Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G180300 Populus trichocarpa HOM05D005997 ORTHO05D008323 8.0e-174 613.6 298 100.0
Sabra08G0137600 Salix brachista HOM05D005997 ORTHO05D008323 1.7e-160 569.3 290 94.1
Manes.03G134100 Manihot esculenta HOM05D005997 ORTHO05D008323 3.7e-123 445.3 287 77.7
Ciclev10009024m.g Citrus clementina HOM05D005997 ORTHO05D008323 2.1e-121 439.5 296 72.3
Gohir.D01G072400 Gossypium hirsutum HOM05D005997 ORTHO05D008323 2.1e-121 439.5 305 72.8
FAN21G1688 Fragaria x ananassa HOM05D005997 ORTHO05D008323 3.5e-121 438.7 296 73.6
RcHm_v2.0_Chr5g0042181 Rosa chinensis HOM05D005997 ORTHO05D008323 2.3e-120 436.0 287 75.6
Thecc.07G024000 Theobroma cacao HOM05D005997 ORTHO05D008323 3.9e-120 435.3 302 71.5
Gorai.002G095400 Gossypium raimondii HOM05D005997 ORTHO05D008323 1.1e-119 433.7 293 74.1
RcHm_v2.0_Chr5g0042111 Rosa chinensis HOM05D005997 ORTHO05D008323 1.9e-119 433.0 293 73.0
FAN25G0611 Fragaria x ananassa HOM05D005997 ORTHO05D008323 1.6e-118 429.9 321 69.2
TWI38G0893 Tripterygium wilfordii HOM05D005997 ORTHO05D008323 2.1e-118 429.5 293 72.0
COL.COLO4_09766 Corchorus olitorius HOM05D005997 ORTHO05D008323 2.8e-118 429.1 297 71.0
Gohir.A01G086200 Gossypium hirsutum HOM05D005997 ORTHO05D008323 3.6e-118 428.7 289 74.4
Dinv40826 Davidia involucrata HOM05D005997 ORTHO05D008323 3.1e-117 425.6 257 80.5
Prupe.4G230500 Prunus persica HOM05D005997 ORTHO05D008323 8.9e-117 424.1 288 75.0
TAR624G0829 Trochodendron aralioides HOM05D005997 ORTHO05D008323 8.9e-117 424.1 243 83.1
GSVIVG01037764001 Vitis vinifera HOM05D005997 ORTHO05D008323 3.8e-115 418.7 293 72.0
Duzib213G0008 Durio zibethinus HOM05D005997 ORTHO05D008323 4.9e-115 418.3 286 72.4
Eucgr.F03518 Eucalyptus grandis HOM05D005997 ORTHO05D008323 8.4e-115 417.5 290 71.7
Actinidia00103 Actinidia chinensis HOM05D005997 ORTHO05D008323 4.2e-114 415.2 292 70.2
Hma1.2p1_0036F.1_g022850 Hydrangea macrophylla HOM05D005997 ORTHO05D008323 3.5e-113 412.1 244 79.5
Cc05_g14560 Coffea canephora HOM05D005997 ORTHO05D008323 7.8e-113 411.0 286 70.3
Lj6g0009736 Lotus japonicus HOM05D005997 ORTHO05D008323 1.3e-112 410.2 297 67.7
MD11G1206400 Malus domestica HOM05D005997 ORTHO05D008323 1.7e-112 409.8 296 69.9
VMungo0540G2314 Vigna mungo HOM05D005997 ORTHO05D008323 3.0e-112 409.1 297 66.0
Phvul.006G051400 Phaseolus vulgaris HOM05D005997 ORTHO05D008323 1.5e-111 406.8 286 68.2
SGA_v2.0_scaffold168G38522 Striga asiatica HOM05D005997 ORTHO05D008323 5.6e-111 404.8 276 69.2
Glyma.08G325100 Glycine max HOM05D005997 ORTHO05D008323 7.3e-111 404.4 301 65.4
Nn1g03269 Nelumbo nucifera HOM05D005997 ORTHO05D008323 2.1e-110 402.9 296 68.2
Nitab4.5_0010102g0010 Nicotiana tabacum HOM05D005997 ORTHO05D008323 1.8e-109 399.8 231 78.8
Sc07g0002940 Simmondsia chinensis HOM05D005997 ORTHO05D008323 3.1e-109 399.1 287 68.3
CAN.G337.36 Capsicum annuum HOM05D005997 ORTHO05D008323 4.0e-109 398.7 242 77.3
FvH4_3g23860 Fragaria vesca HOM05D005997 ORTHO05D008323 5.3e-109 398.3 230 81.7
