.6
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 2.0e-60 236.1 173 70.5
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 2.6e-60 235.7 177 70.6
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 3.4e-60 235.3 178 69.7
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 2.2e-59 232.6 177 68.9
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 5.0e-59 231.5 173 67.6
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 1.1e-58 230.3 176 68.8
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 1.4e-58 229.9 175 69.7
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 2.5e-58 229.2 176 68.2
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 2.5e-58 229.2 180 67.8
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 4.2e-58 228.4 180 68.3
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 5.5e-58 228.0 180 66.1
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 7.2e-58 227.6 174 67.8
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 9.4e-58 227.3 151 75.5
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 2.7e-57 225.7 179 64.8
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 1.4e-56 223.4 180 64.4
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 1.8e-56 223.0 175 66.9
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 1.1e-55 220.3 181 63.5
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 1.1e-55 220.3 181 65.2
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 1.5e-55 219.9 140 75.0
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 2.6e-55 219.2 175 67.4
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 5.7e-55 218.0 177 68.4
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 1.3e-54 216.9 174 66.1
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 2.2e-54 216.1 168 65.5
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 2.8e-54 215.7 171 65.5
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 3.7e-54 215.3 173 65.3
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 3.7e-54 215.3 180 66.1
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 4.8e-54 214.9 177 62.7
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 8.2e-54 214.2 185 63.2
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 1.1e-53 213.8 181 66.3
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 1.8e-53 213.0 174 64.9
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 3.1e-53 212.2 180 64.4
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 5.3e-53 211.5 174 63.8
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 6.9e-53 211.1 137 76.6
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 9.1e-53 210.7 168 63.7
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 1.2e-52 210.3 174 63.8
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 2.0e-52 209.5 196 58.7
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 2.6e-52 209.1 199 58.3
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 3.4e-52 208.8 118 83.1
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 3.4e-52 208.8 172 62.2
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 5.9e-52 208.0 119 90.8
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 1.7e-51 206.5 171 60.2
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 5.0e-51 204.9 173 61.8
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 6.5e-51 204.5 175 62.9
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 1.4e-50 203.4 178 61.8
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 1.9e-50 203.0 175 61.7
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 2.5e-50 202.6 173 60.7
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 2.5e-50 202.6 173 60.7
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 3.2e-50 202.2 176 65.3
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 4.2e-50 201.8 174 63.2
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 4.2e-50 201.8 174 63.2
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 5.5e-50 201.4 175 62.9
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 5.5e-50 201.4 175 62.9
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 5.5e-50 201.4 175 62.9
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 2.1e-49 199.5 174 58.0
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 2.1e-49 199.5 174 58.0
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 2.1e-49 199.5 174 58.0
vmacro09972 Vaccinium macrocarpon HOM05D007229 ORTHO05D009131 4.7e-49 198.4 177 59.3
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 6.1e-49 198.0 174 57.5
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 8.0e-49 197.6 174 58.0
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 1.0e-48 197.2 180 59.4
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 5.2e-48 194.9 173 60.7
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 1.1e-47 193.7 112 80.4
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 1.1e-47 193.7 126 73.8
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 2.6e-47 192.6 176 60.8
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 9.7e-47 190.7 151 66.9
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 2.8e-46 189.1 175 56.6
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 2.9e-43 179.1 116 71.6
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 6.5e-43 177.9 182 54.9
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 3.2e-42 175.6 176 55.1
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 9.4e-42 174.1 135 63.0
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 3.0e-40 169.1 123 65.0
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 7.5e-39 164.5 178 51.7
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.0e-32 144.1 111 64.0
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 3.0e-32 142.5 103 67.0
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 9.8e-31 137.5 174 50.6
Sed0009884 Sechium edule HOM05D007229 ORTHO05D009131 5.0e-27 125.2 102 63.7
MD01G1165900 Malus domestica HOM05D000154 ORTHO05D000092 2.6e-23 112.8 58 84.5
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 1.3e-22 110.5 111 58.6
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 1.3e-22 110.5 117 56.4
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 8.3e-22 107.8 89 65.2
Nn2g10342 Nelumbo nucifera HOM05D000154 ORTHO05D000092 1.1e-21 107.5 67 73.1
Eucgr.J00129 Eucalyptus grandis HOM05D007229 ORTHO05D009131 6.0e-12 75.1 93 51.6
Cre03.g144184 Chlamydomonas reinhardtii HOM05D007229 ORTHO05D009131 1.3e-06 57.4 67 49.3
unitig_90.g27575 Utricularia gibba HOM05D007229 ORTHO05D009131 6.4e-06 55.1 57 57.9


User provided reference genes

Program Settings