Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G224111 Populus trichocarpa HOM05D007167 ORTHO05D000922 9.8e-17 89.0 43 100.0
Potri.008G224701 Populus trichocarpa HOM05D007167 ORTHO05D000922 6.4e-16 86.3 43 97.7
Migut.O00649 Erythranthe guttata HOM05D001319 ORTHO05D000922 8.6e-13 75.9 42 88.1
Manes.S008829 Manihot esculenta HOM05D007167 ORTHO05D000922 1.1e-12 75.5 43 86.0
Manes.S055516 Manihot esculenta HOM05D007167 ORTHO05D000922 1.1e-12 75.5 43 86.0
Manes.S056016 Manihot esculenta HOM05D007167 ORTHO05D000922 1.1e-12 75.5 43 86.0
Sopen00g004060 Solanum pennellii HOM05D001828 ORTHO05D001745 3.3e-12 73.9 38 89.5
Manes.S024416 Manihot esculenta HOM05D001319 ORTHO05D000922 4.3e-12 73.6 39 89.7
Manes.S030952 Manihot esculenta HOM05D001319 ORTHO05D000922 4.3e-12 73.6 39 89.7
Manes.S055616 Manihot esculenta HOM05D001319 ORTHO05D000922 4.3e-12 73.6 39 89.7
PGSC0003DMG400034963 Solanum tuberosum HOM05D007167 ORTHO05D000922 9.5e-12 72.4 38 92.1
PGSC0003DMG400039430 Solanum tuberosum HOM05D007167 ORTHO05D000922 9.5e-12 72.4 38 92.1
CiPaw.15G104600 Carya illinoinensis HOM05D001319 ORTHO05D000922 1.2e-11 72.0 40 87.5
CiPaw.15G105500 Carya illinoinensis HOM05D001319 ORTHO05D000922 1.2e-11 72.0 40 87.5
unitig_813.g34371 Utricularia gibba HOM05D007167 ORTHO05D000922 1.2e-11 72.0 39 87.2
Carub.0002s0966 Capsella rubella HOM05D001319 ORTHO05D000922 1.6e-11 71.6 41 87.8
Carub.0026s0006 Capsella rubella HOM05D001319 ORTHO05D000922 1.6e-11 71.6 41 87.8
Sopen00g007010 Solanum pennellii HOM05D007167 ORTHO05D000922 1.6e-11 71.6 36 94.4
Sc14g0003770 Simmondsia chinensis HOM05D007167 ORTHO05D001070 2.1e-11 71.2 39 89.7
Sc14g0003870 Simmondsia chinensis HOM05D007167 ORTHO05D013628 2.1e-11 71.2 39 89.7
Sc14g0003940 Simmondsia chinensis HOM05D007167 ORTHO05D013628 2.1e-11 71.2 39 89.7
Sc14g0004250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 2.1e-11 71.2 39 89.7
Sc14g0004350 Simmondsia chinensis HOM05D007167 ORTHO05D001679 2.1e-11 71.2 39 89.7
ScUNg0000050 Simmondsia chinensis HOM05D007167 ORTHO05D000922 2.1e-11 71.2 39 89.7
ScUNg0000170 Simmondsia chinensis HOM05D007167 ORTHO05D000922 2.1e-11 71.2 39 89.7
ScUNg0000250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 2.1e-11 71.2 39 89.7
ScUNg0000310 Simmondsia chinensis HOM05D007167 ORTHO05D001679 2.1e-11 71.2 39 89.7
ScUNg0000440 Simmondsia chinensis HOM05D013320 ORTHO05D000922 2.1e-11 71.2 39 89.7
ScUNg0000510 Simmondsia chinensis HOM05D007167 ORTHO05D000922 2.1e-11 71.2 39 89.7
ScUNg0000660 Simmondsia chinensis HOM05D007167 ORTHO05D001679 2.1e-11 71.2 39 89.7
ScUNg0000690 Simmondsia chinensis HOM05D007167 ORTHO05D001679 2.1e-11 71.2 39 89.7
ScUNg0000730 Simmondsia chinensis HOM05D007167 ORTHO05D001679 2.1e-11 71.2 39 89.7
ScUNg0000780 Simmondsia chinensis HOM05D007167 ORTHO05D013628 2.1e-11 71.2 39 89.7
ScUNg0000950 Simmondsia chinensis HOM05D007167 ORTHO05D000922 2.1e-11 71.2 39 89.7
ScUNg0001240 Simmondsia chinensis HOM05D007167 ORTHO05D001679 2.1e-11 71.2 39 89.7
