Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 1.0e-60 236.5 113 100.0
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 8.2e-55 216.9 113 90.3
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 2.0e-53 212.2 113 87.6
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 8.0e-50 200.3 113 83.2
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 4.4e-48 194.5 116 81.0
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 4.4e-48 194.5 116 81.9
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 1.3e-47 193.0 119 75.6
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 3.7e-47 191.4 113 79.6
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 4.8e-47 191.0 113 81.4
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 6.3e-47 190.7 113 77.9
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 1.8e-46 189.1 113 81.4
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 7.0e-46 187.2 97 90.7
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 2.0e-45 185.7 116 77.6
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 3.5e-45 184.9 115 76.5
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 4.5e-45 184.5 115 77.4
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 1.0e-44 183.3 108 76.9
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 1.0e-44 183.3 118 74.6
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 1.3e-44 183.0 115 77.4
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 3.8e-44 181.4 117 74.4
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 3.8e-44 181.4 115 73.9
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 5.0e-44 181.0 109 80.7
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 6.5e-44 180.6 110 77.3
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 1.1e-43 179.9 112 75.9
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 1.9e-43 179.1 123 74.8
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 1.9e-43 179.1 123 74.8
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 2.5e-43 178.7 103 81.6
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 2.5e-43 178.7 113 74.3
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 2.5e-43 178.7 117 74.4
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 3.2e-43 178.3 118 74.6
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 4.2e-43 177.9 113 76.1
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 5.5e-43 177.6 116 75.0
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 5.5e-43 177.6 109 76.1
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 5.5e-43 177.6 109 76.1
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 5.5e-43 177.6 95 85.3
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 5.5e-43 177.6 113 73.5
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 7.2e-43 177.2 111 73.9
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 7.2e-43 177.2 109 75.2
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 9.4e-43 176.8 111 78.4
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 1.6e-42 176.0 116 73.3
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 1.6e-42 176.0 114 77.2
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 2.1e-42 175.6 129 67.4
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 2.1e-42 175.6 97 85.6
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 2.1e-42 175.6 114 76.3
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 2.7e-42 175.3 113 73.5
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.7e-42 175.3 113 73.5
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.7e-42 175.3 113 73.5
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.7e-42 175.3 113 73.5
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 2.7e-42 175.3 114 76.3
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 2.7e-42 175.3 113 75.2
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 4.7e-42 174.5 114 75.4
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 6.1e-42 174.1 104 79.8
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 8.0e-42 173.7 113 71.7
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 8.0e-42 173.7 108 76.9
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 1.0e-41 173.3 113 74.3
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 2.3e-41 172.2 102 78.4
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 2.3e-41 172.2 95 83.2
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 3.0e-41 171.8 108 75.9
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 1.2e-40 169.9 114 72.8
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.5e-40 169.5 113 71.7
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 2.0e-40 169.1 111 71.2
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 7.5e-40 167.2 115 72.2
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 7.5e-40 167.2 101 81.2
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 1.7e-39 166.0 111 69.4
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 2.8e-39 165.2 127 63.8
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 4.8e-39 164.5 110 68.2
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 4.8e-39 164.5 96 80.2
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 6.3e-39 164.1 113 69.0
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 8.3e-39 163.7 114 72.8
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 8.3e-39 163.7 113 72.6
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 1.1e-38 163.3 107 73.8
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 1.8e-38 162.5 120 65.8
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 2.4e-38 162.2 102 75.5
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 3.1e-38 161.8 95 76.8
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 5.4e-38 161.0 98 75.5
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 5.4e-38 161.0 107 69.2
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 9.1e-38 160.2 98 74.5
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 1.2e-37 159.8 107 68.2
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 1.2e-37 159.8 107 68.2
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 1.2e-37 159.8 107 68.2
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 1.2e-37 159.8 107 68.2
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 1.2e-37 159.8 117 65.0
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 3.5e-37 158.3 118 68.6
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 4.5e-37 157.9 99 73.7
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 6.5e-36 154.1 115 67.0
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 5.5e-35 151.0 115 62.6
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 5.5e-35 151.0 81 85.2
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 1.4e-30 136.3 103 63.1
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 2.7e-29 132.1 101 59.4
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 3.5e-29 131.7 95 58.9
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 3.8e-28 128.3 95 66.3
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 1.1e-27 126.7 86 74.4
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 1.2e-26 123.2 102 63.7
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 1.0e-25 120.2 93 54.8
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 2.6e-24 115.5 90 61.1
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 5.7e-24 114.4 101 50.5
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 1.1e-22 110.2 64 82.8
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 4.6e-21 104.8 60 81.7
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 3.1e-17 92.0 77 51.9
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 2.5e-11 72.4 92 32.6
VMungo1383G1925 Vigna mungo HOM05D007622 ORTHO05D009409 2.8e-10 68.9 57 56.1
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 1.1e-09 67.0 53 60.4


User provided reference genes

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