Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G018400 Populus trichocarpa HOM05D003822 ORTHO05D004484 1.3e-139 500.0 305 100.0
Sabra17G0014400 Salix brachista HOM05D000455 ORTHO05D000434 3.0e-112 409.1 305 83.9
Sabra17G0002300 Salix brachista HOM05D000455 ORTHO05D000434 4.7e-105 385.2 358 70.7
Sabra07G0108500 Salix brachista HOM05D003822 ORTHO05D004484 4.4e-103 378.6 305 73.4
Sabra07G0120800 Salix brachista HOM05D003822 ORTHO05D004484 4.4e-103 378.6 305 73.4
Glyma.15G027800 Glycine max HOM05D003822 ORTHO05D004484 8.1e-97 357.8 308 75.0
VMungo1080G0920 Vigna mungo HOM05D003822 ORTHO05D004484 5.2e-96 355.1 303 71.6
Eucgr.A00039 Eucalyptus grandis HOM05D003822 ORTHO05D004484 9.8e-95 350.9 317 68.1
Glyma.13G346400 Glycine max HOM05D003822 ORTHO05D004484 2.2e-94 349.7 312 72.4
Haze_01421 Corylus avellana HOM05D003822 ORTHO05D004484 3.7e-94 349.0 303 75.9
FAN18G3379 Fragaria x ananassa HOM05D003822 ORTHO05D004484 9.2e-93 344.4 325 70.8
FAN08G2486 Fragaria x ananassa HOM05D003822 ORTHO05D004484 3.9e-91 339.0 310 68.1
VMungo1127G1572 Vigna mungo HOM05D003822 ORTHO05D004484 1.1e-90 337.4 301 66.8
Prupe.1G200400 Prunus persica HOM05D003822 ORTHO05D004484 1.9e-90 336.7 324 64.5
Glyma.11G125400 Glycine max HOM05D003822 ORTHO05D004484 2.5e-90 336.3 301 67.4
QL10p052081 Quercus lobata HOM05D003822 ORTHO05D004484 3.3e-90 335.9 306 69.3
TPR.G6564 Trifolium pratense HOM05D003822 ORTHO05D004484 3.3e-90 335.9 313 66.1
Cfa015215 Carpinus fangiana HOM05D003822 ORTHO05D004484 9.5e-90 334.3 310 72.3
FAN04G1289 Fragaria x ananassa HOM05D003822 ORTHO05D004484 1.2e-89 334.0 319 70.2
COL.COLO4_29926 Corchorus olitorius HOM05D003822 ORTHO05D004484 1.4e-88 330.5 309 68.0
CiPaw.01G173700 Carya illinoinensis HOM05D003822 ORTHO05D004484 2.3e-88 329.7 313 71.9
Lalb_Chr24g0396641 Lupinus albus HOM05D003822 ORTHO05D004484 7.6e-87 324.7 320 67.5
Hma1.2p1_2403F.1_g321420 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 1.7e-86 323.6 322 68.0
Hma1.2p1_0635F.1_g193140 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 8.4e-86 321.2 324 65.4
arahy.Tifrunner.gnm1.ann1.0NAL6S Arachis hypogaea HOM05D003822 ORTHO05D004484 1.4e-85 320.5 314 71.3
Gorai.007G162100 Gossypium raimondii HOM05D003822 ORTHO05D004484 2.4e-85 319.7 298 66.4
Gohir.D11G153200 Gossypium hirsutum HOM05D003822 ORTHO05D004484 5.4e-85 318.5 298 66.4
Peaxi162Scf00995g00322 Petunia axillaris HOM05D003822 ORTHO05D004484 7.1e-85 318.2 308 63.3
Phvul.005G155400 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 7.1e-85 318.2 302 69.5
RcHm_v2.0_Chr7g0230961 Rosa chinensis HOM05D003822 ORTHO05D004484 7.1e-85 318.2 323 64.4
arahy.Tifrunner.gnm1.ann1.1KAH27 Arachis hypogaea HOM05D003822 ORTHO05D004484 9.2e-85 317.8 314 71.0
Nn7g37555 Nelumbo nucifera HOM05D003822 ORTHO05D004484 1.6e-84 317.0 306 66.3
TWI18G0659 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 2.1e-84 316.6 302 72.2
FvH4_5g32960 Fragaria vesca HOM05D003822 ORTHO05D004484 2.7e-84 316.2 316 68.0
RcHm_v2.0_Chr1g0340971 Rosa chinensis HOM05D003822 ORTHO05D004484 2.7e-84 316.2 314 62.1
Ciclev10021425m.g Citrus clementina HOM05D003822 ORTHO05D004484 4.6e-84 315.5 309 70.9
