Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G235700 Populus trichocarpa HOM05D002310 ORTHO05D002326 0.0e+00 1532.3 782 100.0
Sabra10G0182800 Salix brachista HOM05D002310 ORTHO05D002326 0.0e+00 1307.4 764 89.0
Potri.008G024500 Populus trichocarpa HOM05D002310 ORTHO05D002326 0.0e+00 1153.3 768 78.3
Sabra08G0016500 Salix brachista HOM05D002310 ORTHO05D002326 0.0e+00 1077.4 767 74.7
Manes.10G057200 Manihot esculenta HOM05D002310 ORTHO05D002326 1.9e-214 750.0 770 52.9
QL04p042592 Quercus lobata HOM05D002310 ORTHO05D002326 3.8e-159 566.2 794 43.6
Cfa011244 Carpinus fangiana HOM05D002310 ORTHO05D002326 5.2e-156 555.8 787 43.6
Haze_02585 Corylus avellana HOM05D002310 ORTHO05D002326 3.4e-155 553.1 786 43.5
Duzib114G0931 Durio zibethinus HOM05D002310 ORTHO05D002326 8.5e-151 538.5 773 43.6
Thecc.10G104000 Theobroma cacao HOM05D002310 ORTHO05D002326 1.6e-149 534.3 773 43.3
CiPaw.13G037400 Carya illinoinensis HOM05D002310 ORTHO05D002326 3.5e-144 516.5 785 40.8
Dinv20806 Davidia involucrata HOM05D002310 ORTHO05D002326 5.0e-143 512.7 781 40.8
Atru.chr12.977 Acer truncatum HOM05D002310 ORTHO05D002326 6.6e-143 512.3 790 40.5
Duzib106G1173 Durio zibethinus HOM05D002310 ORTHO05D002326 6.6e-143 512.3 775 43.0
COL.COLO4_20106 Corchorus olitorius HOM05D002310 ORTHO05D002326 8.6e-143 511.9 776 42.5
Gorai.012G023700 Gossypium raimondii HOM05D002310 ORTHO05D002326 1.2e-141 508.1 773 42.3
CiPaw.14G029600 Carya illinoinensis HOM05D002310 ORTHO05D002326 4.7e-141 506.1 782 40.5
Gohir.A05G395100 Gossypium hirsutum HOM05D002310 ORTHO05D002326 1.2e-139 501.5 774 41.9
Gohir.D04G019900 Gossypium hirsutum HOM05D002310 ORTHO05D002326 7.5e-139 498.8 773 42.0
Cpa.g.sc19.12 Carica papaya HOM05D002310 ORTHO05D002326 6.3e-138 495.7 745 41.5
TWI38G0268 Tripterygium wilfordii HOM05D002310 ORTHO05D002326 6.4e-130 469.2 768 40.4
Dinv06794 Davidia involucrata HOM05D002310 ORTHO05D002326 2.5e-126 457.2 795 39.6
Prupe.2G084400 Prunus persica HOM05D002310 ORTHO05D002326 9.5e-126 455.3 810 39.4
TWI15G0532 Tripterygium wilfordii HOM05D002310 ORTHO05D002326 9.5e-126 455.3 769 39.5
CSS0033098 Camellia sinensis var. sinensis HOM05D002310 ORTHO05D002326 1.3e-122 444.9 802 37.3
MD07G1067200 Malus domestica HOM05D002310 ORTHO05D002326 2.7e-120 437.2 809 38.3
Lj2C29T14 Lonicera japonica HOM05D002310 ORTHO05D002326 3.1e-108 397.1 784 36.2
RcHm_v2.0_Chr1g0332961 Rosa chinensis HOM05D002310 ORTHO05D002326 3.4e-107 393.7 824 35.8
MD02G1254600 Malus domestica HOM05D002310 ORTHO05D002326 5.8e-107 392.9 810 37.2
FAN03G0072 Fragaria x ananassa HOM05D002310 ORTHO05D002326 1.3e-101 375.2 825 35.2
Hma1.2p1_0246F.1_g101720 Hydrangea macrophylla HOM05D002310 ORTHO05D002326 2.4e-100 370.9 783 34.9
arahy.Tifrunner.gnm1.ann1.Y62G5D Arachis hypogaea HOM05D002310 ORTHO05D002326 4.0e-100 370.2 783 34.6
arahy.Tifrunner.gnm1.ann1.WY8BRN Arachis hypogaea HOM05D002310 ORTHO05D002326 2.0e-99 367.9 783 34.7
Dinv01755 Davidia involucrata HOM05D002310 ORTHO05D002326 7.6e-99 365.9 596 39.3
