Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 2.3e-102 375.6 188 100.0
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 3.9e-94 348.2 188 92.6
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 3.7e-68 261.9 193 71.0
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 1.3e-65 253.4 188 68.6
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 2.1e-63 246.1 171 74.3
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 4.7e-63 245.0 183 73.2
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 6.1e-63 244.6 191 68.1
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 2.3e-62 242.7 193 68.4
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 5.2e-62 241.5 181 72.4
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 5.2e-62 241.5 191 67.0
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 8.8e-62 240.7 193 70.5
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 5.7e-61 238.0 188 67.0
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 1.3e-60 236.9 175 70.3
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 1.7e-60 236.5 189 65.6
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 1.7e-60 236.5 188 66.5
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 2.8e-60 235.7 188 66.5
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 4.9e-60 235.0 188 67.6
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 6.3e-60 234.6 182 70.9
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 6.3e-60 234.6 193 65.3
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 1.1e-59 233.8 141 82.3
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 1.1e-59 233.8 124 89.5
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 1.8e-59 233.0 182 69.8
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 3.1e-59 232.3 188 66.0
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 5.4e-59 231.5 195 66.7
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 9.2e-59 230.7 189 67.2
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 9.2e-59 230.7 178 66.3
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 1.2e-58 230.3 202 63.4
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 2.0e-58 229.6 190 63.2
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 3.5e-58 228.8 155 71.0
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 5.9e-58 228.0 188 64.9
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 7.8e-58 227.6 151 73.5
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 7.8e-58 227.6 159 71.7
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 1.3e-57 226.9 182 67.0
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 2.3e-57 226.1 120 89.2
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 3.8e-57 225.3 191 63.9
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 5.0e-57 224.9 190 62.6
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 6.6e-57 224.6 192 63.0
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 6.6e-57 224.6 194 64.4
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 8.6e-57 224.2 195 64.6
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 1.1e-56 223.8 181 66.9
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 1.5e-56 223.4 123 82.9
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 1.9e-56 223.0 184 62.0
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 1.9e-56 223.0 184 62.0
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 4.3e-56 221.9 144 75.0
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 4.3e-56 221.9 118 86.4
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 4.3e-56 221.9 118 87.3
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 5.6e-56 221.5 185 63.2
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 5.6e-56 221.5 174 66.7
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 5.6e-56 221.5 118 84.7
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 5.6e-56 221.5 118 86.4
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 5.6e-56 221.5 182 65.4
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 7.3e-56 221.1 120 82.5
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 7.3e-56 221.1 147 72.8
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 9.5e-56 220.7 182 64.3
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 1.2e-55 220.3 121 81.8
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 1.2e-55 220.3 195 63.1
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 1.2e-55 220.3 118 86.4
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 1.6e-55 219.9 183 65.0
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 2.1e-55 219.5 147 73.5
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 2.1e-55 219.5 190 63.2
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 2.8e-55 219.2 194 63.4
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 3.6e-55 218.8 187 62.6
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 4.7e-55 218.4 144 72.2
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 4.7e-55 218.4 159 67.3
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 6.1e-55 218.0 194 61.9
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 6.1e-55 218.0 187 62.6
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 6.1e-55 218.0 119 82.4
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 6.1e-55 218.0 202 59.9
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 8.0e-55 217.6 186 62.9
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 8.0e-55 217.6 141 74.5
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 1.0e-54 217.2 194 61.3
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 1.0e-54 217.2 188 60.1
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 1.0e-54 217.2 184 62.0
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 1.4e-54 216.9 143 75.5
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 1.8e-54 216.5 181 63.0
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 2.3e-54 216.1 139 77.7
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 2.3e-54 216.1 187 61.0
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 3.0e-54 215.7 148 73.0
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 3.0e-54 215.7 138 73.2
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 6.8e-54 214.5 186 62.4
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 1.2e-53 213.8 127 79.5
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 2.0e-53 213.0 127 77.2
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 2.6e-53 212.6 129 75.2
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 2.6e-53 212.6 187 59.9
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 4.4e-53 211.8 162 66.7
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 7.5e-53 211.1 164 65.9
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 1.3e-52 210.3 199 59.3
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 2.9e-52 209.1 132 76.5
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 2.9e-52 209.1 153 68.6
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 8.3e-52 207.6 156 64.1
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 7.3e-48 194.5 158 60.8
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 4.7e-47 191.8 167 58.7
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 1.4e-46 190.3 136 67.6
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 2.3e-46 189.5 174 56.3
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 2.3e-46 189.5 120 68.3
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 6.8e-46 188.0 170 56.5
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 9.8e-45 184.1 198 57.6
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 2.9e-44 182.6 158 55.1
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 4.9e-44 181.8 203 53.2
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 4.9e-44 181.8 121 67.8
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 6.4e-44 181.4 177 55.9
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 1.1e-40 170.6 99 76.8
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 2.5e-40 169.5 152 55.3
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 3.4e-37 159.1 158 47.5
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 6.4e-36 154.8 122 60.7
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 1.1e-35 154.1 129 56.6
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 6.0e-34 148.3 116 56.9
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 2.9e-28 129.4 129 52.7
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 1.3e-25 120.6 98 62.2
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 8.6e-25 117.9 100 62.0
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 1.5e-24 117.1 65 76.9
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 2.4e-22 109.8 69 73.9
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 4.4e-21 105.5 125 47.2
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 1.1e-19 100.9 116 45.7
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 1.0e-17 94.4 62 67.7
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 1.9e-11 73.6 97 49.5
Sed0005624 Sechium edule HOM05D006706 ORTHO05D373521 3.7e-07 59.3 60 48.3


User provided reference genes

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