Medtr2g099360 Medicago truncatula HOM05D003822 ORTHO05D004484 4.6e-84 315.5 324 68.5
Gohir.A11G145000 Gossypium hirsutum HOM05D003822 ORTHO05D004484 1.3e-83 313.9 298 66.1
Nn1g09539 Nelumbo nucifera HOM05D003822 ORTHO05D004484 2.3e-83 313.2 306 68.0
MD04G1046700 Malus domestica HOM05D003822 ORTHO05D004484 3.9e-83 312.4 316 69.6
Manes.13G057600 Manihot esculenta HOM05D003822 ORTHO05D004484 8.6e-83 311.2 300 70.0
Ca_01239_v3 Cicer arietinum L. HOM05D003822 ORTHO05D004484 1.9e-82 310.1 307 64.8
Sc19g0002790 Simmondsia chinensis HOM05D003822 ORTHO05D004484 1.9e-82 310.1 314 62.7
CiPaw.02G103400 Carya illinoinensis HOM05D003822 ORTHO05D004484 4.3e-82 308.9 308 67.5
Lalb_Chr22g0352031 Lupinus albus HOM05D003822 ORTHO05D004484 4.3e-82 308.9 301 63.5
AUR62002363 Chenopodium quinoa HOM05D003822 ORTHO05D004484 7.3e-82 308.1 313 67.7
Ah.07g202460 Amaranthus hybridus HOM05D003822 ORTHO05D004484 2.1e-81 306.6 311 62.4
vmacro14674 Vaccinium macrocarpon HOM05D003822 ORTHO05D004484 2.8e-81 306.2 303 66.0
Thecc.01G205200 Theobroma cacao HOM05D003822 ORTHO05D004484 3.6e-81 305.8 300 70.0
TAR362G1102 Trochodendron aralioides HOM05D003822 ORTHO05D004484 3.6e-81 305.8 313 62.0
SGA_v2.0_scaffold77G25327 Striga asiatica HOM05D003822 ORTHO05D004484 1.1e-80 304.3 305 63.3
MELO3C017788.2 Cucumis melo HOM05D003822 ORTHO05D004484 4.0e-80 302.4 297 65.3
Duzib211G0255 Durio zibethinus HOM05D003822 ORTHO05D004484 8.9e-80 301.2 304 67.8
TWI36G1391 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 1.2e-79 300.8 314 62.7
TWI36G1709 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 1.2e-79 300.8 314 62.7
TAR633G2284 Trochodendron aralioides HOM05D003822 ORTHO05D004484 1.5e-79 300.4 296 66.9
Eucgr.H00681 Eucalyptus grandis HOM05D003822 ORTHO05D004484 5.8e-79 298.5 305 68.5
Cpa.g.sc8.23 Carica papaya HOM05D003822 ORTHO05D004484 4.9e-78 295.4 309 64.1
Sed0021377 Sechium edule HOM05D003822 ORTHO05D004484 4.9e-78 295.4 308 67.9
Cc02_g30690 Coffea canephora HOM05D003822 ORTHO05D004484 6.4e-78 295.0 302 65.9
Sabra14G0133100 Salix brachista HOM05D003822 ORTHO05D004484 8.4e-78 294.7 301 64.5
Oeu013421.2 Olea europaea HOM05D003822 ORTHO05D004484 2.4e-77 293.1 296 67.6
MSTRG.17947 Avicennia marina HOM05D003822 ORTHO05D004484 4.2e-77 292.4 306 62.1
Duzib133G0954 Durio zibethinus HOM05D003822 ORTHO05D004484 7.1e-77 291.6 306 67.3
PGR102G0947 Punica granatum HOM05D003822 ORTHO05D004484 7.1e-77 291.6 317 62.8
Lj3g0024368 Lotus japonicus HOM05D003822 ORTHO05D004484 4.6e-76 288.9 295 63.7
Lj3g0026330 Lotus japonicus HOM05D003822 ORTHO05D004484 1.0e-75 287.7 319 68.7
Ciclev10016105m.g Citrus clementina HOM05D003822 ORTHO05D004484 1.7e-75 287.0 305 65.9
Solyc06g007700.4 Solanum lycopersicum HOM05D003822 ORTHO05D004484 6.6e-75 285.0 306 63.1
Sed0005976 Sechium edule HOM05D003822 ORTHO05D004484 8.7e-75 284.6 297 69.7
Nitab4.5_0003952g0050 Nicotiana tabacum HOM05D003822 ORTHO05D004484 2.5e-74 283.1 310 61.0
Actinidia23132 Actinidia chinensis HOM05D003822 ORTHO05D004484 3.3e-74 282.7 311 55.6
Hund03185 Selenicereus undatus HOM05D003822 ORTHO05D004484 5.6e-74 282.0 308 58.1