arahy.Tifrunner.gnm1.ann1.JACZ02 Arachis hypogaea HOM05D005997 ORTHO05D008323 1.2e-108 397.1 331 59.5
arahy.Tifrunner.gnm1.ann1.N1CS9Q Arachis hypogaea HOM05D005997 ORTHO05D008323 1.5e-108 396.7 276 68.8
Migut.M01687 Erythranthe guttata HOM05D005997 ORTHO05D008323 1.5e-108 396.7 299 66.6
Solyc07g065180.3 Solanum lycopersicum HOM05D005997 ORTHO05D008323 1.5e-108 396.7 239 76.2
Sopen07g033400 Solanum pennellii HOM05D005997 ORTHO05D008323 1.5e-108 396.7 231 78.4
Nitab4.5_0001160g0200 Nicotiana tabacum HOM05D005997 ORTHO05D008323 2.6e-108 396.0 231 78.4
PGSC0003DMG400022292 Solanum tuberosum HOM05D005997 ORTHO05D008323 2.6e-108 396.0 249 74.7
CANSAT11G0206 Cannabis sativa HOM05D005997 ORTHO05D008323 9.9e-108 394.0 239 78.7
CiPaw.12G135200 Carya illinoinensis HOM05D005997 ORTHO05D008323 1.3e-107 393.7 220 85.0
MSTRG.6975 Avicennia marina HOM05D005997 ORTHO05D008323 1.7e-107 393.3 288 66.7
Aqoxy1G04030 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 6.4e-107 391.3 261 72.0
Psat5g172000 Pisum sativum HOM05D005997 ORTHO05D008323 3.2e-106 389.0 299 64.2
CsaV3_7G018710 Cucumis sativus L. HOM05D005997 ORTHO05D008323 4.2e-106 388.7 291 64.9
TPR.G1907 Trifolium pratense HOM05D005997 ORTHO05D008323 1.2e-105 387.1 303 63.7
PSO210G1255 Papaver somniferum HOM05D005997 ORTHO05D008323 2.1e-105 386.3 238 74.8
Rhsim06G0225700 Rhododendron simsii HOM05D005997 ORTHO05D008323 4.6e-105 385.2 284 67.6
DCAR_022603 Daucus carota HOM05D005997 ORTHO05D008323 7.9e-105 384.4 237 75.9
Lalb_Chr06g0174051 Lupinus albus HOM05D005997 ORTHO05D008323 1.3e-104 383.6 297 63.3
Ca_20145_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 3.0e-104 382.5 294 63.3
SalBow8G0955 Salvia bowleyana HOM05D005997 ORTHO05D008323 1.9e-103 379.8 288 63.9
Sed0012266 Sechium edule HOM05D005997 ORTHO05D008323 1.9e-103 379.8 292 64.0
THA.LOC104826490 Tarenaya hassleriana HOM05D005997 ORTHO05D008323 5.6e-103 378.3 283 66.8
Medtr3g055920 Medicago truncatula HOM05D005997 ORTHO05D008323 9.6e-103 377.5 250 73.6
Ca_20142_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 6.2e-102 374.8 294 62.6
EL10Ac4g07628 Beta vulgaris HOM05D005997 ORTHO05D008323 8.1e-102 374.4 274 67.5
ClCG09G021010 Citrullus lanatus HOM05D005997 ORTHO05D008323 1.1e-101 374.0 330 57.9
Thhalv10011693m.g Eutrema salsugineum HOM05D005997 ORTHO05D008323 1.5e-100 370.2 252 69.4
PGR044G2356 Punica granatum HOM05D005997 ORTHO05D008323 7.6e-100 367.9 216 80.1
Aa31LG10G3760 Aethionema arabicum HOM05D005997 ORTHO05D008323 9.9e-100 367.5 285 64.9
MBI16_g42314_MAGBIO Magnolia biondii HOM05D005997 ORTHO05D008323 9.9e-100 367.5 238 73.5
AL1G58220 Arabidopsis lyrata HOM05D005997 ORTHO05D008323 1.3e-99 367.1 279 64.2
Oeu019619.1 Olea europaea HOM05D005997 ORTHO05D008323 3.8e-99 365.5 315 61.3
Os03g0587100 Oryza sativa ssp. japonica HOM05D005997 ORTHO05D008323 4.9e-99 365.2 219 75.3
Carub.0001s3961 Capsella rubella HOM05D005997 ORTHO05D008323 6.4e-99 364.8 239 72.0
