Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G124100 Populus trichocarpa HOM05D007320 ORTHO05D009290 2.4e-166 589.0 342 100.0
Sabra13G0103100 Salix brachista HOM05D007320 ORTHO05D009290 2.1e-154 549.3 342 94.2
TWI59G0750 Tripterygium wilfordii HOM05D007320 ORTHO05D009290 3.9e-100 369.0 338 58.9
Ciclev10017507m.g Citrus clementina HOM05D007320 ORTHO05D009290 5.3e-97 358.6 340 56.5
Dinv15897 Davidia involucrata HOM05D007320 ORTHO05D009290 4.5e-96 355.5 345 65.5
Manes.13G139600 Manihot esculenta HOM05D007320 ORTHO05D009290 7.6e-96 354.8 338 62.1
GSVIVG01020656001 Vitis vinifera HOM05D007320 ORTHO05D009290 3.2e-94 349.4 340 64.4
Lalb_Chr25g0279081 Lupinus albus HOM05D007320 ORTHO05D009290 5.5e-94 348.6 333 62.2
Atru.chr6.2840 Acer truncatum HOM05D007320 ORTHO05D009290 9.3e-94 347.8 340 56.2
Prupe.3G125800 Prunus persica HOM05D007320 ORTHO05D009290 1.2e-93 347.4 340 65.6
Haze_13306 Corylus avellana HOM05D007320 ORTHO05D009290 3.0e-92 342.8 338 64.2
CiPaw.04G130300 Carya illinoinensis HOM05D007320 ORTHO05D009290 5.1e-92 342.0 344 55.5
Ca_01474_v3 Cicer arietinum L. HOM05D007320 ORTHO05D009290 1.1e-91 340.9 320 60.0
CANSAT64G2476 Cannabis sativa HOM05D007320 ORTHO05D009290 1.5e-91 340.5 341 64.2
Cfa014690 Carpinus fangiana HOM05D007320 ORTHO05D009290 1.9e-91 340.1 340 63.8
Glyma.12G208100 Glycine max HOM05D007320 ORTHO05D009290 4.3e-91 339.0 311 57.2
MD09G1241100 Malus domestica HOM05D007320 ORTHO05D009290 5.7e-91 338.6 338 64.8
FAN10G1335 Fragaria x ananassa HOM05D007320 ORTHO05D009290 9.7e-91 337.8 345 62.3
Lj3g0010689 Lotus japonicus HOM05D007320 ORTHO05D009290 9.7e-91 337.8 333 62.5
Psat5g275040 Pisum sativum HOM05D007320 ORTHO05D009290 1.1e-89 334.3 336 64.0
FAN10G4046 Fragaria x ananassa HOM05D007320 ORTHO05D009290 1.8e-89 333.6 345 61.7
RcHm_v2.0_Chr0c20g0500221 Rosa chinensis HOM05D007320 ORTHO05D009290 5.3e-89 332.0 345 59.7
Thecc.08G174300 Theobroma cacao HOM05D007320 ORTHO05D009290 6.9e-89 331.6 345 63.8
Phvul.005G098950 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 9.1e-89 331.3 311 55.6
FvH4_7g08410 Fragaria vesca HOM05D007320 ORTHO05D009290 1.2e-88 330.9 345 60.9
ClCG02G009070 Citrullus lanatus HOM05D007320 ORTHO05D009290 1.5e-88 330.5 337 53.4
Medtr2g090885 Medicago truncatula HOM05D007320 ORTHO05D009290 2.0e-88 330.1 341 59.5
vmacro12358 Vaccinium macrocarpon HOM05D007320 ORTHO05D009290 2.0e-88 330.1 344 59.3
Rhsim06G0135200 Rhododendron simsii HOM05D007320 ORTHO05D009290 2.6e-88 329.7 344 59.6
FAN03G0990 Fragaria x ananassa HOM05D007320 ORTHO05D009290 4.5e-88 328.9 341 60.7
CsaV3_2G004500 Cucumis sativus L. HOM05D007320 ORTHO05D009290 7.7e-88 328.2 340 52.1
Nitab4.5_0001895g0020 Nicotiana tabacum HOM05D007320 ORTHO05D009290 1.7e-87 327.0 298 57.0
VMungo1080G0443 Vigna mungo HOM05D007320 ORTHO05D009290 1.7e-87 327.0 312 56.4
Lj1P690T28 Lonicera japonica HOM05D007320 ORTHO05D009290 3.8e-87 325.9 339 61.7
TAR627G0001 Trochodendron aralioides HOM05D007320 ORTHO05D009290 6.5e-87 325.1 347 63.1
