Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 2.3e-98 362.8 274 100.0
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 4.7e-72 275.4 279 83.5
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 9.2e-68 261.2 277 80.9
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 5.2e-55 218.8 281 74.7
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 1.3e-50 204.1 276 70.7
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 8.7e-50 201.4 282 72.0
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 4.8e-48 195.7 277 70.0
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 1.4e-47 194.1 282 66.7
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 5.3e-47 192.2 280 62.1
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 4.5e-46 189.1 281 66.5
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 5.8e-46 188.7 274 70.8
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 3.8e-45 186.0 278 69.8
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 1.1e-44 184.5 284 68.3
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 1.4e-44 184.1 285 65.6
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 1.9e-44 183.7 282 68.8
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 7.1e-44 181.8 290 65.9
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 2.7e-43 179.9 282 68.4
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 6.0e-43 178.7 275 67.6
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 6.7e-42 175.3 276 68.1
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 2.5e-41 173.3 265 66.4
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 5.6e-41 172.2 279 65.2
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 2.1e-40 170.2 284 60.9
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 2.8e-40 169.9 284 60.6
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 2.8e-40 169.9 283 60.8
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 1.4e-39 167.5 279 58.8
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 1.8e-39 167.2 280 65.4
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 3.1e-39 166.4 278 68.0
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 4.0e-39 166.0 277 67.5
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 5.3e-39 165.6 283 58.0
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 6.9e-39 165.2 279 58.1
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 6.9e-39 165.2 279 58.1
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 6.9e-39 165.2 277 67.9
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 1.2e-38 164.5 274 65.7
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 2.0e-38 163.7 280 57.1
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 2.6e-38 163.3 317 58.0
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 3.4e-38 162.9 235 74.5
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 3.4e-38 162.9 277 66.8
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 2.9e-37 159.8 280 66.4
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 6.4e-37 158.7 255 64.7
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 1.1e-36 157.9 290 61.7
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 1.4e-36 157.5 274 62.0
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 1.9e-36 157.1 279 67.4
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 2.4e-36 156.8 282 63.5
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 2.4e-36 156.8 254 52.8
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 3.2e-36 156.4 280 63.9
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 7.1e-36 155.2 277 65.7
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 1.6e-35 154.1 275 57.8
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 1.6e-35 154.1 280 64.3
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 2.1e-35 153.7 282 64.5
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 2.7e-35 153.3 277 65.7
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 3.5e-35 152.9 235 67.2
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 4.6e-35 152.5 286 64.3
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 1.0e-34 151.4 288 63.9
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 3.0e-34 149.8 279 65.2
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 5.1e-34 149.1 289 59.9
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 5.1e-34 149.1 274 65.7
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 1.5e-33 147.5 280 49.6
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 1.9e-33 147.1 279 61.6
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 1.9e-33 147.1 274 60.6
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 9.6e-33 144.8 280 55.4
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 1.3e-32 144.4 281 63.7
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 2.8e-32 143.3 288 62.2
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 3.7e-32 142.9 277 62.5
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 3.7e-32 142.9 280 58.9
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 6.2e-32 142.1 289 64.0
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 1.4e-31 141.0 283 59.4
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 2.4e-31 140.2 274 39.8
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 2.4e-31 140.2 275 60.0
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 4.0e-31 139.4 309 48.9
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 5.3e-31 139.0 297 59.9
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 5.3e-31 139.0 255 67.5
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 3.4e-30 136.3 257 56.4
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 2.9e-29 133.3 152 56.6
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 2.9e-29 133.3 277 54.5
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 4.9e-29 132.5 260 57.3
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 8.4e-29 131.7 152 71.1
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 4.2e-28 129.4 280 62.9
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 5.5e-28 129.0 97 68.0
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 5.5e-28 129.0 97 68.0
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 5.5e-28 129.0 272 64.0
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 3.5e-27 126.3 149 66.4
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 4.6e-27 125.9 149 67.1
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 1.8e-26 124.0 128 68.8
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 6.7e-26 122.1 236 66.1
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 1.9e-25 120.6 274 63.1
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 7.4e-25 118.6 273 63.0
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 9.7e-25 118.2 273 63.0
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 2.2e-24 117.1 103 64.1
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 8.2e-24 115.2 307 47.6
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 5.3e-23 112.5 97 60.8
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 5.3e-23 112.5 97 60.8
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 6.9e-23 112.1 289 50.9
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 1.2e-22 111.3 281 60.1
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 1.5e-17 94.4 103 48.5
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 2.2e-16 90.5 97 53.6
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 2.2e-16 90.5 284 55.3
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 3.7e-16 89.7 288 54.5
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 4.8e-16 89.4 96 55.2
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 2.4e-15 87.0 285 54.0
Dinv24556 Davidia involucrata HOM05D000368 ORTHO05D009348 3.4e-14 83.2 140 71.4
Nitab4.5_0001842g0090 Nicotiana tabacum HOM05D000368 ORTHO05D009348 3.0e-10 70.1 278 35.3
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 3.9e-10 69.7 99 44.4
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 5.7e-09 65.9 206 53.4
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 7.4e-09 65.5 53 50.9
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 7.4e-09 65.5 39 66.7
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 1.7e-08 64.3 38 65.8
CSS0015725 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 1.7e-08 64.3 65 56.9
A10p09970 Brassica napus HOM05D000368 ORTHO05D009348 1.2e-06 58.2 28 78.6
Dinv28434 Davidia involucrata HOM05D000368 ORTHO05D000289 2.0e-06 57.4 59 49.2
arahy.Tifrunner.gnm1.ann1.4PMG8D Arachis hypogaea HOM05D000368 ORTHO05D009348 2.6e-06 57.0 84 44.0


User provided reference genes

Program Settings