Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G166601 Populus trichocarpa HOM05D000128 ORTHO05D332590 3.0e-37 157.9 76 100.0
Potri.001G464700 Populus trichocarpa HOM05D000128 ORTHO05D000059 1.1e-10 69.7 57 63.2
Oeu030993.2 Olea europaea HOM05D000128 ORTHO05D000059 2.7e-09 65.1 48 62.5
Oeu016459.1 Olea europaea HOM05D000128 ORTHO05D000059 1.7e-08 62.4 48 58.3
CSS0005983 Camellia sinensis var. sinensis HOM05D000128 ORTHO05D000059 5.1e-08 60.8 48 60.4
Oeu011193.1 Olea europaea HOM05D000128 ORTHO05D000059 8.7e-08 60.1 67 43.3
Potri.001G440700 Populus trichocarpa HOM05D000128 ORTHO05D000059 8.7e-08 60.1 45 60.0
PGSC0003DMG400031325 Solanum tuberosum HOM05D000128 ORTHO05D000059 1.1e-07 59.7 47 53.2
CSS0049845 Camellia sinensis var. sinensis HOM05D000128 ORTHO05D000059 1.5e-07 59.3 48 56.2
Oeu043183.1 Olea europaea HOM05D000128 ORTHO05D000059 1.5e-07 59.3 48 56.2
QL05p064350 Quercus lobata HOM05D000128 ORTHO05D000059 2.5e-07 58.5 35 68.6
Lju124C34T11 Lonicera japonica HOM05D000128 ORTHO05D000059 3.3e-07 58.2 47 55.3
Oeu059934.1 Olea europaea HOM05D000128 ORTHO05D000059 3.3e-07 58.2 47 55.3
Potri.001G464800 Populus trichocarpa HOM05D000128 ORTHO05D000059 3.3e-07 58.2 58 51.7
Potri.011G162828 Populus trichocarpa HOM05D000128 ORTHO05D000059 3.3e-07 58.2 47 57.4
Potri.011G162884 Populus trichocarpa HOM05D000128 ORTHO05D000059 3.3e-07 58.2 47 57.4
Potri.011G162900 Populus trichocarpa HOM05D000128 ORTHO05D000059 3.3e-07 58.2 47 57.4
Ah.01g004250 Amaranthus hybridus HOM05D000128 ORTHO05D000059 4.3e-07 57.8 51 52.9
PSO357G0134 Papaver somniferum HOM05D000128 ORTHO05D000059 4.3e-07 57.8 46 56.5
Atru.chr10.759 Acer truncatum HOM05D000128 ORTHO05D000059 5.6e-07 57.4 40 60.0
Oeu061565.1 Olea europaea HOM05D000128 ORTHO05D000059 5.6e-07 57.4 48 56.2
TWI38G0341 Tripterygium wilfordii HOM05D000128 ORTHO05D000059 5.6e-07 57.4 40 62.5
Actinidia31375 Actinidia chinensis HOM05D000128 ORTHO05D000059 7.3e-07 57.0 46 60.9
Migut.M01917 Erythranthe guttata HOM05D000128 ORTHO05D000059 7.3e-07 57.0 47 57.4
Potri.011G162666 Populus trichocarpa HOM05D000128 ORTHO05D000059 7.3e-07 57.0 45 57.8
Manes.06G052200 Manihot esculenta HOM05D000128 ORTHO05D000059 9.6e-07 56.6 43 60.5
Potri.011G162968 Populus trichocarpa HOM05D000128 ORTHO05D000059 9.6e-07 56.6 47 55.3
Aqoxy7G01441 Aquilegia oxysepala HOM05D000128 ORTHO05D000059 1.2e-06 56.2 41 56.1
CSS0002400 Camellia sinensis var. sinensis HOM05D000128 ORTHO05D000059 1.2e-06 56.2 47 55.3
CSS0040537 Camellia sinensis var. sinensis HOM05D000128 ORTHO05D000059 1.2e-06 56.2 47 55.3
Lj1C1225T13 Lonicera japonica HOM05D000128 ORTHO05D000059 1.2e-06 56.2 45 53.3