COL.COLO4_26851 Corchorus olitorius HOM05D007320 ORTHO05D009290 1.1e-86 324.3 345 57.7
Cpa.g.sc209.6 Carica papaya HOM05D007320 ORTHO05D009290 1.9e-86 323.6 336 53.3
Hma1.2p1_0002F.1_g002500 Hydrangea macrophylla HOM05D007320 ORTHO05D009290 1.9e-86 323.6 347 61.7
Actinidia11122 Actinidia chinensis HOM05D007320 ORTHO05D009290 9.4e-86 321.2 344 50.9
Hund07849 Selenicereus undatus HOM05D007320 ORTHO05D009290 1.2e-85 320.9 329 50.8
TPR.G6440 Trifolium pratense HOM05D007320 ORTHO05D009290 1.2e-85 320.9 317 64.7
Dinv19981 Davidia involucrata HOM05D007320 ORTHO05D009290 2.7e-85 319.7 305 67.9
CSS0012636 Camellia sinensis var. sinensis HOM05D007320 ORTHO05D009290 3.6e-85 319.3 345 60.6
Sed0016711 Sechium edule HOM05D007320 ORTHO05D009290 6.1e-85 318.5 320 61.6
THA.LOC104800856 Tarenaya hassleriana HOM05D007320 ORTHO05D009290 7.9e-85 318.2 342 60.8
Cc05_g07980 Coffea canephora HOM05D007320 ORTHO05D009290 1.8e-84 317.0 344 50.0
Gorai.009G266400 Gossypium raimondii HOM05D007320 ORTHO05D009290 1.8e-84 317.0 339 53.1
CAN.G756.7 Capsicum annuum HOM05D007320 ORTHO05D009290 2.3e-84 316.6 328 52.4
Gohir.D05G254900 Gossypium hirsutum HOM05D007320 ORTHO05D009290 2.3e-84 316.6 339 52.8
Gohir.A05G253000 Gossypium hirsutum HOM05D007320 ORTHO05D009290 6.7e-84 315.1 339 52.8
Sopen01g035350 Solanum pennellii HOM05D007320 ORTHO05D009290 1.1e-83 314.3 320 51.9
Nitab4.5_0008210g0010 Nicotiana tabacum HOM05D007320 ORTHO05D009290 1.5e-83 313.9 336 52.1
Solyc01g088490.3 Solanum lycopersicum HOM05D007320 ORTHO05D009290 4.4e-83 312.4 321 51.4
PGSC0003DMG400001712 Solanum tuberosum HOM05D007320 ORTHO05D009290 2.2e-82 310.1 320 51.2
Nn3g20750 Nelumbo nucifera HOM05D007320 ORTHO05D009290 1.4e-81 307.4 351 51.3
Aa31LG1G7290 Aethionema arabicum HOM05D007320 ORTHO05D009290 1.8e-81 307.0 321 61.1
EL10Ac2g02568 Beta vulgaris HOM05D007320 ORTHO05D009290 6.9e-81 305.1 315 61.0
Carub.0001s0564 Capsella rubella HOM05D007320 ORTHO05D009290 9.1e-81 304.7 342 60.8
AT1G06270 Arabidopsis thaliana HOM05D007320 ORTHO05D009290 2.0e-80 303.5 321 63.2
Thhalv10008110m.g Eutrema salsugineum HOM05D007320 ORTHO05D009290 3.4e-80 302.8 321 63.2
Oeu000571.1 Olea europaea HOM05D007320 ORTHO05D009290 5.9e-80 302.0 341 55.1
BcaB02g06809 Brassica carinata HOM05D007320 ORTHO05D009290 7.7e-80 301.6 330 61.8
AUR62035379 Chenopodium quinoa HOM05D007320 ORTHO05D009290 1.7e-79 300.4 315 60.6
AL1G16280 Arabidopsis lyrata HOM05D007320 ORTHO05D009290 5.0e-79 298.9 321 62.6
CARHR005830 Cardamine hirsuta HOM05D007320 ORTHO05D009290 5.0e-79 298.9 330 60.3
Sp1g05080 Schrenkiella parvula HOM05D007320 ORTHO05D009290 6.5e-79 298.5 321 62.6
Sc07g0005270 Simmondsia chinensis HOM05D007320 ORTHO05D009290 1.4e-78 297.4 334 60.5
C05p04580 Brassica napus HOM05D007320 ORTHO05D009290 1.0e-76 291.2 331 60.4
BolC5t29229H Brassica oleracea HOM05D007320 ORTHO05D009290 1.0e-76 291.2 331 60.4
MSTRG.20317 Avicennia marina HOM05D007320 ORTHO05D009290 6.7e-76 288.5 317 49.2
SalBow8G4737 Salvia bowleyana HOM05D007320 ORTHO05D009290 8.8e-76 288.1 325 48.9