Nitab4.5_0002641g0020 Nicotiana tabacum HOM05D003822 ORTHO05D004484 1.3e-73 280.8 308 64.0
EL10Ac3g06027 Beta vulgaris HOM05D003822 ORTHO05D004484 6.2e-73 278.5 308 60.7
Thhalv10021215m.g Eutrema salsugineum HOM05D003822 ORTHO05D004484 6.2e-73 278.5 316 63.0
AL3G18900 Arabidopsis lyrata HOM05D003822 ORTHO05D004484 1.1e-72 277.7 326 61.3
ECA236G4570 Erigeron canadensis HOM05D003822 ORTHO05D004484 1.1e-72 277.7 317 60.3
Actinidia34522 Actinidia chinensis HOM05D003822 ORTHO05D004484 1.8e-72 276.9 318 61.3
ECA248G1190 Erigeron canadensis HOM05D002050 ORTHO05D001949 1.8e-72 276.9 286 56.6
TAR365G1107 Trochodendron aralioides HOM05D003822 ORTHO05D004484 5.3e-72 275.4 289 65.1
Duzib138G1354 Durio zibethinus HOM05D003822 ORTHO05D004484 6.9e-72 275.0 298 68.8
THA.LOC104819024 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 9.0e-72 274.6 308 60.7
Manes.12G057507 Manihot esculenta HOM05D003822 ORTHO05D004484 1.2e-71 274.2 294 70.7
Manes.12G057905 Manihot esculenta HOM05D003822 ORTHO05D004484 1.2e-71 274.2 294 70.7
HPP92_015668 Vanilla planifolia HOM05D003822 ORTHO05D004484 1.2e-71 274.2 303 64.7
AT3G07560 Arabidopsis thaliana HOM05D003822 ORTHO05D004484 3.4e-71 272.7 309 63.1
THA.LOC104822456 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 3.4e-71 272.7 307 59.3
Manes.12G058903 Manihot esculenta HOM05D003822 ORTHO05D004484 5.8e-71 271.9 307 68.1
Carub.0003s0711 Capsella rubella HOM05D003822 ORTHO05D004484 1.3e-70 270.8 308 66.6
PSO017G3256 Papaver somniferum HOM05D003822 ORTHO05D004484 1.3e-70 270.8 318 62.9
CsaV3_4G002560 Cucumis sativus L. HOM05D003822 ORTHO05D004484 1.7e-70 270.4 300 66.3
PSO837G0022 Papaver somniferum HOM05D003822 ORTHO05D004484 1.7e-70 270.4 318 62.9
Sp3g06480 Schrenkiella parvula HOM05D003822 ORTHO05D004484 2.9e-70 269.6 305 63.3
Sopen06g002590 Solanum pennellii HOM05D003822 ORTHO05D004484 1.1e-69 267.7 314 62.1
Atru.chr6.3488 Acer truncatum HOM05D003822 ORTHO05D004484 1.4e-69 267.3 307 65.8
Aqoxy2G04159 Aquilegia oxysepala HOM05D003822 ORTHO05D004484 1.9e-69 266.9 303 60.4
CANSAT11G1915 Cannabis sativa HOM05D003822 ORTHO05D004484 3.2e-69 266.2 316 66.8
BcaB03g14694 Brassica carinata HOM05D003822 ORTHO05D004484 7.1e-69 265.0 310 64.5
CANSAT56G4141 Cannabis sativa HOM05D003822 ORTHO05D004484 1.6e-68 263.8 329 64.7
Lsat_1_v5_gn_8_98601 Lactuca sativa HOM05D003822 ORTHO05D004484 1.6e-68 263.8 319 60.5
Peaxi162Scf00372g00722 Petunia axillaris HOM05D003822 ORTHO05D004484 1.6e-68 263.8 306 59.8
BraA05t22796Z Brassica rapa HOM05D003822 ORTHO05D004484 2.7e-68 263.1 317 60.3
CSS0026869 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 3.5e-68 262.7 294 67.7
A05p40650 Brassica napus HOM05D003822 ORTHO05D004484 6.0e-68 261.9 305 60.7
HanXRQChr10g0281191 Helianthus annuus HOM05D003822 ORTHO05D004484 1.3e-67 260.8 304 54.3
MBI02_g24302_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 3.0e-67 259.6 305 63.0
Dinv28779 Davidia involucrata HOM05D003822 ORTHO05D004484 3.9e-67 259.2 293 61.4
MD00G1127600 Malus domestica HOM05D003822 ORTHO05D004484 5.1e-67 258.8 306 61.8