ScUNg0001280 Simmondsia chinensis HOM05D007167 ORTHO05D001679 2.1e-11 71.2 39 89.7
ScUNg0001330 Simmondsia chinensis HOM05D007167 ORTHO05D013628 2.1e-11 71.2 39 89.7
ScUNg0001370 Simmondsia chinensis HOM05D007167 ORTHO05D001679 2.1e-11 71.2 39 89.7
ScUNg0001420 Simmondsia chinensis HOM05D007167 ORTHO05D001679 2.1e-11 71.2 39 89.7
BcaB04g16894 Brassica carinata HOM05D001319 ORTHO05D000922 3.6e-11 70.5 41 87.8
Thhalv10028274m.g Eutrema salsugineum HOM05D001319 ORTHO05D000922 3.6e-11 70.5 41 87.8
Thhalv10028342m.g Eutrema salsugineum HOM05D001319 ORTHO05D000922 3.6e-11 70.5 41 87.8
CiPaw.15G100800 Carya illinoinensis HOM05D001319 ORTHO05D000922 6.2e-11 69.7 38 86.8
Migut.A01243 Erythranthe guttata HOM05D001319 ORTHO05D000922 6.2e-11 69.7 43 81.4
Lj2g0014759 Lotus japonicus HOM05D001319 ORTHO05D000922 8.1e-11 69.3 40 85.0
Lj6g0022573 Lotus japonicus HOM05D001319 ORTHO05D000922 8.1e-11 69.3 40 85.0
LjContig00006g0020595 Lotus japonicus HOM05D001319 ORTHO05D000922 8.1e-11 69.3 40 85.0
LjContig00488g0020088 Lotus japonicus HOM05D001319 ORTHO05D000922 8.1e-11 69.3 40 85.0
ScUNg0001100 Simmondsia chinensis HOM05D007167 ORTHO05D000922 1.4e-10 68.6 36 91.7
MELO3C027007.2 Cucumis melo HOM05D007167 ORTHO05D000922 2.3e-10 67.8 42 81.0
BcaC06g35655 Brassica carinata HOM05D001319 ORTHO05D000922 3.1e-10 67.4 41 82.9
Glyma.13G012200 Glycine max HOM05D007167 ORTHO05D000922 3.1e-10 67.4 40 85.0
Glyma.U007802 Glycine max HOM05D001319 ORTHO05D000922 3.1e-10 67.4 40 85.0
Cre14.g634322 Chlamydomonas reinhardtii HOM05D007167 ORTHO05D000922 5.2e-10 66.6 39 79.5
Cre14.g634365 Chlamydomonas reinhardtii HOM05D007167 ORTHO05D000922 5.2e-10 66.6 39 79.5
BcaC03g17344 Brassica carinata HOM05D000920 ORTHO05D000922 2.6e-09 64.3 41 82.9
Cpa.g.sc0.66 Carica papaya HOM05D007167 ORTHO05D000922 4.4e-09 63.5 35 88.6
Psat0s1917g0080 Pisum sativum HOM05D001828 ORTHO05D001745 5.8e-09 63.2 38 81.6
EL10Ac4g08190 Beta vulgaris HOM05D007167 ORTHO05D000922 1.3e-08 62.0 31 93.5
A06p26520 Brassica napus HOM05D007167 ORTHO05D000922 1.3e-08 62.0 35 88.6
Migut.A01195 Erythranthe guttata HOM05D001319 ORTHO05D000922 2.9e-08 60.8 35 82.9
PGSC0003DMG400043107 Solanum tuberosum HOM05D007167 ORTHO05D000922 1.4e-07 58.5 34 85.3
BcaNung07382 Brassica carinata HOM05D000920 ORTHO05D000922 1.9e-07 58.2 33 87.9
unitig_135.g35492 Utricularia gibba HOM05D007167 ORTHO05D000922 3.2e-07 57.4 28 92.9
Nn213s45230 Nelumbo nucifera HOM05D001319 ORTHO05D000922 4.1e-07 57.0 33 84.8
Nn236s45578 Nelumbo nucifera HOM05D001319 ORTHO05D000922 4.1e-07 57.0 33 84.8
Nn3g20492 Nelumbo nucifera HOM05D001319 ORTHO05D000922 4.1e-07 57.0 33 84.8
A01p26880 Brassica napus HOM05D000920 ORTHO05D010211 2.7e-06 54.3 55 58.2
BNapus_Darmor_BZH_scaffold_107p00080 Brassica napus HOM05D007167 ORTHO05D000922 3.5e-06 53.9 31 87.1
unitig_885.g34271 Utricularia gibba HOM05D007167 ORTHO05D000922 7.8e-06 52.8 26 92.3


User provided reference genes

Program Settings