Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G050500 Populus trichocarpa HOM05D007064 ORTHO05D008772 2.7e-197 691.8 354 100.0
Sabra19G0062000 Salix brachista HOM05D007064 ORTHO05D008772 3.3e-166 588.6 329 91.5
Ciclev10020357m.g Citrus clementina HOM05D007064 ORTHO05D008772 2.5e-134 482.6 347 73.8
Thecc.05G215700 Theobroma cacao HOM05D007064 ORTHO05D008772 1.5e-131 473.4 358 71.5
Haze_00398 Corylus avellana HOM05D007064 ORTHO05D008772 5.8e-131 471.5 352 73.0
Atru.chr12.1880 Acer truncatum HOM05D007064 ORTHO05D008772 7.6e-131 471.1 344 75.3
QL09p023233 Quercus lobata HOM05D007064 ORTHO05D008772 6.4e-130 468.0 354 71.8
Gohir.A11G303500 Gossypium hirsutum HOM05D007064 ORTHO05D008772 8.4e-130 467.6 352 70.5
GSVIVG01024376001 Vitis vinifera HOM05D007064 ORTHO05D008772 2.7e-128 462.6 356 70.5
COL.COLO4_15235 Corchorus olitorius HOM05D007064 ORTHO05D008772 4.6e-128 461.8 353 72.2
TWI60G0820 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 4.6e-128 461.8 353 69.1
Gorai.007G348800 Gossypium raimondii HOM05D007064 ORTHO05D008772 1.7e-127 459.9 351 69.2
Rhsim03G0222700 Rhododendron simsii HOM05D007064 ORTHO05D008772 2.3e-127 459.5 371 67.9
CiPaw.05G216200 Carya illinoinensis HOM05D007064 ORTHO05D008772 5.1e-127 458.4 307 76.9
Duzib106G1646 Durio zibethinus HOM05D007064 ORTHO05D008772 8.7e-127 457.6 372 68.0
TAR629G0708 Trochodendron aralioides HOM05D007064 ORTHO05D008772 1.5e-126 456.8 318 76.1
Cfa016048 Carpinus fangiana HOM05D007064 ORTHO05D008772 2.5e-126 456.1 352 71.6
TWI60G1094 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 2.5e-126 456.1 353 68.3
Lj1A1033T73 Lonicera japonica HOM05D007064 ORTHO05D008772 5.6e-126 454.9 301 76.7
CANSAT78G1989 Cannabis sativa HOM05D007064 ORTHO05D008772 7.3e-126 454.5 341 71.0
CSS0020222 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 4.8e-125 451.8 310 76.1
Prupe.1G025200 Prunus persica HOM05D007064 ORTHO05D008772 4.8e-125 451.8 312 76.0
RcHm_v2.0_Chr4g0388921 Rosa chinensis HOM05D007064 ORTHO05D008772 1.4e-124 450.3 311 74.9
CSS0020425 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 1.8e-124 449.9 310 76.1
Dinv17250 Davidia involucrata HOM05D007064 ORTHO05D008772 4.0e-124 448.7 362 69.3
FAN12G0288 Fragaria x ananassa HOM05D007064 ORTHO05D008772 2.0e-123 446.4 311 74.3
FvH4_4g01950 Fragaria vesca HOM05D007064 ORTHO05D008772 4.5e-123 445.3 311 74.0
Manes.09G127400 Manihot esculenta HOM05D007064 ORTHO05D008772 7.6e-123 444.5 356 68.8
MD13G1202900 Malus domestica HOM05D007064 ORTHO05D008772 2.2e-122 443.0 329 71.4
CsaV3_3G050060 Cucumis sativus L. HOM05D007064 ORTHO05D008772 6.4e-122 441.4 307 73.9
PSO063G1297 Papaver somniferum HOM05D007064 ORTHO05D008772 6.4e-122 441.4 345 68.4
Actinidia34318 Actinidia chinensis HOM05D007064 ORTHO05D008772 1.6e-120 436.8 359 68.0
vmacro06523 Vaccinium macrocarpon HOM05D007064 ORTHO05D008772 4.6e-120 435.3 435 57.7
ClCG09G013090 Citrullus lanatus HOM05D007064 ORTHO05D008772 2.3e-119 433.0 309 72.2
MELO3C003312.2 Cucumis melo HOM05D007064 ORTHO05D008772 3.9e-119 432.2 339 67.8
Hund09801 Selenicereus undatus HOM05D007064 ORTHO05D000105 1.9e-118 429.9 313 70.0