Manes.11G127100 Manihot esculenta HOM05D003822 ORTHO05D004484 3.3e-66 256.1 270 61.9
PGR083G0513 Punica granatum HOM05D003822 ORTHO05D004484 5.6e-66 255.4 310 61.0
HanXRQChr01g0010521 Helianthus annuus HOM05D003822 ORTHO05D004484 9.6e-66 254.6 311 62.1
Potri.014G197200 Populus trichocarpa HOM05D003822 ORTHO05D004484 3.7e-65 252.7 307 63.2
ClCG07G011660 Citrullus lanatus HOM05D003822 ORTHO05D004484 6.2e-65 251.9 398 48.7
Aa31LG5G18100 Aethionema arabicum HOM05D003822 ORTHO05D004484 1.4e-64 250.8 318 62.9
C03p42940 Brassica napus HOM05D003822 ORTHO05D004484 1.8e-64 250.4 314 59.6
BcaC01g04277 Brassica carinata HOM05D003822 ORTHO05D004484 5.3e-64 248.8 310 59.7
CDE02G4798 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 6.9e-64 248.4 299 64.2
CDE05G3137 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 1.2e-63 247.7 296 57.1
A03p35330 Brassica napus HOM05D003822 ORTHO05D004484 9.9e-63 244.6 308 63.3
unitig_22.g5196 Utricularia gibba HOM05D003822 ORTHO05D004484 9.9e-63 244.6 305 55.4
PGSC0003DMG400020658 Solanum tuberosum HOM05D003822 ORTHO05D004484 2.4e-61 240.0 306 55.9
C05p59760 Brassica napus HOM05D003822 ORTHO05D004484 3.2e-61 239.6 299 59.9
AUR62023822 Chenopodium quinoa HOM05D003822 ORTHO05D004484 5.5e-61 238.8 305 52.5
BolC3t16562H Brassica oleracea HOM05D003822 ORTHO05D004484 9.3e-61 238.0 302 63.2
BolC5t34630H Brassica oleracea HOM05D003822 ORTHO05D004484 2.7e-60 236.5 319 59.2
CAN.G181.49 Capsicum annuum HOM05D003822 ORTHO05D004484 1.8e-59 233.8 304 57.6
Phvul.011G052000 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 5.6e-58 228.8 219 67.6
ATR0752G090 Amborella trichopoda HOM05D003822 ORTHO05D004484 2.1e-57 226.9 304 60.2
BcaB04g21287 Brassica carinata HOM05D003822 ORTHO05D004484 6.2e-57 225.3 303 54.8
Zm00001eb117520 Zea mays HOM05D003822 ORTHO05D004484 1.4e-56 224.2 302 55.0
BcaC05g29550 Brassica carinata HOM05D003822 ORTHO05D004484 6.9e-56 221.9 304 56.9
Zm00001eb059960 Zea mays HOM05D003822 ORTHO05D004484 1.5e-55 220.7 315 48.6
Os07g0152800 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 3.4e-55 219.5 296 58.8
Os03g0786000 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 5.8e-55 218.8 301 52.2
SEGI_01562 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 1.7e-54 217.2 318 51.9
CSS0006211 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 2.5e-53 213.4 225 64.0
SGA_v2.0_scaffold95G28678 Striga asiatica HOM05D003822 ORTHO05D004484 9.3e-53 211.5 238 60.1
Lsat_1_v5_gn_5_175601 Lactuca sativa HOM05D003822 ORTHO05D004484 2.7e-52 209.9 300 54.7
SEGI_07594 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 2.3e-51 206.8 315 53.3
Migut.N00690 Erythranthe guttata HOM05D003822 ORTHO05D004484 3.0e-51 206.5 316 57.0
Oeu020438.1 Olea europaea HOM05D003822 ORTHO05D004484 4.5e-47 192.6 219 66.2
BolC1t05546H Brassica oleracea HOM05D003822 ORTHO05D004484 6.5e-46 188.7 247 60.7
Gorai.N001500 Gossypium raimondii HOM05D003822 ORTHO05D004484 8.5e-46 188.3 299 52.2
PGSC0003DMG400020552 Solanum tuberosum HOM05D003822 ORTHO05D004484 3.2e-45 186.4 216 63.0
Actinidia11655 Actinidia chinensis HOM05D003822 ORTHO05D004484 1.2e-44 184.5 226 63.3
