Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G049300 Populus trichocarpa HOM05D007045 ORTHO05D008872 2.2e-56 222.2 125 100.0
Sabra19G0058900 Salix brachista HOM05D007045 ORTHO05D008872 1.3e-45 186.4 126 84.9
CiPaw.05G239000 Carya illinoinensis HOM05D007045 ORTHO05D008872 2.3e-34 149.1 129 68.2
Cfa015871 Carpinus fangiana HOM05D007045 ORTHO05D008872 4.0e-34 148.3 126 66.7
Manes.08G162500 Manihot esculenta HOM05D007045 ORTHO05D008872 4.0e-34 148.3 126 65.1
QL09p024203 Quercus lobata HOM05D007045 ORTHO05D008872 4.0e-34 148.3 126 66.7
QL09p024468 Quercus lobata HOM05D007045 ORTHO05D008872 4.0e-34 148.3 126 66.7
Duzib168G0464 Durio zibethinus HOM05D007045 ORTHO05D008872 2.2e-32 142.5 131 64.1
TAR375G0210 Trochodendron aralioides HOM05D007045 ORTHO05D008872 4.9e-32 141.4 129 63.6
TPR.G25217 Trifolium pratense HOM05D007045 ORTHO05D008872 2.4e-31 139.0 127 64.6
Ca_04126_v3 Cicer arietinum L. HOM05D007045 ORTHO05D008872 5.4e-31 137.9 129 63.6
Prupe.2G325600 Prunus persica HOM05D007045 ORTHO05D008872 7.0e-31 137.5 128 64.8
Medtr6g004010 Medicago truncatula HOM05D007045 ORTHO05D008872 1.6e-30 136.3 128 61.7
Glyma.05G000800 Glycine max HOM05D007045 ORTHO05D008872 3.5e-30 135.2 127 61.4
Nn1g01937 Nelumbo nucifera HOM05D007045 ORTHO05D008872 1.7e-29 132.9 129 59.7
Ciclev10022834m.g Citrus clementina HOM05D007045 ORTHO05D008872 5.0e-29 131.3 132 61.4
VMungo0464G1228 Vigna mungo HOM05D007045 ORTHO05D008872 8.6e-29 130.6 127 59.8
Eucgr.K00089 Eucalyptus grandis HOM05D007045 ORTHO05D008872 1.1e-28 130.2 107 68.2
Psat1g052360 Pisum sativum HOM05D007045 ORTHO05D008872 1.1e-28 130.2 125 61.6
GSVIVG01024412001 Vitis vinifera HOM05D007045 ORTHO05D008872 1.1e-28 130.2 132 59.1
arahy.Tifrunner.gnm1.ann1.X2XK4P Arachis hypogaea HOM05D007045 ORTHO05D008872 1.9e-28 129.4 133 63.2
Nitab4.5_0011930g0010 Nicotiana tabacum HOM05D007045 ORTHO05D008872 1.9e-28 129.4 108 66.7
Dinv29160 Davidia involucrata HOM05D007045 ORTHO05D008872 4.3e-28 128.3 108 68.5
Hma1.2p1_1680F.1_g297210 Hydrangea macrophylla HOM05D007045 ORTHO05D008872 1.2e-27 126.7 152 53.3
Thecc.09G264800 Theobroma cacao HOM05D007045 ORTHO05D008872 1.2e-27 126.7 131 59.5
Glyma.19G000800 Glycine max HOM05D007045 ORTHO05D008872 1.6e-27 126.3 107 67.3
Actinidia34304 Actinidia chinensis HOM05D007045 ORTHO05D008872 2.1e-27 125.9 129 60.5
arahy.Tifrunner.gnm1.ann1.X6PR1P Arachis hypogaea HOM05D007045 ORTHO05D008872 2.1e-27 125.9 105 64.8
Gohir.A09G104600 Gossypium hirsutum HOM05D007045 ORTHO05D008872 2.1e-27 125.9 134 60.4
Gohir.D09G101300 Gossypium hirsutum HOM05D007045 ORTHO05D008872 2.8e-27 125.6 134 60.4
TWI34G0185 Tripterygium wilfordii HOM05D007045 ORTHO05D008872 3.6e-27 125.2 104 67.3
Hund09789 Selenicereus undatus HOM05D007045 ORTHO05D008872 6.1e-27 124.4 99 67.7
THA.LOC104821194 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 6.1e-27 124.4 129 56.6
THA.LOC104805790 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 8.0e-27 124.0 128 57.8
Sc15g0002300 Simmondsia chinensis HOM05D007045 ORTHO05D008872 1.0e-26 123.6 108 63.9
COL.COLO4_25316 Corchorus olitorius HOM05D007045 ORTHO05D008872 1.4e-26 123.2 127 61.4
