Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G044200 Populus trichocarpa HOM05D005755 ORTHO05D007006 4.3e-56 221.1 111 100.0
Sabra08G0030600 Salix brachista HOM05D005755 ORTHO05D007006 9.9e-53 209.9 109 95.4
Potri.010G217300 Populus trichocarpa HOM05D005755 ORTHO05D007006 6.4e-44 180.6 104 84.6
Duzib106G1131 Durio zibethinus HOM05D005755 ORTHO05D007006 7.3e-40 167.2 110 74.5
Thecc.10G068000 Theobroma cacao HOM05D005755 ORTHO05D007006 7.3e-40 167.2 110 74.5
Ciclev10033129m.g Citrus clementina HOM05D005755 ORTHO05D007006 2.1e-39 165.6 111 73.0
Hund18453 Selenicereus undatus HOM05D005755 ORTHO05D007006 2.1e-39 165.6 111 74.8
GSVIVG01016339001 Vitis vinifera HOM05D005755 ORTHO05D007006 2.8e-39 165.2 111 73.9
Nn5g30302 Nelumbo nucifera HOM05D005755 ORTHO05D007006 3.6e-39 164.9 111 73.9
Atru.chr12.636 Acer truncatum HOM05D005755 ORTHO05D007006 6.2e-39 164.1 109 72.5
HPP92_016041 Vanilla planifolia HOM05D005755 ORTHO05D007006 1.1e-38 163.3 111 70.3
Sc05g0001890 Simmondsia chinensis HOM05D005755 ORTHO05D007006 1.4e-38 162.9 111 73.0
Dinv04676 Davidia involucrata HOM05D005755 ORTHO05D007006 1.8e-38 162.5 110 72.7
Eucgr.G02800 Eucalyptus grandis HOM05D005755 ORTHO05D007006 1.8e-38 162.5 111 69.4
Manes.10G042600 Manihot esculenta HOM05D005755 ORTHO05D007006 1.8e-38 162.5 109 72.5
Duzib114G0063 Durio zibethinus HOM05D005755 ORTHO05D007006 4.0e-38 161.4 110 71.8
TWI15G0398 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 9.0e-38 160.2 109 71.6
Prupe.2G218600 Prunus persica HOM05D005755 ORTHO05D007006 1.2e-37 159.8 111 68.5
TAR381G1573 Trochodendron aralioides HOM05D005755 ORTHO05D007006 1.2e-37 159.8 111 70.3
DCAR_015273 Daucus carota HOM05D005755 ORTHO05D007006 1.5e-37 159.5 110 71.8
FvH4_7g20160 Fragaria vesca HOM05D005755 ORTHO05D007006 1.5e-37 159.5 111 70.3
CiPaw.15G145100 Carya illinoinensis HOM05D005755 ORTHO05D007006 2.0e-37 159.1 111 71.2
Dinv11808 Davidia involucrata HOM05D005755 ORTHO05D007006 3.4e-37 158.3 110 70.9
Cpa.g.sc53.20 Carica papaya HOM05D005755 ORTHO05D007006 7.6e-37 157.1 100 76.0
FAN10G3796 Fragaria x ananassa HOM05D005755 ORTHO05D007006 7.6e-37 157.1 111 69.4
Lalb_Chr07g0186081 Lupinus albus HOM05D005755 ORTHO05D007006 7.6e-37 157.1 113 69.9
CANSAT11G0923 Cannabis sativa HOM05D005755 ORTHO05D007006 9.9e-37 156.8 111 69.4
Glyma.05G164400 Glycine max HOM05D005755 ORTHO05D007006 9.9e-37 156.8 111 70.3
MBI19_g25006_MAGBIO Magnolia biondii HOM05D005755 ORTHO05D007006 9.9e-37 156.8 111 70.3
AUR62037483 Chenopodium quinoa HOM05D005755 ORTHO05D007006 1.3e-36 156.4 104 75.0
AUR62004768 Chenopodium quinoa HOM05D005755 ORTHO05D007006 1.7e-36 156.0 109 71.6
EL10Ac3g06003 Beta vulgaris HOM05D005755 ORTHO05D007006 2.2e-36 155.6 109 70.6
CDE10G1261 Ceratophyllum demersum HOM05D005755 ORTHO05D007006 2.2e-36 155.6 111 68.5
