Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 1.0e-237 826.2 397 100.0
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 1.1e-186 656.8 395 79.7
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 1.9e-138 496.5 396 62.1
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 3.1e-125 452.6 408 55.1
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 3.8e-123 445.7 400 56.2
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 7.2e-122 441.4 401 56.6
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 1.6e-121 440.3 402 56.5
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 3.6e-121 439.1 406 54.9
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 1.1e-117 427.6 409 52.3
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 1.1e-114 417.5 412 53.9
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 2.5e-114 416.4 407 51.6
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 2.5e-114 416.4 406 53.4
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 4.2e-114 415.6 400 53.5
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 7.2e-114 414.8 410 52.4
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 7.2e-114 414.8 411 54.0
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 7.2e-114 414.8 403 51.4
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 7.2e-114 414.8 398 52.0
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 1.2e-113 414.1 400 53.5
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 1.2e-113 414.1 402 53.7
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 1.6e-113 413.7 400 53.5
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 4.7e-113 412.1 406 53.0
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 6.1e-113 411.8 409 54.0
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 1.0e-112 411.0 385 54.0
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 1.8e-112 410.2 404 54.2
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 2.2e-110 403.3 411 49.1
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 2.8e-110 402.9 407 49.9
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 8.3e-110 401.4 412 51.7
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 1.2e-108 397.5 411 49.6
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 1.2e-108 397.5 407 49.9
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 2.0e-108 396.7 400 53.2
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 2.0e-108 396.7 412 51.7
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 4.5e-108 395.6 405 48.1
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 1.0e-107 394.4 403 48.1
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 9.5e-106 387.9 385 51.7
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 3.6e-105 386.0 399 50.6
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 3.0e-104 382.9 384 52.3
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 1.4e-101 374.0 408 45.1
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 4.1e-101 372.5 408 44.9
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 1.6e-100 370.5 378 51.6
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 3.5e-100 369.4 409 47.7
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 5.9e-100 368.6 404 45.3
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 2.9e-99 366.3 406 46.3
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 8.6e-99 364.8 395 48.6
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 3.3e-98 362.8 406 45.6
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 8.6e-91 338.2 330 51.8
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 8.6e-91 338.2 370 47.0
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 1.5e-90 337.4 415 44.1
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 4.3e-90 335.9 414 43.7
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 5.6e-90 335.5 407 43.5
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 4.7e-89 332.4 414 43.0
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 4.7e-89 332.4 414 43.0
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 8.0e-89 331.6 414 43.7
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 1.1e-88 331.3 414 43.2
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.8e-88 330.5 330 50.9
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 4.0e-88 329.3 414 43.0
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 8.3e-86 321.6 406 44.3
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 1.6e-84 317.4 393 44.0
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 3.0e-83 313.2 302 53.0
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 3.9e-83 312.8 330 50.3
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 3.6e-81 306.2 332 47.3
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 1.8e-80 303.9 407 40.8
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 6.8e-80 302.0 401 40.4
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 9.9e-79 298.1 375 42.4
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 2.2e-78 297.0 375 42.7
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 1.9e-77 293.9 375 42.4
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 7.1e-77 292.0 312 48.1
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 1.4e-72 277.7 359 41.8
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 3.3e-66 256.5 399 38.8
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 1.7e-62 244.2 389 36.8
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 1.5e-47 194.5 217 49.3
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 8.4e-38 162.2 251 36.7
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 8.5e-22 109.0 134 40.3


User provided reference genes

Program Settings