Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 0.0e+00 1331.2 703 100.0
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 0.0e+00 1212.6 697 87.2
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 1.2e-252 876.7 711 62.9
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 1.4e-232 810.1 710 59.4
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 2.9e-230 802.4 718 59.3
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 5.4e-229 798.1 708 60.2
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 2.7e-228 795.8 709 60.5
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 1.6e-220 770.0 702 58.4
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 8.6e-219 764.2 712 57.7
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 5.2e-216 755.0 710 56.6
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 3.4e-215 752.3 705 57.2
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 6.4e-214 748.0 707 58.0
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 1.9e-213 746.5 711 55.6
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 1.7e-211 740.0 614 61.4
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 3.0e-211 739.2 707 57.1
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 5.1e-211 738.4 707 57.0
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 2.5e-210 736.1 707 57.0
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 3.3e-210 735.7 709 55.0
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 1.6e-209 733.4 714 54.6
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 4.7e-209 731.9 707 56.6
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 6.2e-209 731.5 709 56.0
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 3.1e-208 729.2 712 54.6
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 8.9e-208 727.6 713 55.1
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 2.2e-206 723.0 711 56.3
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 2.4e-205 719.5 718 53.9
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 4.6e-204 715.3 714 54.8
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 7.8e-204 714.5 714 54.1
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 1.3e-203 713.8 646 57.6
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 5.1e-203 711.8 710 53.5
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 8.6e-203 711.1 790 49.2
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 7.3e-202 708.0 712 55.9
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 3.6e-201 705.7 712 53.9
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 6.2e-201 704.9 713 54.7
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 8.1e-201 704.5 712 53.8
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 1.7e-195 686.8 611 57.9
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 1.7e-195 686.8 686 53.8
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 1.1e-194 684.1 714 53.2
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 1.5e-194 683.7 662 56.2
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 1.3e-193 680.6 637 55.3
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.8e-193 679.5 715 51.3
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 3.1e-192 676.0 702 53.4
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 1.3e-190 670.6 689 53.0
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 1.7e-190 670.2 564 62.8
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 2.2e-190 669.8 675 52.1
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 3.8e-190 669.1 676 52.1
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 1.6e-188 663.7 708 50.8
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 1.3e-187 660.6 711 52.0
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 5.1e-187 658.7 711 50.9
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 1.1e-186 657.5 635 55.3
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 7.3e-186 654.8 705 51.6
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 1.3e-185 654.1 646 53.6
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 3.6e-185 652.5 713 51.2
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 4.8e-185 652.1 717 49.9
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 1.8e-184 650.2 699 51.6
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 4.0e-184 649.0 714 50.6
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 4.0e-184 649.0 711 51.3
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 1.3e-182 644.0 713 50.6
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 2.4e-181 639.8 749 47.5
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 4.2e-181 639.0 730 49.0
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 1.6e-180 637.1 669 52.0
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 2.7e-180 636.3 668 51.8
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 2.7e-180 636.3 668 51.8
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 6.0e-180 635.2 715 50.8
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 1.8e-179 633.6 669 52.0
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 5.6e-178 628.6 480 68.1
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 2.1e-177 626.7 712 50.3
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 4.8e-177 625.5 622 55.3
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 1.8e-176 623.6 691 50.4
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 9.0e-176 621.3 543 58.4
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.6e-175 619.8 732 47.1
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 2.2e-174 616.7 633 52.3
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.8e-171 607.1 672 50.3
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 4.8e-169 599.0 668 49.3
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 1.7e-166 590.5 491 62.7
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 1.8e-163 580.5 728 47.5
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.6e-161 573.9 666 50.6
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 2.2e-161 573.5 725 46.1
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 3.8e-158 562.8 640 48.4
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 6.5e-158 562.0 530 56.2
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.4e-157 560.8 677 49.3
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 4.8e-153 545.8 503 57.7
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 6.5e-150 535.4 615 46.5
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 6.1e-148 528.9 704 44.9
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 2.0e-146 523.9 668 44.3
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 1.3e-142 511.1 690 46.8
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.1e-138 498.0 607 47.8
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 2.7e-135 486.9 375 65.3
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.2e-132 478.0 608 46.9
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 1.0e-131 474.9 356 66.0
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 4.4e-130 469.5 526 48.5
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 6.3e-129 465.7 501 50.9
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 1.2e-124 451.4 310 71.3
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 2.1e-116 424.1 358 60.6
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 4.1e-104 383.3 309 61.5
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 4.1e-104 383.3 624 37.5
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 6.2e-100 369.4 421 51.3
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 4.4e-98 363.2 343 55.7
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 6.6e-94 349.4 337 55.2
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 3.9e-86 323.6 658 33.1
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 6.2e-84 316.2 374 46.8
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 1.5e-77 295.0 377 44.0
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 3.6e-76 290.4 696 31.3
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 2.8e-68 264.2 531 34.5
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 1.2e-66 258.8 329 45.6
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 3.8e-65 253.8 611 30.4
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 1.9e-61 241.5 330 47.3
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 2.9e-57 227.6 558 30.1
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 6.0e-55 219.9 398 37.9
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 2.1e-47 194.9 159 54.7
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 6.3e-44 183.3 183 53.6
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 2.0e-42 178.3 218 45.0
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 3.2e-40 171.0 328 35.7
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 2.6e-37 161.4 136 56.6
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-34 151.8 240 40.0
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.6e-34 151.4 219 41.6
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 8.5e-33 146.4 124 54.0
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 4.7e-31 140.6 136 44.1
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.3e-30 138.3 254 34.6
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 9.1e-19 99.8 77 62.3
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 2.2e-17 95.1 114 50.0
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 3.8e-17 94.4 298 28.2
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 1.2e-15 89.4 170 34.1
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 1.2e-15 89.4 81 56.8
Pp3c24_3750 Physcomitrium patens HOM05D028917 ORTHO05D023487 8.8e-14 83.2 296 24.3
MCO09G126 Micromonas commoda HOM05D006226 ORTHO05D007738 1.3e-09 69.3 211 28.4
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 1.7e-09 68.9 65 46.2
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 2.3e-09 68.6 132 34.1
PRCOL_00000419 Prasinoderma coloniale HOM05D006226 ORTHO05D023487 3.2e-08 64.7 221 24.0
CDE04G0435 Ceratophyllum demersum HOM05D006226 ORTHO05D007738 4.7e-07 60.8 116 35.3


User provided reference genes

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