TWI38G1562 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 2.9e-36 155.2 108 68.5
vmacro04890 Vaccinium macrocarpon HOM05D005755 ORTHO05D007006 2.9e-36 155.2 111 69.4
Glyma.08G121800 Glycine max HOM05D005755 ORTHO05D007006 3.8e-36 154.8 111 70.3
MD07G1179300 Malus domestica HOM05D005755 ORTHO05D007006 3.8e-36 154.8 111 68.5
RcHm_v2.0_Chr1g0364121 Rosa chinensis HOM05D005755 ORTHO05D007006 4.9e-36 154.5 111 67.6
THA.LOC104799357 Tarenaya hassleriana HOM05D005755 ORTHO05D007006 4.9e-36 154.5 111 67.6
Aqoxy3G01116 Aquilegia oxysepala HOM05D005755 ORTHO05D007006 8.4e-36 153.7 109 69.7
EL10Ac6g13227 Beta vulgaris HOM05D005755 ORTHO05D007006 8.4e-36 153.7 109 69.7
EL10Ac7g15953 Beta vulgaris HOM05D005755 ORTHO05D007006 8.4e-36 153.7 109 70.6
Cfa019629 Carpinus fangiana HOM05D005755 ORTHO05D007006 8.4e-36 153.7 109 68.8
CSS0044562 Camellia sinensis var. sinensis HOM05D005755 ORTHO05D007006 1.1e-35 153.3 108 70.4
FAN06G3582 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.1e-35 153.3 109 67.0
TPR.G12499 Trifolium pratense HOM05D005755 ORTHO05D007006 1.1e-35 153.3 109 68.8
QL08p056843 Quercus lobata HOM05D005755 ORTHO05D007006 1.9e-35 152.5 109 68.8
Gohir.A01G133200 Gossypium hirsutum HOM05D005755 ORTHO05D007006 2.4e-35 152.1 110 67.3
Gorai.002G143500 Gossypium raimondii HOM05D005755 ORTHO05D007006 2.4e-35 152.1 110 67.3
Hma1.2p1_0157F.1_g068960 Hydrangea macrophylla HOM05D005755 ORTHO05D007006 2.4e-35 152.1 110 70.9
Ah.04g160050 Amaranthus hybridus HOM05D005755 ORTHO05D007006 3.2e-35 151.8 107 70.1
PGR142G0594 Punica granatum HOM05D005755 ORTHO05D007006 3.2e-35 151.8 111 66.7
Ca_19066_v3 Cicer arietinum L. HOM05D005755 ORTHO05D007006 4.2e-35 151.4 109 69.7
FAN01G0677 Fragaria x ananassa HOM05D005755 ORTHO05D007006 5.4e-35 151.0 111 66.7
MD01G1131200 Malus domestica HOM05D005755 ORTHO05D007006 9.3e-35 150.2 111 65.8
CsaV3_3G030820 Cucumis sativus L. HOM05D005755 ORTHO05D007006 1.2e-34 149.8 111 66.7
Sed0018161 Sechium edule HOM05D005755 ORTHO05D007006 1.6e-34 149.4 111 65.8
Phvul.002G244400 Phaseolus vulgaris HOM05D005755 ORTHO05D007006 2.1e-34 149.1 111 66.7
Lsat_1_v5_gn_2_46180 Lactuca sativa HOM05D005755 ORTHO05D007006 4.6e-34 147.9 109 66.1
ATR1096G048 Amborella trichopoda HOM05D005755 ORTHO05D007006 1.0e-33 146.7 106 64.2
FAN03G2322 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.3e-33 146.4 106 67.0
arahy.Tifrunner.gnm1.ann1.FL0JYU Arachis hypogaea HOM05D005755 ORTHO05D007006 1.8e-33 146.0 107 68.2
arahy.Tifrunner.gnm1.ann1.QA5RE0 Arachis hypogaea HOM05D005755 ORTHO05D007006 1.8e-33 146.0 107 68.2
Cc00_g19060 Coffea canephora HOM05D005755 ORTHO05D007006 2.3e-33 145.6 114 67.5
Psat1g119080 Pisum sativum HOM05D005755 ORTHO05D007006 2.3e-33 145.6 109 65.1
EL10Ac7g17935 Beta vulgaris HOM05D005755 ORTHO05D007006 3.0e-33 145.2 99 71.7