FAN06G0045 Fragaria x ananassa HOM05D002310 ORTHO05D002326 2.2e-98 364.4 823 34.5
Actinidia18583 Actinidia chinensis HOM05D002310 ORTHO05D002326 2.9e-98 364.0 779 34.4
FAN01G2365 Fragaria x ananassa HOM05D002310 ORTHO05D002326 6.4e-98 362.8 823 34.4
FvH4_7g05850 Fragaria vesca HOM05D002310 ORTHO05D002326 4.2e-97 360.1 823 34.4
FAN10G0348 Fragaria x ananassa HOM05D002310 ORTHO05D002326 7.1e-97 359.4 823 34.6
Glyma.20G187500 Glycine max HOM05D002310 ORTHO05D002326 7.3e-94 349.4 767 33.5
TAR633G0746 Trochodendron aralioides HOM05D002310 ORTHO05D002326 1.6e-93 348.2 785 34.8
Glyma.10G202800 Glycine max HOM05D002310 ORTHO05D002326 2.4e-92 344.4 769 33.4
Ciclev10030758m.g Citrus clementina HOM05D002310 ORTHO05D002326 9.0e-92 342.4 519 40.3
Lj5g0012410 Lotus japonicus HOM05D002310 ORTHO05D002326 3.3e-86 323.9 781 32.7
ClCG08G008160 Citrullus lanatus HOM05D002310 ORTHO05D002326 1.0e-82 312.4 780 32.4
Phvul.007G104100 Phaseolus vulgaris HOM05D002310 ORTHO05D002326 2.9e-82 310.8 769 32.8
Rhsim03G0104900 Rhododendron simsii HOM05D002310 ORTHO05D002326 1.4e-76 292.0 785 32.5
Sed0017107 Sechium edule HOM05D002310 ORTHO05D002326 1.4e-76 292.0 793 31.7
vmacro07230 Vaccinium macrocarpon HOM05D002310 ORTHO05D002326 2.4e-76 291.2 776 32.9
MELO3C019889.2 Cucumis melo HOM05D002310 ORTHO05D002326 4.1e-76 290.4 785 31.2
Lalb_Chr02g0151431 Lupinus albus HOM05D002310 ORTHO05D002326 1.4e-73 282.0 782 30.4
Lalb_Chr21g0313261 Lupinus albus HOM05D002310 ORTHO05D002326 2.1e-72 278.1 794 31.2
Ca_10501_v3 Cicer arietinum L. HOM05D002310 ORTHO05D002326 1.0e-71 275.8 775 31.1
CANSAT56G1674 Cannabis sativa HOM05D002310 ORTHO05D002326 5.1e-71 273.5 1010 27.4
Psat6g176920 Pisum sativum HOM05D002310 ORTHO05D002326 6.7e-71 273.1 796 30.8
CsaV3_6G004130 Cucumis sativus L. HOM05D002310 ORTHO05D002326 1.1e-70 272.3 785 31.0
Medtr1g492940 Medicago truncatula HOM05D002310 ORTHO05D002326 7.7e-59 233.0 880 27.2
Nn6g35014 Nelumbo nucifera HOM05D002310 ORTHO05D002326 7.9e-56 223.0 758 29.9
TPR.G2524 Trifolium pratense HOM05D002310 ORTHO05D002326 4.4e-54 217.2 908 26.5
DCAR_006351 Daucus carota HOM05D002310 ORTHO05D002326 6.5e-42 176.8 654 26.8
Nitab4.5_0005390g0030 Nicotiana tabacum HOM05D002310 ORTHO05D002326 5.2e-39 167.2 656 27.7
Nitab4.5_0000962g0080 Nicotiana tabacum HOM05D002310 ORTHO05D002326 3.4e-38 164.5 657 27.7
Lsat_1_v5_gn_8_24480 Lactuca sativa HOM05D002310 ORTHO05D002326 3.7e-37 161.0 806 27.7
AUR62030725 Chenopodium quinoa HOM05D002310 ORTHO05D002326 8.3e-37 159.8 786 27.0
Sc09g0005520 Simmondsia chinensis HOM05D002310 ORTHO05D002326 1.4e-36 159.1 739 26.1
Eucgr.J01002 Eucalyptus grandis HOM05D002310 ORTHO05D002326 7.7e-35 153.3 516 29.7
AUR62036362 Chenopodium quinoa HOM05D002310 ORTHO05D002326 6.5e-34 150.2 793 26.4
PGSC0003DMG400019495 Solanum tuberosum HOM05D002310 ORTHO05D002326 1.5e-33 149.1 617 26.7
Sopen11g003200 Solanum pennellii HOM05D002310 ORTHO05D002326 5.5e-33 147.1 642 27.1