Lj2C1109G11 Lonicera japonica HOM05D003822 ORTHO05D004484 1.0e-43 181.4 296 54.1
Psat5g291600 Pisum sativum HOM05D003822 ORTHO05D004484 2.5e-42 176.8 246 61.4
MBI18_g24478_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 2.8e-41 173.3 281 50.5
BraA01t04376Z Brassica rapa HOM05D003822 ORTHO05D004484 8.2e-41 171.8 135 65.9
Manes.12G058104 Manihot esculenta HOM05D003822 ORTHO05D004484 9.4e-37 158.3 99 79.8
AagrBONN_evm.TU.Sc2ySwM_368.3329 Anthoceros agrestis HOM05D003822 ORTHO05D004484 5.7e-34 149.1 307 47.9
SMO146G0020 Selaginella moellendorffii HOM05D003822 ORTHO05D004484 1.3e-33 147.9 309 46.0
Pp3c11_19790 Physcomitrium patens HOM05D003822 ORTHO05D004484 1.1e-32 144.8 299 49.2
MSTRG.12733 Avicennia marina HOM05D003822 ORTHO05D004484 1.4e-32 144.4 211 53.6
Mapoly0080s0067 Marchantia polymorpha HOM05D003822 ORTHO05D004484 1.0e-30 138.3 323 51.1
FAN01G1095 Fragaria x ananassa HOM05D003822 ORTHO05D004484 8.5e-30 135.2 273 46.9
MSTRG.12731 Avicennia marina HOM05D003822 ORTHO05D004484 1.1e-29 134.8 100 64.0
CBR_g38951 Chara braunii HOM05D003822 ORTHO05D004484 7.2e-29 132.1 338 47.3
unitig_8.g3681 Utricularia gibba HOM05D003822 ORTHO05D004484 3.3e-26 123.2 140 59.3
CARHR082240 Cardamine hirsuta HOM05D003822 ORTHO05D004484 1.1e-24 118.2 198 62.1
CSS0030404 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 4.1e-24 116.3 89 69.7
Gohir.A07G157900 Gossypium hirsutum HOM05D003822 ORTHO05D004484 1.1e-21 108.2 111 58.6
FAN06G0586 Fragaria x ananassa HOM05D003822 ORTHO05D004484 1.5e-21 107.8 98 63.3
Atru.chr4.1339 Acer truncatum HOM05D003822 ORTHO05D004484 1.6e-20 104.4 87 66.7
Oeu020439.1 Olea europaea HOM05D003822 ORTHO05D004484 4.0e-19 99.8 78 66.7
Thecc.04G171800 Theobroma cacao HOM05D003822 ORTHO05D004484 3.3e-18 96.7 62 69.4
Hma1.2p1_0161F.1_g071790 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 7.5e-18 95.5 186 39.8
CARHR082220 Cardamine hirsuta HOM05D003822 ORTHO05D004484 1.3e-17 94.7 111 51.4
FvH4_7g08180 Fragaria vesca HOM05D003822 ORTHO05D046505 1.1e-16 91.7 78 64.1
Sabra06G0076200 Salix brachista HOM05D003822 ORTHO05D349384 2.4e-16 90.5 88 60.2
FAN10G3558 Fragaria x ananassa HOM05D003822 ORTHO05D046505 4.1e-16 89.7 306 31.4
Cre13.g574700 Chlamydomonas reinhardtii HOM05D003822 ORTHO05D004484 2.0e-15 87.4 64 62.5
Eucgr.C02476 Eucalyptus grandis HOM05D003822 ORTHO05D004484 2.9e-14 83.6 63 66.7
MCO15G241 Micromonas commoda HOM05D003822 ORTHO05D004484 3.8e-14 83.2 297 45.1
Eucgr.B03613 Eucalyptus grandis HOM05D003822 ORTHO05D004484 1.5e-13 81.3 66 65.2
CBR_g50337 Chara braunii HOM05D003822 ORTHO05D004484 5.2e-11 72.8 276 43.5
FAN01G2016 Fragaria x ananassa HOM05D003822 ORTHO05D004484 8.8e-11 72.0 44 81.8
ATR0737G020 Amborella trichopoda HOM05D003822 ORTHO05D004484 2.2e-09 67.4 76 50.0
FAN06G2565 Fragaria x ananassa HOM05D003822 ORTHO05D001690 3.1e-08 63.5 80 48.8
SEGI_40649 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 5.4e-08 62.8 104 46.2
SEGI_02285 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 1.6e-07 61.2 124 37.9


User provided reference genes

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