Medtr6g068850 Medicago truncatula HOM05D005755 ORTHO05D007006 3.0e-33 145.2 109 64.2
ECA238G0308 Erigeron canadensis HOM05D005755 ORTHO05D007006 3.9e-33 144.8 108 67.6
Lj4g0006534 Lotus japonicus HOM05D005755 ORTHO05D007006 6.7e-33 144.1 111 64.9
Peaxi162Scf00373g00210 Petunia axillaris HOM05D005755 ORTHO05D007006 6.7e-33 144.1 102 68.6
Peaxi162Scf00111g00718 Petunia axillaris HOM05D005755 ORTHO05D007006 2.5e-32 142.1 105 67.6
Actinidia38859 Actinidia chinensis HOM05D005755 ORTHO05D007006 3.3e-32 141.7 111 65.8
PSO675G6920 Papaver somniferum HOM05D005755 ORTHO05D007006 3.3e-32 141.7 104 62.5
Aa31LG7G12880 Aethionema arabicum HOM05D005755 ORTHO05D007006 5.6e-32 141.0 110 64.5
Gohir.D01G118000 Gossypium hirsutum HOM05D005755 ORTHO05D007006 5.6e-32 141.0 128 57.8
MSTRG.8164 Avicennia marina HOM05D005755 ORTHO05D007006 9.6e-32 140.2 104 71.2
EL10Ac5g11654 Beta vulgaris HOM05D005755 ORTHO05D007006 9.6e-32 140.2 95 73.7
Rhsim09G0154200 Rhododendron simsii HOM05D001639 ORTHO05D004140 2.1e-31 139.0 136 55.9
AT5G51960 Arabidopsis thaliana HOM05D005755 ORTHO05D007006 2.8e-31 138.7 111 60.4
CARHR264900 Cardamine hirsuta HOM05D005755 ORTHO05D007006 2.8e-31 138.7 111 60.4
Sp6g14210 Schrenkiella parvula HOM05D005755 ORTHO05D007006 4.8e-31 137.9 111 60.4
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 6.2e-31 137.5 106 66.0
AL8G32330 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 1.4e-30 136.3 111 59.5
Thhalv10015092m.g Eutrema salsugineum HOM05D005755 ORTHO05D007006 1.4e-30 136.3 111 61.3
Sopen04g020610 Solanum pennellii HOM05D005755 ORTHO05D007006 1.4e-30 136.3 102 65.7
Nitab4.5_0001721g0080 Nicotiana tabacum HOM05D005755 ORTHO05D007006 1.8e-30 136.0 112 62.5
BcaB08g35550 Brassica carinata HOM05D005755 ORTHO05D007006 2.4e-30 135.6 105 61.9
VMungo0251G2378 Vigna mungo HOM05D001210 ORTHO05D001036 2.4e-30 135.6 106 65.1
Oeu017232.1 Olea europaea HOM05D005755 ORTHO05D007006 3.1e-30 135.2 99 68.7
Oeu057236.1 Olea europaea HOM05D005755 ORTHO05D007006 3.1e-30 135.2 99 68.7
Solyc04g049970.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 6.9e-30 134.0 101 65.3
Nitab4.5_0000061g0170 Nicotiana tabacum HOM05D005755 ORTHO05D007006 9.0e-30 133.7 112 61.6
SEGI_41538 Sequoiadendron giganteum HOM05D005755 ORTHO05D007006 9.0e-30 133.7 104 61.5
Migut.F01798 Erythranthe guttata HOM05D005755 ORTHO05D007006 1.2e-29 133.3 104 65.4
AL8G26290 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 1.5e-29 132.9 109 58.7
Sopen07g033930 Solanum pennellii HOM05D005755 ORTHO05D007006 1.5e-29 132.9 102 61.8
Solyc07g065720.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 2.6e-29 132.1 101 62.4
PGSC0003DMG400022164 Solanum tuberosum HOM05D005755 ORTHO05D007006 2.6e-29 132.1 102 61.8
Carub.0008s1205 Capsella rubella HOM05D005755 ORTHO05D007006 4.5e-29 131.3 109 59.6
