Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 1.4e-285 985.7 533 100.0
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 4.7e-225 784.6 582 76.8
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 1.2e-207 726.9 541 74.3
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 2.8e-185 652.5 477 76.5
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 7.1e-157 558.1 543 60.2
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 9.3e-149 531.2 542 57.9
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 4.6e-148 528.9 543 57.5
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 3.4e-143 512.7 544 55.7
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 4.5e-143 512.3 543 56.2
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 1.3e-137 494.2 551 54.1
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 1.4e-133 480.7 586 52.4
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 1.9e-133 480.3 536 54.9
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 4.2e-133 479.2 540 54.4
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 3.5e-132 476.1 581 51.3
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 7.4e-130 468.4 548 54.4
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.3e-129 467.6 536 53.4
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 4.8e-129 465.7 536 53.2
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.4e-128 464.2 545 53.0
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 3.1e-128 463.0 549 51.9
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 2.7e-124 449.9 504 55.2
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 1.8e-123 447.2 561 49.7
CANSAT78G0404 Cannabis sativa HOM05D007575 ORTHO05D009611 2.6e-119 433.3 538 49.6
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 7.7e-119 431.8 544 50.2
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 6.5e-118 428.7 546 50.0
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 3.3e-114 416.4 602 45.5
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 3.3e-114 416.4 603 45.6
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 5.7e-114 415.6 534 49.8
ClCG08G004240 Citrullus lanatus HOM05D007575 ORTHO05D009611 3.7e-113 412.9 544 48.2
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 3.7e-113 412.9 534 49.6
Eucgr.A00245 Eucalyptus grandis HOM05D007575 ORTHO05D009611 4.8e-113 412.5 543 48.8
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 3.1e-112 409.8 547 47.3
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 2.0e-111 407.1 601 45.6
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 2.2e-110 403.7 540 47.0
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 3.8e-110 402.9 534 49.1
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 8.5e-110 401.7 544 46.9
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 8.5e-110 401.7 546 47.6
Thhalv10001393m.g Eutrema salsugineum HOM05D007575 ORTHO05D009611 2.5e-109 400.2 538 47.4
FvH4_4g11270 Fragaria vesca HOM05D007575 ORTHO05D009611 4.2e-109 399.4 602 44.5
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 7.2e-109 398.7 545 47.0
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 3.6e-108 396.4 537 46.7
Sed0001943 Sechium edule HOM05D007575 ORTHO05D009611 3.6e-108 396.4 545 46.6
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 7.4e-106 388.7 570 42.8
Lj6A70T54 Lonicera japonica HOM05D007575 ORTHO05D009611 1.3e-105 387.9 646 43.5
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 2.8e-105 386.7 539 45.3
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 2.8e-105 386.7 550 45.3
Carub.0004s2568 Capsella rubella HOM05D007575 ORTHO05D009611 6.3e-105 385.6 564 43.6
AT2G43210 Arabidopsis thaliana HOM05D007575 ORTHO05D009611 5.3e-104 382.5 554 43.7
PGR083G2249 Punica granatum HOM05D007575 ORTHO05D009611 9.1e-104 381.7 540 45.9
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 1.0e-102 378.3 599 44.7
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 5.0e-102 375.9 545 44.4
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 6.5e-102 375.6 536 44.2
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 8.5e-102 375.2 548 46.4
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 2.5e-101 373.6 551 45.7
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 9.4e-101 371.7 534 44.6
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 1.6e-100 370.9 539 45.6
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 4.7e-100 369.4 607 41.5
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 8.0e-100 368.6 540 44.8
FAN22G0659 Fragaria x ananassa HOM05D007575 ORTHO05D009611 4.8e-97 359.4 616 42.9
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 1.1e-96 358.2 545 44.4
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 4.1e-96 356.3 533 43.7
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 1.3e-94 351.3 529 44.8
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 1.7e-94 350.9 555 43.4
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 1.7e-94 350.9 549 43.5
A04p32490 Brassica napus HOM05D007575 ORTHO05D009611 1.9e-93 347.4 580 41.2