Actinidia08743 Actinidia chinensis HOM05D007045 ORTHO05D008872 1.8e-26 122.9 128 59.4
MD07G1308400 Malus domestica HOM05D007045 ORTHO05D008872 1.8e-26 122.9 108 64.8
SalBow4G0316 Salvia bowleyana HOM05D007045 ORTHO05D008872 1.8e-26 122.9 126 57.1
Gorai.006G118700 Gossypium raimondii HOM05D007045 ORTHO05D008872 2.3e-26 122.5 112 66.1
Sopen03g027710 Solanum pennellii HOM05D007045 ORTHO05D008872 2.3e-26 122.5 130 61.5
MSTRG.26931 Avicennia marina HOM05D007045 ORTHO05D008872 4.0e-26 121.7 129 59.7
SGA_v2.0_scaffold44G16886 Striga asiatica HOM05D007045 ORTHO05D008872 4.0e-26 121.7 131 55.0
Lj2g0018633 Lotus japonicus HOM05D007045 ORTHO05D008872 5.2e-26 121.3 128 57.8
PGR142G4292 Punica granatum HOM05D007045 ORTHO05D008872 6.8e-26 120.9 110 62.7
Atru.chr12.1972 Acer truncatum HOM05D007045 ORTHO05D008872 1.2e-25 120.2 106 65.1
Potri.013G091200 Populus trichocarpa HOM05D007045 ORTHO05D008872 1.2e-25 120.2 85 75.3
Solyc03g096960.3 Solanum lycopersicum HOM05D007045 ORTHO05D008872 1.5e-25 119.8 130 60.8
Thhalv10009120m.g Eutrema salsugineum HOM05D007045 ORTHO05D008872 2.6e-25 119.0 126 57.9
CANSAT56G0844 Cannabis sativa HOM05D007045 ORTHO05D008872 3.4e-25 118.6 82 73.2
CANSAT56G3248 Cannabis sativa HOM05D007045 ORTHO05D008872 3.4e-25 118.6 82 73.2
Nitab4.5_0000021g0510 Nicotiana tabacum HOM05D007045 ORTHO05D008872 3.4e-25 118.6 128 54.7
AT1G08580 Arabidopsis thaliana HOM05D007045 ORTHO05D008872 5.8e-25 117.9 126 55.6
CAN.G303.80 Capsicum annuum HOM05D007045 ORTHO05D008872 5.8e-25 117.9 126 54.0
Lsat_1_v5_gn_9_47440 Lactuca sativa HOM05D007045 ORTHO05D008872 5.8e-25 117.9 101 61.4
FvH4_7g33930 Fragaria vesca HOM05D007045 ORTHO05D008872 2.2e-24 115.9 129 54.3
FAN01G0253 Fragaria x ananassa HOM05D007045 ORTHO05D008872 2.2e-24 115.9 129 54.3
Sp1g07240 Schrenkiella parvula HOM05D007045 ORTHO05D008872 2.2e-24 115.9 126 57.1
CSS0008098 Camellia sinensis var. sinensis HOM05D007045 ORTHO05D008872 2.9e-24 115.5 128 56.2
AUR62002059 Chenopodium quinoa HOM05D007045 ORTHO05D008872 2.9e-24 115.5 128 57.0
FAN03G1405 Fragaria x ananassa HOM05D007045 ORTHO05D008872 2.9e-24 115.5 129 54.3
EL10Ac3g05081 Beta vulgaris HOM05D007045 ORTHO05D008872 3.7e-24 115.2 99 64.6
A06p05570 Brassica napus HOM05D007045 ORTHO05D008872 8.3e-24 114.0 127 54.3
BraA06t23765Z Brassica rapa HOM05D007045 ORTHO05D008872 8.3e-24 114.0 127 54.3
RcHm_v2.0_Chr1g0384121 Rosa chinensis HOM05D007045 ORTHO05D008872 8.3e-24 114.0 129 58.1
Oeu041498.1 Olea europaea HOM05D007045 ORTHO05D008872 1.1e-23 113.6 108 60.2
Phvul.004G000900 Phaseolus vulgaris HOM05D007045 ORTHO05D008872 1.4e-23 113.2 129 55.8
ECA232G1212 Erigeron canadensis HOM05D007045 ORTHO05D008872 1.9e-23 112.8 101 59.4
HanXRQChr05g0141731 Helianthus annuus HOM05D007045 ORTHO05D008872 1.9e-23 112.8 100 61.0
unitig_92.g28229 Utricularia gibba HOM05D007045 ORTHO05D008872 1.9e-23 112.8 127 58.3
Migut.F00099 Erythranthe guttata HOM05D007045 ORTHO05D008872 2.4e-23 112.5 123 55.3
PGSC0003DMG400000566 Solanum tuberosum HOM05D007045 ORTHO05D008872 2.4e-23 112.5 101 61.4
AUR62028173 Chenopodium quinoa HOM05D007045 ORTHO05D008872 3.2e-23 112.1 130 58.5
CDE03G0192 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 7.0e-23 110.9 132 58.3