Zm00001eb049320 Zea mays HOM05D005997 ORTHO05D008323 1.1e-98 364.0 227 73.6
Sp1g37390 Schrenkiella parvula HOM05D005997 ORTHO05D008323 1.6e-97 360.1 286 63.6
Lj1C884G3 Lonicera japonica HOM05D005997 ORTHO05D008323 3.5e-97 359.0 294 61.9
BraA06t23516Z Brassica rapa HOM05D005997 ORTHO05D008323 4.6e-97 358.6 232 71.6
ATR0712G169 Amborella trichopoda HOM05D005997 ORTHO05D008323 6.0e-97 358.2 218 76.1
AT1G50575 Arabidopsis thaliana HOM05D005997 ORTHO05D008323 7.9e-97 357.8 270 63.0
ECA236G3940 Erigeron canadensis HOM05D004336 ORTHO05D005367 1.3e-96 357.1 227 74.0
SEGI_04256 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 1.8e-96 356.7 225 73.8
Haze_09774 Corylus avellana HOM05D005997 ORTHO05D008323 5.1e-96 355.1 299 62.9
A06p03040 Brassica napus HOM05D005997 ORTHO05D008323 8.7e-96 354.4 232 70.3
CARHR040570 Cardamine hirsuta HOM05D005997 ORTHO05D008323 5.6e-95 351.7 231 70.6
BcaB07g33491 Brassica carinata HOM05D005997 ORTHO05D008323 7.4e-95 351.3 232 69.8
BcaC08g43226 Brassica carinata HOM05D005997 ORTHO05D008323 2.8e-94 349.4 251 65.7
C06p05740 Brassica napus HOM05D005997 ORTHO05D008323 2.8e-94 349.4 251 65.7
BolC6t35684H Brassica oleracea HOM05D005997 ORTHO05D008323 2.8e-94 349.4 251 65.7
Lsat_1_v5_gn_7_114661 Lactuca sativa HOM05D005997 ORTHO05D008323 6.5e-91 338.2 260 66.5
QL08p008622 Quercus lobata HOM05D005997 ORTHO05D008323 9.3e-90 334.3 317 58.4
SMO196G0283 Selaginella moellendorffii HOM05D005997 ORTHO05D008323 1.2e-89 334.0 216 70.4
AagrBONN_evm.TU.Sc2ySwM_362.871 Anthoceros agrestis HOM05D005997 ORTHO05D008323 7.4e-87 324.7 225 68.9
unitig_899.g15278 Utricularia gibba HOM05D005997 ORTHO05D008323 2.1e-86 323.2 192 76.0
Atru.BG.132.p Acer truncatum HOM05D005997 ORTHO05D008323 6.3e-86 321.6 174 87.4
MELO3C024895.2 Cucumis melo HOM05D005997 ORTHO05D008323 1.8e-85 320.1 241 66.4
Cpa.g.sc12.206 Carica papaya HOM05D005997 ORTHO05D008323 1.2e-84 317.4 262 63.4
PGR031G3624 Punica granatum HOM05D005997 ORTHO05D008323 5.9e-84 315.1 186 79.0
Peaxi162Scf00047g00845 Petunia axillaris HOM05D005997 ORTHO05D008323 1.7e-83 313.5 226 66.8
AUR62015935 Chenopodium quinoa HOM05D005997 ORTHO05D008323 2.7e-81 306.2 290 56.2
AUR62040674 Chenopodium quinoa HOM05D005997 ORTHO05D008323 3.0e-80 302.8 293 56.0
vmacro11568 Vaccinium macrocarpon HOM05D005997 ORTHO05D008323 6.7e-80 301.6 249 61.8
Psat5g171680 Pisum sativum HOM05D005997 ORTHO05D008323 4.3e-79 298.9 193 73.6
PSO302G0218 Papaver somniferum HOM05D005997 ORTHO05D008323 7.4e-79 298.1 285 55.8
CDE07G1873 Ceratophyllum demersum HOM05D005997 ORTHO05D008323 9.0e-77 291.2 204 69.1
Pp3c14_23810 Physcomitrium patens HOM05D005997 ORTHO05D008323 1.2e-76 290.8 218 61.9
Glyma.18G084600 Glycine max HOM05D005997 ORTHO05D008323 3.6e-65 252.7 245 56.3
Dinv10299 Davidia involucrata HOM05D005997 ORTHO05D008323 1.2e-60 237.7 174 67.8
MCO09G728 Micromonas commoda HOM05D004293 ORTHO05D005044 1.4e-53 214.2 221 46.6