PSO782G0881 Papaver somniferum HOM05D007064 ORTHO05D008772 2.5e-118 429.5 339 67.6
Migut.F00087 Erythranthe guttata HOM05D007064 ORTHO05D008772 4.3e-118 428.7 356 66.0
CAN.G1131.22 Capsicum annuum HOM05D007064 ORTHO05D008772 5.6e-118 428.3 346 66.8
PGSC0003DMG400003147 Solanum tuberosum HOM05D007064 ORTHO05D008772 7.4e-118 427.9 351 65.5
Sc19g0000100 Simmondsia chinensis HOM05D007064 ORTHO05D008772 4.8e-117 425.2 302 73.2
Nn1g00178 Nelumbo nucifera HOM05D007064 ORTHO05D008772 1.1e-116 424.1 313 69.6
Thhalv10013656m.g Eutrema salsugineum HOM05D007064 ORTHO05D008772 1.4e-116 423.7 315 72.1
arahy.Tifrunner.gnm1.ann1.P291P9 Arachis hypogaea HOM05D007064 ORTHO05D008772 1.8e-116 423.3 304 71.4
Nitab4.5_0000021g0660 Nicotiana tabacum HOM05D007064 ORTHO05D008772 5.3e-116 421.8 316 68.7
Solyc03g097130.3 Solanum lycopersicum HOM05D007064 ORTHO05D008772 9.0e-116 421.0 353 65.2
AT5G16810 Arabidopsis thaliana HOM05D007064 ORTHO05D008772 1.2e-115 420.6 315 72.1
AL6G27830 Arabidopsis lyrata HOM05D007064 ORTHO05D008772 1.5e-115 420.2 315 71.4
Nitab4.5_0004530g0030 Nicotiana tabacum HOM05D007064 ORTHO05D008772 1.5e-115 420.2 314 68.8
AUR62002078 Chenopodium quinoa HOM05D007064 ORTHO05D008772 2.6e-115 419.5 301 71.1
AUR62028195 Chenopodium quinoa HOM05D007064 ORTHO05D008772 2.6e-115 419.5 301 70.4
Cc02_g00210 Coffea canephora HOM05D007064 ORTHO05D008772 3.4e-115 419.1 314 69.1
Ah.04g156400 Amaranthus hybridus HOM05D007064 ORTHO05D008772 1.7e-114 416.8 301 69.1
arahy.Tifrunner.gnm1.ann1.EDBW82 Arachis hypogaea HOM05D007064 ORTHO05D008772 1.7e-114 416.8 304 70.4
Aqoxy3G02225 Aquilegia oxysepala HOM05D007064 ORTHO05D008772 8.4e-114 414.5 308 69.2
Sp6g27320 Schrenkiella parvula HOM05D007064 ORTHO05D008772 8.4e-114 414.5 315 70.8
BcaC03g18516 Brassica carinata HOM05D007064 ORTHO05D008772 9.3e-113 411.0 314 69.7
C02p08600 Brassica napus HOM05D007064 ORTHO05D008772 9.3e-113 411.0 314 69.7
BolC2t06775H Brassica oleracea HOM05D007064 ORTHO05D008772 9.3e-113 411.0 314 69.7
A02p03790 Brassica napus HOM05D007064 ORTHO05D008772 1.6e-112 410.2 317 69.1
THA.LOC104820893 Tarenaya hassleriana HOM05D007064 ORTHO05D008772 2.1e-112 409.8 358 63.7
ECA238G0775 Erigeron canadensis HOM05D007064 ORTHO05D008772 4.6e-112 408.7 305 66.9
Gohir.D11G318800 Gossypium hirsutum HOM05D007064 ORTHO05D008772 1.8e-111 406.8 269 75.5
HanXRQChr14g0451581 Helianthus annuus HOM05D007064 ORTHO05D008772 1.1e-110 404.1 338 62.1
BcaNung04953 Brassica carinata HOM05D007064 ORTHO05D008772 3.3e-110 402.5 307 70.4
Lsat_1_v5_gn_2_95061 Lactuca sativa HOM05D007064 ORTHO05D008772 5.6e-110 401.7 315 65.7
Lalb_Chr09g0320151 Lupinus albus HOM05D007064 ORTHO05D008772 5.6e-110 401.7 334 62.0
SGA_v2.0_scaffold44G16901 Striga asiatica HOM05D007064 ORTHO05D008772 1.6e-109 400.2 349 63.3
Medtr5g006230 Medicago truncatula HOM05D007064 ORTHO05D008772 2.1e-109 399.8 324 66.4
VMungo1215G2591 Vigna mungo HOM05D007064 ORTHO05D008772 1.4e-108 397.1 357 61.9
EL10Ac3g05060 Beta vulgaris HOM05D007064 ORTHO05D008772 2.4e-108 396.4 303 66.7
