Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G061800 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.3e-80 303.1 162 100.0
Potri.014G065250 Populus trichocarpa HOM05D008789 ORTHO05D010785 7.1e-68 260.8 165 85.5
Potri.014G065600 Populus trichocarpa HOM05D008789 ORTHO05D010785 9.3e-68 260.4 166 86.1
Potri.014G065900 Populus trichocarpa HOM05D008789 ORTHO05D010785 2.7e-67 258.8 165 85.5
Potri.014G061500 Populus trichocarpa HOM05D008789 ORTHO05D010785 8.7e-58 227.3 165 75.8
Potri.014G065100 Populus trichocarpa HOM05D008789 ORTHO05D010785 9.6e-57 223.8 165 75.2
Sabra14G0045300 Salix brachista HOM05D008789 ORTHO05D010785 1.0e-53 213.8 176 68.8
Sabra13G0031000 Salix brachista HOM05D008789 ORTHO05D010785 2.5e-49 199.1 161 70.2
Sabra13G0031400 Salix brachista HOM05D008789 ORTHO05D010785 1.3e-48 196.8 158 69.0
Sabra13G0031200 Salix brachista HOM05D008789 ORTHO05D010785 4.1e-47 191.8 161 67.1
Potri.001G407500 Populus trichocarpa HOM05D008789 ORTHO05D010785 7.9e-43 177.6 164 59.8
Potri.001G407401 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.4e-42 176.8 164 59.8
Potri.006G095200 Populus trichocarpa HOM05D008789 ORTHO05D010785 2.9e-37 159.1 152 57.9
Sabra14G0045800 Salix brachista HOM05D008789 ORTHO05D010785 2.5e-36 156.0 159 54.7
Sabra16G0267600 Salix brachista HOM05D008789 ORTHO05D010785 3.2e-36 155.6 157 56.1
Sabra16G0269400 Salix brachista HOM05D008789 ORTHO05D010785 5.5e-36 154.8 157 56.1
Potri.006G095100 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.6e-35 153.3 155 56.8
Potri.014G064900 Populus trichocarpa HOM05D008789 ORTHO05D010785 2.3e-34 149.4 164 50.0
Sabra16G0267200 Salix brachista HOM05D008789 ORTHO05D010785 3.9e-34 148.7 148 56.8
Sabra16G0269100 Salix brachista HOM05D008789 ORTHO05D010785 2.0e-33 146.4 148 56.1
Sabra16G0268800 Salix brachista HOM05D008789 ORTHO05D010785 5.7e-33 144.8 148 54.1
Sabra16G0271000 Salix brachista HOM05D008789 ORTHO05D010785 5.7e-33 144.8 148 54.1
Potri.014G065700 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.7e-32 143.3 144 54.9
Sabra13G0030900 Salix brachista HOM05D008789 ORTHO05D010785 9.1e-31 137.5 119 68.9
Sabra13G0031900 Salix brachista HOM05D008789 ORTHO05D010785 7.2e-28 127.9 186 45.7
Potri.014G065200 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.6e-27 126.7 165 48.5
Potri.014G065000 Populus trichocarpa HOM05D008789 ORTHO05D010785 2.3e-26 122.9 108 60.2
Potri.014G061700 Populus trichocarpa HOM05D008789 ORTHO05D010785 3.0e-26 122.5 108 60.2
Potri.014G061600 Populus trichocarpa HOM05D008789 ORTHO05D010785 2.6e-25 119.4 101 64.4
Potri.014G063350 Populus trichocarpa HOM05D008789 ORTHO05D010785 3.3e-25 119.0 160 48.1
Sabra06G0073100 Salix brachista HOM05D000076 ORTHO05D001377 1.3e-24 117.1 139 51.8