MCO11G065 Micromonas commoda HOM05D004293 ORTHO05D005044 9.1e-53 211.5 219 46.6
arahy.Tifrunner.gnm1.ann1.D6FGWZ Arachis hypogaea HOM05D005997 ORTHO05D008323 1.3e-51 207.6 150 68.0
CSS0025804 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 5.0e-51 205.7 172 63.4
CSS0016170 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.9e-50 203.8 123 76.4
HPP92_007350 Vanilla planifolia HOM05D005997 ORTHO05D008323 1.9e-50 203.8 160 63.1
CSS0047434 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 2.5e-50 203.4 123 76.4
Cre01.g039850 Chlamydomonas reinhardtii HOM05D005997 ORTHO05D005044 4.2e-50 202.6 226 45.1
PRCOL_00002636 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 3.0e-48 196.4 224 48.2
PRCOL_00000116 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 4.1e-45 186.0 216 43.5
Cfa020073 Carpinus fangiana HOM05D005997 ORTHO05D008323 5.4e-45 185.7 115 76.5
Atru.chr7.2351 Acer truncatum HOM05D005997 ORTHO05D008323 4.7e-41 172.6 126 69.0
Atru.chr7.2230 Acer truncatum HOM05D005997 ORTHO05D008323 8.0e-41 171.8 97 83.5
Aqoxy1G04027 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 1.4e-37 161.0 106 71.7
QL08p004262 Quercus lobata HOM05D005997 ORTHO05D008323 1.3e-30 137.9 135 57.8
QL08p058329 Quercus lobata HOM05D005997 ORTHO05D008323 1.3e-30 137.9 135 57.8
Prupe.4G230300 Prunus persica HOM05D005997 ORTHO05D008323 1.7e-30 137.5 106 65.1
QL05p025044 Quercus lobata HOM05D005997 ORTHO05D008323 2.5e-26 123.6 156 48.7
CSS0048391 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 3.3e-26 123.2 79 74.7
SEGI_34153 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 2.9e-22 110.2 61 83.6
CSS0044071 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 3.0e-19 100.1 56 83.9
QL08p004281 Quercus lobata HOM05D005997 ORTHO05D007626 8.1e-17 92.0 123 46.3
CSS0025137 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 2.3e-16 90.5 50 84.0
QL08p058354 Quercus lobata HOM05D005997 ORTHO05D007626 2.0e-15 87.4 131 43.5
Rhsim03G0100400 Rhododendron simsii HOM05D005997 ORTHO05D338268 2.4e-13 80.5 92 50.0
QL08p004325 Quercus lobata HOM05D005997 ORTHO05D337094 5.4e-13 79.3 105 46.7
QL11p054366 Quercus lobata HOM05D005997 ORTHO05D338109 5.4e-13 79.3 105 46.7
Lsat_1_v5_gn_8_39280 Lactuca sativa HOM05D005997 ORTHO05D230963 3.6e-09 66.6 48 64.6
arahy.Tifrunner.gnm1.ann1.U3B0HF Arachis hypogaea HOM05D003842 ORTHO05D026908 2.0e-07 60.8 36 77.8
Dinv12329 Davidia involucrata HOM05D000450 ORTHO05D000327 2.2e-06 57.4 175 27.4
QL08p004656 Quercus lobata HOM05D005997 ORTHO05D337365 2.2e-06 57.4 35 71.4
BcaB03g11784 Brassica carinata HOM05D000450 ORTHO05D000327 4.9e-06 56.2 178 27.5
Prupe.6G236000 Prunus persica HOM05D000450 ORTHO05D000327 6.4e-06 55.8 175 28.0
Eucgr.A01146 Eucalyptus grandis HOM05D000450 ORTHO05D000327 8.4e-06 55.5 177 27.7
Peaxi162Scf00211g01733 Petunia axillaris HOM05D000450 ORTHO05D000327 8.4e-06 55.5 175 28.6


User provided reference genes

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