Aqoxy4G02858 Aquilegia oxysepala HOM05D002310 ORTHO05D002326 1.2e-32 146.0 791 26.2
Ah.04g163710 Amaranthus hybridus HOM05D002310 ORTHO05D002326 1.8e-31 142.1 799 25.0
PGR044G0491 Punica granatum HOM05D002310 ORTHO05D002326 2.0e-30 138.7 784 25.9
Cc02_g09970 Coffea canephora HOM05D002310 ORTHO05D002326 2.6e-30 138.3 517 27.7
HanXRQChr08g0217861 Helianthus annuus HOM05D002310 ORTHO05D002326 7.5e-30 136.7 801 25.6
ECA233G1823 Erigeron canadensis HOM05D002310 ORTHO05D002326 1.1e-28 132.9 775 25.0
CAN.G534.15 Capsicum annuum HOM05D002310 ORTHO05D002326 3.8e-26 124.4 699 25.6
Solyc11g007310.3 Solanum lycopersicum HOM05D002310 ORTHO05D002326 5.0e-26 124.0 524 27.5
Peaxi162Scf00244g01214 Petunia axillaris HOM05D002310 ORTHO05D002326 8.6e-26 123.2 535 26.7
Aqoxy2G01357 Aquilegia oxysepala HOM05D002310 ORTHO05D002326 6.1e-24 117.1 783 26.1
Dinv42583 Davidia involucrata HOM05D002310 ORTHO05D002326 6.1e-24 117.1 779 25.2
Rhsim13G0106900 Rhododendron simsii HOM05D002310 ORTHO05D002326 2.3e-23 115.2 728 26.2
Sed0026294 Sechium edule HOM05D002310 ORTHO05D002326 5.7e-22 110.5 310 29.4
ATR0820G154 Amborella trichopoda HOM05D002310 ORTHO05D002326 1.4e-20 105.9 812 25.2
CSS0005169 Camellia sinensis var. sinensis HOM05D002310 ORTHO05D002326 1.4e-20 105.9 742 25.2
PSO443G0025 Papaver somniferum HOM05D002310 ORTHO05D002326 3.2e-20 104.8 740 24.7
PSO384G5061 Papaver somniferum HOM05D002310 ORTHO05D002326 1.2e-19 102.8 739 24.5
Oeu059860.1 Olea europaea HOM05D002310 ORTHO05D002326 7.8e-19 100.1 177 37.9
GSVIVG01031382001 Vitis vinifera HOM05D002310 ORTHO05D002326 5.2e-15 87.4 561 25.7
Actinidia07217 Actinidia chinensis HOM05D002310 ORTHO05D002326 2.3e-10 72.0 776 23.2
Actinidia24186 Actinidia chinensis HOM05D002310 ORTHO05D002326 3.3e-09 68.2 181 34.3
Eucgr.B03884 Eucalyptus grandis HOM05D002310 ORTHO05D002326 4.3e-09 67.8 196 30.1
Lj2A990G28 Lonicera japonica HOM05D002310 ORTHO05D002326 2.8e-08 65.1 103 43.7
DCAR_012177 Daucus carota HOM05D002310 ORTHO05D002326 4.7e-08 64.3 55 60.0
Duzib168G1650 Durio zibethinus HOM05D002310 ORTHO05D002326 1.8e-07 62.4 101 40.6
SGA_v2.0_scaffold147G36352 Striga asiatica HOM05D002310 ORTHO05D002326 4.0e-07 61.2 86 41.9
GSVIVG01034740001 Vitis vinifera HOM05D002310 ORTHO05D002326 4.0e-07 61.2 39 69.2
SalBow6G0002 Salvia bowleyana HOM05D002310 ORTHO05D002326 5.2e-07 60.8 206 29.1
CAN.G644.19 Capsicum annuum HOM05D002310 ORTHO05D002326 6.8e-07 60.5 216 28.7
SEGI_33353 Sequoiadendron giganteum HOM05D002310 ORTHO05D002326 1.2e-06 59.7 191 28.3
Zm00001eb138970 Zea mays HOM05D002310 ORTHO05D002326 1.2e-06 59.7 178 27.5
Thecc.09G289700 Theobroma cacao HOM05D002310 ORTHO05D002326 2.6e-06 58.5 85 40.0
Oeu050195.1 Olea europaea HOM05D002310 ORTHO05D002326 3.4e-06 58.2 315 24.1
PGR102G1882 Punica granatum HOM05D002310 ORTHO05D002326 3.4e-06 58.2 203 31.0
Migut.D02361 Erythranthe guttata HOM05D002310 ORTHO05D002326 7.5e-06 57.0 251 25.9


User provided reference genes

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