Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 3.8e-196 688.0 344 100.0
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 1.4e-182 642.9 344 92.4
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 4.5e-181 637.9 344 91.6
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 1.5e-139 500.0 345 73.9
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 8.1e-138 494.2 346 73.7
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 3.4e-136 488.8 347 72.0
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 5.8e-136 488.0 349 71.3
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 9.9e-136 487.3 344 72.1
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 2.9e-135 485.7 344 72.4
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 2.4e-134 482.6 346 70.8
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 9.3e-134 480.7 342 72.2
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.5e-131 473.4 345 69.6
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 1.3e-130 470.3 346 69.7
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 1.6e-130 469.9 345 69.3
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 2.1e-130 469.5 336 70.2
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 6.2e-130 468.0 357 67.8
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 1.1e-129 467.2 350 68.6
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 4.5e-128 461.8 339 69.3
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 1.1e-126 457.2 347 67.4
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 1.4e-126 456.8 346 65.3
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 9.3e-126 454.1 350 66.6
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 7.9e-125 451.1 319 70.2
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 1.3e-124 450.3 344 66.3
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 3.9e-124 448.7 341 67.4
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 6.7e-124 448.0 351 66.4
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 4.3e-123 445.3 349 65.3
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 5.7e-123 444.9 336 66.1
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 7.4e-123 444.5 346 65.3
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 1.6e-122 443.4 305 71.1
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 2.8e-122 442.6 348 65.2
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 8.2e-122 441.0 353 64.0
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 1.1e-121 440.7 359 63.2
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 1.4e-121 440.3 341 66.0
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 1.4e-121 440.3 352 65.6
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 1.8e-121 439.9 340 65.0
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 3.1e-121 439.1 345 65.5
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 5.3e-121 438.3 312 67.3
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 9.0e-121 437.6 347 64.0
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 1.5e-120 436.8 342 65.2
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 4.5e-120 435.3 333 66.4
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 5.8e-120 434.9 344 64.0
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 7.6e-120 434.5 357 63.3
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 1.0e-119 434.1 361 62.9
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 1.3e-119 433.7 349 63.9
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 1.7e-119 433.3 344 63.7
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 2.2e-119 433.0 342 63.7
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 5.0e-119 431.8 370 62.7
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 8.4e-119 431.0 331 66.8
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 2.5e-118 429.5 318 66.7
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 2.5e-118 429.5 344 63.1
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 3.2e-118 429.1 318 69.5
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 7.2e-118 427.9 359 63.0
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 7.2e-118 427.9 342 63.5
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 1.2e-117 427.2 300 69.3
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 1.2e-117 427.2 322 68.9
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 1.2e-117 427.2 340 64.1
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 1.6e-117 426.8 325 64.6
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 4.6e-117 425.2 344 63.1
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 6.1e-117 424.9 345 63.5
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 3.0e-116 422.5 342 62.9
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 3.9e-116 422.2 342 62.3
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 6.7e-116 421.4 335 63.0
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 4.3e-115 418.7 303 65.7
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 7.4e-115 417.9 348 62.9
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 6.3e-114 414.8 310 63.2
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 1.8e-113 413.3 320 65.0
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 6.9e-113 411.4 348 61.5
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 1.2e-112 410.6 348 59.5
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 3.4e-112 409.1 347 62.5
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 3.4e-112 409.1 299 69.2
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 3.4e-112 409.1 312 63.8
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 5.9e-112 408.3 348 59.2
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 2.2e-111 406.4 347 62.0
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 2.9e-111 406.0 356 58.7
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 3.8e-111 405.6 336 61.6
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 1.6e-109 400.2 350 59.7
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 2.1e-109 399.8 346 61.3
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 2.3e-108 396.4 319 63.3
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 5.1e-108 395.2 356 60.1
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 1.5e-107 393.7 351 60.1
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 1.7e-106 390.2 355 58.3
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 3.7e-106 389.0 348 60.1
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 3.7e-106 389.0 348 60.1
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.4e-105 387.1 312 62.2
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 1.7e-103 380.2 348 58.9
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 5.0e-103 378.6 294 64.3
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 3.2e-102 375.9 347 58.5
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 2.3e-100 369.8 322 59.0
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 6.7e-100 368.2 215 79.5
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 6.7e-100 368.2 316 60.8
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 5.7e-99 365.2 276 64.5
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 6.3e-98 361.7 276 62.7
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 8.2e-98 361.3 352 53.4
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 1.8e-97 360.1 258 68.2
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 9.1e-97 357.8 329 58.4
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 1.6e-96 357.1 231 70.1
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 9.4e-94 347.8 292 63.4
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 4.5e-88 328.9 346 50.0
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 2.7e-85 319.7 254 65.4
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 1.7e-82 310.5 349 47.6
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 5.2e-76 288.9 350 48.3
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.0e-68 264.6 300 47.0
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 2.0e-67 260.4 249 53.0
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 7.5e-67 258.5 234 60.3
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.3e-66 257.7 294 46.6
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 6.4e-66 255.4 306 43.8
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 4.1e-65 252.7 368 37.2
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 9.5e-62 241.5 228 56.6
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 1.5e-59 234.2 228 54.8
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 4.9e-58 229.2 321 43.3
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 1.0e-55 221.5 242 44.2
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.6e-48 197.6 298 39.9
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 6.2e-45 185.7 172 50.6
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 3.7e-42 176.4 348 35.6
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 2.1e-32 144.1 148 53.4
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 6.0e-32 142.5 157 54.8
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 1.0e-31 141.7 117 57.3
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 1.2e-19 101.7 147 47.6
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 5.6e-14 82.8 175 38.3
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 2.6e-11 73.9 68 52.9
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 9.3e-09 65.5 34 85.3
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 4.6e-08 63.2 101 41.6


User provided reference genes

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