BcaC07g41937 Brassica carinata HOM05D007045 ORTHO05D008872 9.2e-23 110.5 126 52.4
Ah.04g156750 Amaranthus hybridus HOM05D007045 ORTHO05D008872 1.2e-22 110.2 100 64.0
vmacro10189 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 1.2e-22 110.2 77 71.4
vmacro23523 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 1.2e-22 110.2 77 71.4
BcaB07g34101 Brassica carinata HOM05D007045 ORTHO05D008872 1.6e-22 109.8 127 52.8
C05p06680 Brassica napus HOM05D007045 ORTHO05D008872 1.6e-22 109.8 127 52.8
BolC5t29428H Brassica oleracea HOM05D007045 ORTHO05D008872 1.6e-22 109.8 127 52.8
AL1G19010 Arabidopsis lyrata HOM05D007045 ORTHO05D008872 3.5e-22 108.6 126 55.6
DCAR_020406 Daucus carota HOM05D007045 ORTHO05D008872 3.5e-22 108.6 100 60.0
SalBow4G2109 Salvia bowleyana HOM05D007045 ORTHO05D008872 4.6e-22 108.2 155 45.2
Aa31sc20G150 Aethionema arabicum HOM05D007045 ORTHO05D008872 6.0e-22 107.8 129 52.7
BraA09t41928Z Brassica rapa HOM05D007045 ORTHO05D008872 6.0e-22 107.8 127 52.8
A09p65840 Brassica napus HOM05D007045 ORTHO05D008872 1.0e-21 107.1 127 52.0
Peaxi162Scf00745g00819 Petunia axillaris HOM05D007045 ORTHO05D008872 1.0e-21 107.1 87 63.2
FAN10G3708 Fragaria x ananassa HOM05D007045 ORTHO05D008872 1.3e-21 106.7 103 59.2
HPP92_009021 Vanilla planifolia HOM05D007045 ORTHO05D008872 1.3e-21 106.7 109 56.9
C08p49930 Brassica napus HOM05D007045 ORTHO05D008872 2.3e-21 105.9 127 52.0
MD01G1235600 Malus domestica HOM05D007045 ORTHO05D008872 2.3e-21 105.9 78 69.2
BolC8t52521H Brassica oleracea HOM05D007045 ORTHO05D008872 3.0e-21 105.5 127 52.0
Aqoxy3G02091 Aquilegia oxysepala HOM05D007045 ORTHO05D008872 5.0e-21 104.8 130 52.3
PSO063G7366 Papaver somniferum HOM05D007045 ORTHO05D008872 6.6e-21 104.4 135 52.6
PSO782G4413 Papaver somniferum HOM05D007045 ORTHO05D008872 2.5e-20 102.4 109 57.8
Sed0010546 Sechium edule HOM05D007045 ORTHO05D008872 2.5e-20 102.4 130 56.2
CARHR008480 Cardamine hirsuta HOM05D007045 ORTHO05D008872 3.3e-20 102.1 125 52.0
CDE06G1066 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 9.5e-20 100.5 91 58.2
CsaV3_3G015710 Cucumis sativus L. HOM05D007045 ORTHO05D008872 9.5e-20 100.5 106 56.6
MELO3C006770.2 Cucumis melo HOM05D007045 ORTHO05D008872 1.2e-19 100.1 106 56.6
ATR0829G056 Amborella trichopoda HOM05D007045 ORTHO05D008872 1.8e-18 96.3 116 50.0
Cc02_g00300 Coffea canephora HOM05D007045 ORTHO05D008872 3.1e-18 95.5 139 48.2
ClCG05G007020 Citrullus lanatus HOM05D007045 ORTHO05D008872 1.2e-17 93.6 106 53.8
Carub.0001s0794 Capsella rubella HOM05D007045 ORTHO05D008872 1.9e-15 86.3 70 65.7
Os02g0604100 Oryza sativa ssp. japonica HOM05D007045 ORTHO05D008872 2.7e-14 82.4 132 50.8
MELO3C032558.2 Cucumis melo HOM05D007045 ORTHO05D008872 2.3e-13 79.3 77 58.4
Zm00001eb246550 Zea mays HOM05D007045 ORTHO05D008872 4.0e-10 68.6 131 42.7
CBR_g50944 Chara braunii HOM05D007045 ORTHO05D008872 1.9e-07 59.7 109 35.8
Mapoly0084s0018 Marchantia polymorpha HOM05D007045 ORTHO05D008872 2.1e-06 56.2 101 33.7
Pp3c13_5290 Physcomitrium patens HOM05D007045 ORTHO05D008872 4.6e-06 55.1 107 40.2


User provided reference genes

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