Glyma.11G009700 Glycine max HOM05D007064 ORTHO05D008772 2.4e-108 396.4 332 63.9
LjContig00222g0020502 Lotus japonicus HOM05D007064 ORTHO05D008772 2.4e-108 396.4 331 64.7
Phvul.002G040600 Phaseolus vulgaris HOM05D007064 ORTHO05D008772 6.9e-108 394.8 342 61.7
BraA02t05344Z Brassica rapa HOM05D007064 ORTHO05D008772 2.6e-107 392.9 315 67.9
Aa31LG11G12770 Aethionema arabicum HOM05D007064 ORTHO05D008772 4.5e-107 392.1 345 64.3
TPR.G37970 Trifolium pratense HOM05D007064 ORTHO05D008772 5.8e-107 391.7 341 61.9
ATR0829G191 Amborella trichopoda HOM05D007064 ORTHO05D008772 4.9e-106 388.7 314 63.7
Ca_24438_v3 Cicer arietinum L. HOM05D007064 ORTHO05D008772 4.9e-106 388.7 297 69.4
HPP92_025673 Vanilla planifolia HOM05D007064 ORTHO05D008772 5.5e-105 385.2 316 64.2
Psat2g189080 Pisum sativum HOM05D007064 ORTHO05D008772 9.3e-105 384.4 300 68.3
CARHR196350 Cardamine hirsuta HOM05D007064 ORTHO05D008772 8.2e-101 371.3 288 69.4
CDE11G0292 Ceratophyllum demersum HOM05D007064 ORTHO05D008772 1.1e-100 370.9 300 64.7
SalBow4G1574 Salvia bowleyana HOM05D007064 ORTHO05D008772 1.8e-100 370.2 351 59.8
Os02g0694800 Oryza sativa ssp. japonica HOM05D007064 ORTHO05D008772 3.1e-100 369.4 327 59.0
Zm00001eb187800 Zea mays HOM05D007064 ORTHO05D008772 3.1e-100 369.4 313 60.7
SalBow4G1678 Salvia bowleyana HOM05D007064 ORTHO05D008772 5.9e-99 365.2 357 59.1
Peaxi162Scf00516g00675 Petunia axillaris HOM05D007064 ORTHO05D008772 5.9e-91 338.6 315 59.4
SEGI_11081 Sequoiadendron giganteum HOM05D007064 ORTHO05D008772 5.5e-89 332.0 342 52.9
Sed0013285 Sechium edule HOM05D007064 ORTHO05D008772 3.9e-87 325.9 224 73.2
Hma1.2p1_0649F.1_g195260 Hydrangea macrophylla HOM05D007064 ORTHO05D008772 3.1e-84 316.2 211 76.8
Eucgr.K00080 Eucalyptus grandis HOM05D007064 ORTHO05D008772 1.0e-79 301.2 199 76.4
Sopen03g027870 Solanum pennellii HOM05D007064 ORTHO05D008772 1.0e-79 301.2 211 70.6
Carub.0006s1503 Capsella rubella HOM05D007064 ORTHO05D008772 1.6e-75 287.3 212 72.6
Oeu038089.3 Olea europaea HOM05D007064 ORTHO05D008772 3.0e-71 273.1 349 47.3
Pp3c23_10770 Physcomitrium patens HOM05D007064 ORTHO05D008772 3.0e-71 273.1 356 45.2
AagrBONN_evm.TU.Sc2ySwM_344.2887 Anthoceros agrestis HOM05D007064 ORTHO05D008772 2.8e-69 266.5 329 46.5
Mapoly0096s0061 Marchantia polymorpha HOM05D007064 ORTHO05D008772 1.4e-68 264.2 330 44.8
Glyma.01G233100 Glycine max HOM05D007064 ORTHO05D008772 5.2e-63 245.7 253 53.4
Cpa.g.sc43.97 Carica papaya HOM05D007064 ORTHO05D008772 3.1e-47 193.4 134 76.9
SMO343G0012 Selaginella moellendorffii HOM05D007064 ORTHO05D008772 3.3e-41 173.3 318 38.4
CBR_g8900 Chara braunii HOM05D007064 ORTHO05D000002 3.5e-35 153.3 214 43.0
Oeu043948.1 Olea europaea HOM05D007064 ORTHO05D008772 2.3e-18 97.4 65 72.3
HanXRQChr01g0005821 Helianthus annuus HOM05D007064 ORTHO05D008772 1.8e-15 87.8 70 58.6
CBR_g8898 Chara braunii HOM05D007064 ORTHO05D008772 6.4e-13 79.3 56 62.5
PRCOL_00004348 Prasinoderma coloniale HOM05D007064 ORTHO05D008772 1.1e-09 68.6 256 26.6
Psat0s4094g0040 Pisum sativum HOM05D007064 ORTHO05D008772 2.0e-06 57.8 36 75.0


User provided reference genes

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