Sabra13G0031600 Salix brachista HOM05D008789 ORTHO05D010785 1.3e-24 117.1 82 75.6
Potri.014G065300 Populus trichocarpa HOM05D008789 ORTHO05D010785 2.2e-24 116.3 100 65.0
Sabra14G0045400 Salix brachista HOM05D008789 ORTHO05D010785 1.1e-23 114.0 165 44.8
Potri.014G065500 Populus trichocarpa HOM05D008789 ORTHO05D010785 2.4e-23 112.8 102 57.8
Sabra14G0045600 Salix brachista HOM05D008789 ORTHO05D010785 4.1e-23 112.1 165 45.5
Sabra14G0045900 Salix brachista HOM05D008789 ORTHO05D010785 8.5e-21 104.4 93 59.1
Sabra14G0045500 Salix brachista HOM05D008789 ORTHO05D010785 3.2e-20 102.4 93 58.1
Potri.014G065951 Populus trichocarpa HOM05D008789 ORTHO05D010785 7.0e-15 84.7 84 56.0
Manes.10G145500 Manihot esculenta HOM05D008789 ORTHO05D010785 5.9e-14 81.6 133 33.1
Manes.05G049300 Manihot esculenta HOM05D008789 ORTHO05D010785 1.0e-13 80.9 157 34.4
Thecc.10G017700 Theobroma cacao HOM05D009631 ORTHO05D011824 8.0e-11 71.2 139 30.2
Ciclev10013523m.g Citrus clementina HOM05D019503 ORTHO05D010785 2.3e-10 69.7 138 34.1
Thecc.10G017200 Theobroma cacao HOM05D009631 ORTHO05D011824 7.5e-09 64.7 122 30.3
Thecc.10G017000 Theobroma cacao HOM05D009631 ORTHO05D011824 1.3e-08 63.9 122 28.7
Gorai.011G287100 Gossypium raimondii HOM05D009631 ORTHO05D011824 3.7e-08 62.4 124 31.5
Thecc.01G384000 Theobroma cacao HOM05D019503 ORTHO05D010785 8.3e-08 61.2 139 28.1
arahy.Tifrunner.gnm1.ann1.R8WE5X Arachis hypogaea HOM05D019503 ORTHO05D010785 1.1e-07 60.8 140 26.4
Thecc.06G016000 Theobroma cacao HOM05D009631 ORTHO05D011824 1.1e-07 60.8 138 29.0
Gorai.011G287400 Gossypium raimondii HOM05D009631 ORTHO05D011824 1.8e-07 60.1 124 29.8
arahy.Tifrunner.gnm1.ann1.3M5ES5 Arachis hypogaea HOM05D019503 ORTHO05D010785 2.4e-07 59.7 140 26.4
Manes.07G065686 Manihot esculenta HOM05D008789 ORTHO05D010785 2.4e-07 59.7 96 38.5
COL.COLO4_09669 Corchorus olitorius HOM05D019273 ORTHO05D020506 4.1e-07 58.9 118 33.1
Gorai.011G287000 Gossypium raimondii HOM05D009631 ORTHO05D011824 1.2e-06 57.4 107 32.7
Gorai.011G287200 Gossypium raimondii HOM05D009631 ORTHO05D011824 1.2e-06 57.4 106 31.1
QL07p007766 Quercus lobata HOM05D014023 ORTHO05D011719 1.2e-06 57.4 123 31.7
Gohir.D10G248725 Gossypium hirsutum HOM05D009631 ORTHO05D011824 3.5e-06 55.8 115 31.3
Gorai.011G287300 Gossypium raimondii HOM05D009631 ORTHO05D011824 3.5e-06 55.8 106 30.2
Gorai.011G287500 Gossypium raimondii HOM05D009631 ORTHO05D011824 3.5e-06 55.8 106 30.2
Thecc.01G384100 Theobroma cacao HOM05D019503 ORTHO05D010785 3.5e-06 55.8 106 32.1
Gohir.D10G101450 Gossypium hirsutum HOM05D009631 ORTHO05D011824 4.5e-06 55.5 149 27.5
Gorai.011G288800 Gossypium raimondii HOM05D009631 ORTHO05D011824 4.5e-06 55.5 115 31.3
Gohir.D10G248750 Gossypium hirsutum HOM05D009631 ORTHO05D011824 5.9e-06 55.1 115 30.4


User provided reference genes

Program Settings