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 1.9e-93 347.4 541 42.9
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 4.4e-90 336.3 538 43.3
Peaxi162Scf00286g00233 Petunia axillaris HOM05D007575 ORTHO05D009611 2.5e-85 320.5 564 41.7
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 2.8e-84 317.0 553 38.7
Lj6A61T39 Lonicera japonica HOM05D007575 ORTHO05D009611 7.0e-80 302.4 379 52.2
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 1.2e-79 301.6 565 39.1
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 8.0e-76 288.9 554 37.9
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 8.0e-76 288.9 541 38.8
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 5.8e-74 282.7 453 43.9
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 1.3e-73 281.6 459 41.8
HPP92_002869 Vanilla planifolia HOM05D007575 ORTHO05D009611 2.2e-73 280.8 509 39.1
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 3.7e-73 280.0 534 35.4
Nitab4.5_0001049g0060 Nicotiana tabacum HOM05D007575 ORTHO05D009611 2.0e-71 274.2 465 41.7
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 2.7e-71 273.9 552 35.3
Nitab4.5_0004962g0010 Nicotiana tabacum HOM05D007575 ORTHO05D009611 1.5e-69 268.1 465 41.5
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 4.3e-69 266.5 455 41.1
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 5.2e-59 233.0 471 36.1
SEGI_13760 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 2.4e-43 181.0 397 32.5
Mapoly0164s0007 Marchantia polymorpha HOM05D007575 ORTHO05D009611 1.9e-40 171.4 453 29.6
Hma1.2p1_1477F.1_g285910 Hydrangea macrophylla HOM05D007575 ORTHO05D009611 2.3e-38 164.5 416 37.0
CSS0007449 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 2.4e-35 154.5 365 38.4
Eucgr.A00051 Eucalyptus grandis HOM05D007575 ORTHO05D009611 4.2e-32 143.7 170 50.6
Pp3c20_2320 Physcomitrium patens HOM05D007575 ORTHO05D009611 1.2e-31 142.1 551 26.9
TAR633G1182 Trochodendron aralioides HOM05D007575 ORTHO05D009611 1.3e-30 138.7 170 48.8
AagrBONN_evm.TU.Sc2ySwM_344.3290 Anthoceros agrestis HOM05D007575 ORTHO05D009611 1.3e-28 132.1 446 29.6
SalBow5G2148 Salvia bowleyana HOM05D007575 ORTHO05D009611 1.3e-28 132.1 173 47.4
SalBow5G4021 Salvia bowleyana HOM05D007575 ORTHO05D009611 1.3e-28 132.1 173 47.4
Zm00001eb198990 Zea mays HOM05D007575 ORTHO05D009611 3.7e-28 130.6 221 37.6
BcaB06g29288 Brassica carinata HOM05D007575 ORTHO05D009611 4.0e-27 127.1 127 49.6
Lsat_1_v5_gn_5_138981 Lactuca sativa HOM05D007575 ORTHO05D009611 1.0e-25 122.5 339 33.3
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 9.3e-24 115.9 545 24.8
PGSC0003DMG400021612 Solanum tuberosum HOM05D007575 ORTHO05D009611 2.9e-17 94.4 76 60.5
SEGI_03248 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 1.4e-16 92.0 170 36.5
CBR_g123 Chara braunii HOM05D007575 ORTHO05D009611 6.5e-09 66.6 743 22.2
MBI08_g05086_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 1.4e-08 65.5 77 48.1
Sc22g0000260 Simmondsia chinensis HOM05D002884 ORTHO05D003178 7.2e-08 63.2 83 38.6
Sabra14G0056200 Salix brachista HOM05D002884 ORTHO05D003178 2.7e-07 61.2 81 39.5
Nn1g01376 Nelumbo nucifera HOM05D002884 ORTHO05D003178 7.9e-07 59.7 81 39.5
SalBow6G0746 Salvia bowleyana HOM05D002884 ORTHO05D003178 7.9e-07 59.7 83 36.1
Dinv37684 Davidia involucrata HOM05D002884 ORTHO05D003178 1.0e-06 59.3 83 36.1
Potri.014G075600 Populus trichocarpa HOM05D002884 ORTHO05D003178 1.0e-06 59.3 81 38.3
MSTRG.12015 Avicennia marina HOM05D002884 ORTHO05D003178 1.8e-06 58.5 83 36.1
HPP92_022610 Vanilla planifolia HOM05D002884 ORTHO05D003178 2.3e-06 58.2 83 36.1
CAN.G981.24 Capsicum annuum HOM05D002884 ORTHO05D003178 3.0e-06 57.8 83 34.9
CiPaw.12G097600 Carya illinoinensis HOM05D002884 ORTHO05D003178 3.0e-06 57.8 85 34.1
Gohir.A09G193001 Gossypium hirsutum HOM05D002884 ORTHO05D003178 3.0e-06 57.8 70 38.6
SGA_v2.0_scaffold144G35971 Striga asiatica HOM05D002884 ORTHO05D003178 3.0e-06 57.8 83 36.1
TAR636G2592 Trochodendron aralioides HOM05D002884 ORTHO05D003178 3.0e-06 57.8 83 36.1
Nn6g34230 Nelumbo nucifera HOM05D002884 ORTHO05D003178 3.9e-06 57.4 81 37.0
Sabra03G0086200 Salix brachista HOM05D002884 ORTHO05D003178 5.1e-06 57.0 94 33.0
VMungo1215G1054 Vigna mungo HOM05D002884 ORTHO05D003178 5.1e-06 57.0 70 35.7
CSS0004594 Camellia sinensis var. sinensis HOM05D002884 ORTHO05D003178 6.7e-06 56.6 83 34.9
Ciclev10019482m.g Citrus clementina HOM05D002884 ORTHO05D003178 6.7e-06 56.6 81 35.8
Gohir.D09G187200 Gossypium hirsutum HOM05D002884 ORTHO05D003178 6.7e-06 56.6 70 38.6
Gorai.006G210000 Gossypium raimondii HOM05D002884 ORTHO05D003178 6.7e-06 56.6 70 38.6
MBI04_g00304_MAGBIO Magnolia biondii HOM05D002884 ORTHO05D003178 6.7e-06 56.6 88 37.5
Sc01g0008750 Simmondsia chinensis HOM05D002884 ORTHO05D003178 6.7e-06 56.6 82 36.6
Actinidia14527 Actinidia chinensis HOM05D002884 ORTHO05D003178 8.8e-06 56.2 83 34.9
Lalb_Chr05g0225031 Lupinus albus HOM05D002884 ORTHO05D003178 8.8e-06 56.2 83 34.9


User provided reference genes

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