TWI38G1676 Tripterygium wilfordii HOM05D000128 ORTHO05D000059 1.2e-06 56.2 32 75.0
GSVIVG01021726001 Vitis vinifera HOM05D000128 ORTHO05D000059 1.2e-06 56.2 41 58.5
MSTRG.16302 Avicennia marina HOM05D000128 ORTHO05D000059 1.6e-06 55.8 47 53.2
MSTRG.26890 Avicennia marina HOM05D000128 ORTHO05D000059 1.6e-06 55.8 47 53.2
CANSAT35G1989 Cannabis sativa HOM05D000128 ORTHO05D000059 1.6e-06 55.8 40 60.0
TWI38G0555 Tripterygium wilfordii HOM05D000128 ORTHO05D000059 1.6e-06 55.8 35 68.6
Atru.chr10.731 Acer truncatum HOM05D000128 ORTHO05D000059 2.1e-06 55.5 47 55.3
Atru.chr10.748 Acer truncatum HOM05D000128 ORTHO05D000059 2.1e-06 55.5 47 55.3
CiPaw.09G146900 Carya illinoinensis HOM05D000128 ORTHO05D000059 2.1e-06 55.5 32 65.6
CiPaw.09G147100 Carya illinoinensis HOM05D000128 ORTHO05D000059 2.1e-06 55.5 32 65.6
MELO3C002844.2 Cucumis melo HOM05D000128 ORTHO05D000059 2.1e-06 55.5 43 55.8
Eucgr.D01011 Eucalyptus grandis HOM05D000128 ORTHO05D000059 2.1e-06 55.5 67 44.8
Potri.011G162732 Populus trichocarpa HOM05D000128 ORTHO05D000059 2.1e-06 55.5 46 52.2
Rhsim02G0165400 Rhododendron simsii HOM05D000128 ORTHO05D000059 2.1e-06 55.5 42 52.4
ClCG03G008370 Citrullus lanatus HOM05D000128 ORTHO05D000059 2.8e-06 55.1 47 53.2
CsaV3_1G037050 Cucumis sativus L. HOM05D000128 ORTHO05D000059 2.8e-06 55.1 45 53.3
Dinv27941 Davidia involucrata HOM05D000128 ORTHO05D000059 2.8e-06 55.1 45 55.6
Manes.14G125500 Manihot esculenta HOM05D000128 ORTHO05D000059 2.8e-06 55.1 53 50.9
Phvul.002G199500 Phaseolus vulgaris HOM05D000128 ORTHO05D000059 2.8e-06 55.1 45 55.6
Potri.011G158600 Populus trichocarpa HOM05D000128 ORTHO05D000059 2.8e-06 55.1 40 52.5
Actinidia32350 Actinidia chinensis HOM05D000128 ORTHO05D000059 3.6e-06 54.7 46 58.7
Ciclev10017782m.g Citrus clementina HOM05D000128 ORTHO05D000059 3.6e-06 54.7 38 60.5
Ciclev10018353m.g Citrus clementina HOM05D000128 ORTHO05D000059 3.6e-06 54.7 38 60.5
Oeu011186.1 Olea europaea HOM05D000128 ORTHO05D000059 3.6e-06 54.7 47 55.3
GSVIVG01020744001 Vitis vinifera HOM05D000128 ORTHO05D000059 3.6e-06 54.7 40 55.0
Actinidia30828 Actinidia chinensis HOM05D000128 ORTHO05D000059 4.7e-06 54.3 41 58.5
CSS0017837 Camellia sinensis var. sinensis HOM05D000128 ORTHO05D000059 4.7e-06 54.3 48 54.2
CSS0019793 Camellia sinensis var. sinensis HOM05D000128 ORTHO05D000059 4.7e-06 54.3 48 54.2
CiPaw.09G170700 Carya illinoinensis HOM05D000128 ORTHO05D000059 4.7e-06 54.3 32 62.5
PSO170G5683 Papaver somniferum HOM05D000128 ORTHO05D000059 4.7e-06 54.3 45 55.6
Psat7g094440 Pisum sativum HOM05D000128 ORTHO05D000059 4.7e-06 54.3 46 52.2