BcaC05g24288 Brassica carinata HOM05D007320 ORTHO05D009290 1.5e-75 287.3 331 59.8
DCAR_013053 Daucus carota HOM05D007320 ORTHO05D009290 2.6e-75 286.6 324 57.1
A10p04990 Brassica napus HOM05D007320 ORTHO05D009290 9.7e-75 284.6 338 59.2
BraA10t42760Z Brassica rapa HOM05D007320 ORTHO05D009290 9.7e-75 284.6 338 59.2
SalBow8G5340 Salvia bowleyana HOM05D007320 ORTHO05D009290 8.2e-74 281.6 325 48.0
Migut.L01118 Erythranthe guttata HOM05D007320 ORTHO05D009290 1.1e-73 281.2 330 49.1
MBI06_g25716_MAGBIO Magnolia biondii HOM05D007320 ORTHO05D009290 9.1e-73 278.1 331 49.5
HanXRQChr17g0565321 Helianthus annuus HOM05D007320 ORTHO05D009290 3.5e-72 276.2 341 45.7
Eucgr.F01954 Eucalyptus grandis HOM05D007320 ORTHO05D009290 2.9e-71 273.1 340 55.6
Migut.C00284 Erythranthe guttata HOM05D007320 ORTHO05D009290 3.8e-71 272.7 319 50.2
ECA234G2345 Erigeron canadensis HOM05D007320 ORTHO05D009290 5.5e-70 268.9 340 45.3
SGA_v2.0_scaffold313G48283 Striga asiatica HOM05D007320 ORTHO05D009290 3.6e-69 266.2 322 46.6
Migut.D01592 Erythranthe guttata HOM05D007320 ORTHO05D009290 4.0e-68 262.7 330 47.9
SHI10502 Sapria himalayana HOM05D007320 ORTHO05D009290 2.0e-67 260.4 313 55.9
unitig_62.g23164 Utricularia gibba HOM05D007320 ORTHO05D009290 1.2e-64 251.1 343 42.3
Peaxi162Scf00745g00038 Petunia axillaris HOM05D007320 ORTHO05D009290 1.0e-63 248.1 338 45.6
Lsat_1_v5_gn_4_28301 Lactuca sativa HOM05D007320 ORTHO05D009290 2.9e-63 246.5 314 45.9
TPR.G5736 Trifolium pratense HOM05D007320 ORTHO05D009290 1.6e-61 240.7 269 49.8
PGR083G2305 Punica granatum HOM05D007320 ORTHO05D009290 3.6e-61 239.6 316 55.4
AUR62024073 Chenopodium quinoa HOM05D007320 ORTHO05D009290 4.7e-61 239.2 229 67.7
TPR.G34643 Trifolium pratense HOM05D007320 ORTHO05D009290 4.9e-50 202.6 169 59.8
MELO3C004341.2 Cucumis melo HOM05D007320 ORTHO05D009290 2.9e-47 193.4 238 46.2
Phvul.005G098533 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 4.1e-41 172.9 152 55.9
arahy.Tifrunner.gnm1.ann1.CSM94Q Arachis hypogaea HOM05D007320 ORTHO05D009290 2.1e-37 160.6 161 53.4
arahy.Tifrunner.gnm1.ann1.66V1NK Arachis hypogaea HOM05D007320 ORTHO05D009290 8.3e-34 148.7 151 53.0
Cpa.g.sc209.4 Carica papaya HOM05D007320 ORTHO05D009290 1.9e-30 137.5 177 47.5
Sc21g0003340 Simmondsia chinensis HOM05D007320 ORTHO05D009290 2.1e-29 134.0 99 66.7
PGSC0003DMG401001710 Solanum tuberosum HOM05D007320 ORTHO05D009290 5.2e-28 129.4 113 59.3
Dinv15900 Davidia involucrata HOM05D007320 ORTHO05D009290 4.9e-26 122.9 183 56.8
Sc21g0003330 Simmondsia chinensis HOM05D007320 ORTHO05D009290 9.2e-25 118.6 183 41.5
SalBow7G0970 Salvia bowleyana HOM05D000555 ORTHO05D000646 1.5e-19 101.3 102 52.9
arahy.Tifrunner.gnm1.ann1.5PR57S Arachis hypogaea HOM05D007320 ORTHO05D009290 2.8e-13 80.5 121 44.6
MELO3C021360.2 Cucumis melo HOM05D007320 ORTHO05D009290 4.7e-13 79.7 112 43.8
Peaxi162Scf00102g01049 Petunia axillaris HOM05D007320 ORTHO05D009290 7.8e-08 62.4 73 52.1


User provided reference genes

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