Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 4.1e-284 980.7 488 100.0
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 4.6e-235 817.8 429 94.9
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 4.2e-204 714.9 466 76.2
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 1.9e-196 689.5 464 73.1
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 1.3e-194 683.3 464 72.2
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 2.3e-194 682.6 465 72.3
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 5.6e-193 677.9 453 73.1
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 2.1e-192 676.0 441 74.4
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 1.4e-191 673.3 467 70.9
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 2.9e-189 665.6 461 71.8
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 2.4e-188 662.5 432 74.1
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 5.5e-188 661.4 464 71.6
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 9.3e-188 660.6 464 70.3
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 1.6e-187 659.8 464 70.5
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 9.6e-185 650.6 467 67.9
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 6.9e-183 644.4 461 69.8
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 6.9e-183 644.4 460 68.9
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 9.0e-183 644.0 442 71.3
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 1.5e-182 643.3 486 66.7
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 5.8e-182 641.3 486 66.3
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 2.2e-181 639.4 466 69.3
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 7.1e-180 634.4 466 68.9
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 1.3e-178 630.2 438 69.2
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 3.9e-178 628.6 472 66.5
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 1.9e-177 626.3 464 66.2
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 1.6e-176 623.2 447 67.6
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 3.7e-176 622.1 438 68.0
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 6.3e-176 621.3 454 68.3
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 1.5e-174 616.7 447 66.7
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 1.5e-174 616.7 430 70.2
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 2.2e-173 612.8 484 63.2
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 5.0e-173 611.7 457 66.3
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 5.0e-173 611.7 448 66.3
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 6.5e-173 611.3 445 68.5
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 1.6e-171 606.7 464 64.2
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 2.1e-171 606.3 433 68.1
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 1.8e-170 603.2 484 63.4
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 8.7e-170 600.9 457 64.8
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 5.7e-169 598.2 440 67.0
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 2.6e-166 589.3 433 66.7
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 2.6e-166 589.3 441 65.3
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 2.6e-166 589.3 460 63.9
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 7.7e-166 587.8 441 64.9
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 3.8e-165 585.5 464 62.9
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 2.5e-164 582.8 446 66.4
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 3.2e-164 582.4 431 66.1
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 2.1e-163 579.7 460 62.2
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 2.1e-163 579.7 444 64.6
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 2.7e-163 579.3 461 62.3
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 7.9e-163 577.8 446 64.6
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 8.8e-162 574.3 460 62.6
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 7.4e-161 571.2 463 61.8
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 3.7e-160 568.9 444 65.3
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 5.3e-159 565.1 436 64.0
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 6.9e-159 564.7 461 60.7
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 1.2e-158 563.9 454 62.8
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 4.5e-158 562.0 436 64.2
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 5.9e-158 561.6 462 62.6
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 1.1e-156 557.4 437 64.1
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 1.4e-156 557.0 462 60.6
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 2.7e-155 552.7 448 61.8
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 3.6e-155 552.4 472 60.8
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 4.7e-155 552.0 462 60.0
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 1.0e-154 550.8 469 61.2
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 1.0e-154 550.8 435 63.2
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 3.0e-154 549.3 469 60.6
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 2.0e-153 546.6 412 64.3
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 2.0e-153 546.6 451 62.3
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 1.7e-152 543.5 443 63.0
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 1.7e-152 543.5 412 64.3
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 3.7e-152 542.3 452 62.2
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 1.4e-151 540.4 452 62.2
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 3.5e-150 535.8 398 66.6
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 5.9e-150 535.0 486 58.6
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 7.7e-150 534.6 446 61.4
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 8.8e-146 521.2 356 70.8
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 5.3e-143 511.9 468 57.1
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 5.3e-143 511.9 496 55.4
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 7.0e-143 511.5 472 57.2
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 3.7e-136 489.2 432 55.6
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.4e-135 487.3 452 58.4
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 4.1e-135 485.7 433 55.2
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 8.0e-131 471.5 335 68.7
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 1.0e-130 471.1 432 54.6
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 2.2e-128 463.4 441 54.0
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 1.6e-126 457.2 319 69.0
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 2.7e-126 456.4 746 38.7
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 2.1e-123 446.8 317 69.7
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 3.7e-120 436.0 332 64.8
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 2.7e-118 429.9 377 59.9
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 1.3e-117 427.6 444 49.3
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 4.4e-113 412.5 330 61.2
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 2.6e-105 386.7 316 62.0
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 3.4e-105 386.3 364 53.3
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 9.8e-105 384.8 317 60.9
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 3.7e-104 382.9 315 61.6
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 3.2e-103 379.8 369 49.1
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 4.1e-103 379.4 450 47.3
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 2.1e-102 377.1 312 59.3
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 2.3e-98 363.6 401 47.1
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 2.3e-93 347.1 400 49.2
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 1.8e-90 337.4 232 69.8
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 7.3e-84 315.5 245 66.5
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 6.2e-83 312.4 349 49.6
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 1.9e-76 290.8 216 65.3
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 6.9e-74 282.3 216 66.2
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 2.7e-70 270.4 445 39.1
Psat4g200480 Pisum sativum HOM05D005800 ORTHO05D007636 3.9e-69 266.5 171 70.8
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 8.1e-67 258.8 217 61.3
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 1.3e-56 224.9 213 56.8
RcHm_v2.0_Chr2g0157711 Rosa chinensis HOM05D005800 ORTHO05D007636 8.2e-51 205.7 147 70.1
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 2.1e-46 191.0 135 67.4
Lalb_Chr07g0194261 Lupinus albus HOM05D005800 ORTHO05D007636 4.8e-43 179.9 145 64.1
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 6.3e-43 179.5 232 42.2
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.5e-41 174.9 168 53.0
Psat4g200520 Pisum sativum HOM05D010125 ORTHO05D007636 6.5e-40 169.5 136 64.0
Psat4g200320 Pisum sativum HOM05D005800 ORTHO05D007636 4.1e-34 150.2 133 60.2
HanXRQChr14g0429271 Helianthus annuus HOM05D005800 ORTHO05D007636 7.2e-31 139.4 98 67.3
CBR_g34007 Chara braunii HOM05D005800 ORTHO05D007636 4.2e-23 113.6 106 48.1
Mapoly0062s0088 Marchantia polymorpha HOM05D005800 ORTHO05D026664 1.0e-21 109.0 402 22.4
PRCOL_00005284 Prasinoderma coloniale HOM05D001546 ORTHO05D002908 2.0e-20 104.8 373 24.4
ATR1128G087 Amborella trichopoda HOM05D005800 ORTHO05D007636 5.7e-20 103.2 75 68.0
Pp3c17_14860 Physcomitrium patens HOM05D005800 ORTHO05D026664 4.8e-19 100.1 390 24.4
unitig_46.g18725 Utricularia gibba HOM05D005800 ORTHO05D007636 8.3e-19 99.4 139 44.6
COL.COLO4_04206 Corchorus olitorius HOM05D005800 ORTHO05D007636 7.7e-17 92.8 96 58.3
AagrBONN_evm.TU.Sc2ySwM_344.931 Anthoceros agrestis HOM05D005800 ORTHO05D026664 3.1e-10 70.9 388 23.2
COL.COLO4_04205 Corchorus olitorius HOM05D005800 ORTHO05D007636 1.1e-07 62.4 40 72.5


User provided reference genes

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