Potri.011G162916 Populus trichocarpa HOM05D000128 ORTHO05D000059 4.7e-06 54.3 57 52.6
Potri.011G163000 Populus trichocarpa HOM05D000128 ORTHO05D000059 4.7e-06 54.3 57 52.6
Rhsim02G0164800 Rhododendron simsii HOM05D000128 ORTHO05D000059 4.7e-06 54.3 47 53.2
Rhsim02G0165300 Rhododendron simsii HOM05D000128 ORTHO05D000059 4.7e-06 54.3 47 53.2
Solyc06g065060.1 Solanum lycopersicum HOM05D000128 ORTHO05D000059 4.7e-06 54.3 47 51.1
Sopen06g023570 Solanum pennellii HOM05D000128 ORTHO05D000059 4.7e-06 54.3 47 51.1
PGSC0003DMG400031326 Solanum tuberosum HOM05D000128 ORTHO05D000059 4.7e-06 54.3 47 51.1
EL10Ac3g07040 Beta vulgaris HOM05D000128 ORTHO05D000059 6.2e-06 53.9 50 48.0
EL10Ac3g07044 Beta vulgaris HOM05D000128 ORTHO05D000059 6.2e-06 53.9 50 48.0
EL10Ac3g07050 Beta vulgaris HOM05D000128 ORTHO05D000059 6.2e-06 53.9 50 48.0
CAN.G308.45 Capsicum annuum HOM05D000128 ORTHO05D000059 6.2e-06 53.9 47 48.9
Ciclev10003156m.g Citrus clementina HOM05D000128 ORTHO05D000059 6.2e-06 53.9 30 70.0
Haze_05852 Corylus avellana HOM05D000128 ORTHO05D000059 6.2e-06 53.9 38 55.3
Haze_05853 Corylus avellana HOM05D000128 ORTHO05D000059 6.2e-06 53.9 38 55.3
Nitab4.5_0006133g0020 Nicotiana tabacum HOM05D000128 ORTHO05D000059 6.2e-06 53.9 42 54.8
Oeu041130.1 Olea europaea HOM05D000128 ORTHO05D000059 6.2e-06 53.9 47 55.3
Phvul.002G234800 Phaseolus vulgaris HOM05D000128 ORTHO05D000059 6.2e-06 53.9 40 60.0
SalBow8G2559 Salvia bowleyana HOM05D000128 ORTHO05D000059 6.2e-06 53.9 32 75.0
Sed0001373 Sechium edule HOM05D000128 ORTHO05D000059 6.2e-06 53.9 47 51.1
Sopen06g023590 Solanum pennellii HOM05D000128 ORTHO05D000059 6.2e-06 53.9 47 53.2
Thecc.06G013200 Theobroma cacao HOM05D000128 ORTHO05D000059 6.2e-06 53.9 41 56.1
TAR626G1671 Trochodendron aralioides HOM05D000128 ORTHO05D000059 6.2e-06 53.9 47 53.2
arahy.Tifrunner.gnm1.ann1.08LC4Y Arachis hypogaea HOM05D000128 ORTHO05D000059 8.1e-06 53.5 51 49.0
MSTRG.1135 Avicennia marina HOM05D000128 ORTHO05D000059 8.1e-06 53.5 45 51.1
Duzib160G0384 Durio zibethinus HOM05D000128 ORTHO05D000059 8.1e-06 53.5 38 60.5
Nn1g01930 Nelumbo nucifera HOM05D000128 ORTHO05D000059 8.1e-06 53.5 40 57.5
Nn3g19332 Nelumbo nucifera HOM05D000128 ORTHO05D000059 8.1e-06 53.5 40 57.5
Oeu018574.1 Olea europaea HOM05D000128 ORTHO05D000059 8.1e-06 53.5 47 55.3
PGR083G2016 Punica granatum HOM05D000128 ORTHO05D000059 8.1e-06 53.5 32 65.6
TWI38G2014 Tripterygium wilfordii HOM05D000128 ORTHO05D000059 8.1e-06 53.5 40 57.5
VMungo0251G1215 Vigna mungo HOM05D000128 ORTHO05D000059 8.1e-06 53.5 40 57.5


User provided reference genes

Program Settings