CAN.G79.77 Capsicum annuum HOM05D005755 ORTHO05D007006 4.5e-29 131.3 102 63.7
BcaC03g14561 Brassica carinata HOM05D005755 ORTHO05D007006 1.3e-28 129.8 110 58.2
C02p20090 Brassica napus HOM05D005755 ORTHO05D007006 1.3e-28 129.8 110 58.2
BraA02t06267Z Brassica rapa HOM05D005755 ORTHO05D007006 1.3e-28 129.8 104 60.6
BraA10t43055Z Brassica rapa HOM05D005755 ORTHO05D007006 1.3e-28 129.8 105 60.0
BolC2t08139H Brassica oleracea HOM05D005755 ORTHO05D007006 1.7e-28 129.4 110 58.2
A10p09750 Brassica napus HOM05D005755 ORTHO05D007006 2.9e-28 128.6 105 59.0
SalBow1G5334 Salvia bowleyana HOM05D005755 ORTHO05D007006 2.9e-28 128.6 102 65.7
SalBow1G7067 Salvia bowleyana HOM05D005755 ORTHO05D007006 2.9e-28 128.6 102 65.7
SalBow3G2244 Salvia bowleyana HOM05D005755 ORTHO05D007006 8.4e-28 127.1 102 64.7
SalBow3G3619 Salvia bowleyana HOM05D005755 ORTHO05D007006 8.4e-28 127.1 102 64.7
BcaC04g20616 Brassica carinata HOM05D005755 ORTHO05D007006 1.4e-27 126.3 105 58.1
C09p41470 Brassica napus HOM05D005755 ORTHO05D007006 1.4e-27 126.3 105 58.1
BolC9t57024H Brassica oleracea HOM05D005755 ORTHO05D007006 1.4e-27 126.3 105 58.1
BcaB05g23952 Brassica carinata HOM05D005755 ORTHO05D007006 2.4e-27 125.6 104 56.7
unitig_8.g3685 Utricularia gibba HOM05D005755 ORTHO05D007006 5.5e-27 124.4 104 66.3
Zm00001eb235420 Zea mays HOM05D005755 ORTHO05D007006 2.1e-26 122.5 104 59.6
SGA_v2.0_scaffold71G24037 Striga asiatica HOM05D005755 ORTHO05D007006 3.0e-25 118.6 103 61.2
Os11g0133900 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 1.5e-24 116.3 99 57.6
Zm00001eb163500 Zea mays HOM05D005755 ORTHO05D007006 2.1e-23 112.5 104 55.8
Glyma.19G087500 Glycine max HOM05D005755 ORTHO05D007006 2.8e-23 112.1 111 55.9
AagrBONN_evm.TU.Sc2ySwM_362.2659 Anthoceros agrestis HOM05D005755 ORTHO05D007006 1.4e-19 99.8 101 45.5
Mapoly0006s0175 Marchantia polymorpha HOM05D005755 ORTHO05D007006 1.9e-19 99.4 102 45.1
TPR.G31353 Trifolium pratense HOM05D005755 ORTHO05D007006 1.9e-19 99.4 95 56.8
SMO207G0003 Selaginella moellendorffii HOM05D005755 ORTHO05D007006 2.5e-19 99.0 98 52.0
Os12g0131266 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 5.5e-19 97.8 81 59.3
Haze_18895 Corylus avellana HOM05D005755 ORTHO05D007006 2.7e-18 95.5 86 55.8
Lj3g0006677 Lotus japonicus HOM05D005755 ORTHO05D007006 5.1e-17 91.3 74 60.8
Pp3c3_10790 Physcomitrium patens HOM05D005755 ORTHO05D007006 4.3e-16 88.2 99 42.4
Lj3g0023846 Lotus japonicus HOM05D005755 ORTHO05D007006 1.6e-15 86.3 73 58.9
HanXRQChr14g0436521 Helianthus annuus HOM05D005755 ORTHO05D007006 6.3e-15 84.3 72 51.4
Oeu057237.1 Olea europaea HOM05D005755 ORTHO05D007006 2.0e-13 79.3 65 60.0
AL792U10010 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 4.5e-13 78.2 73 50.7
A02p12030 Brassica napus HOM05D005755 ORTHO05D007006 9.4e-11 70.5 68 48.5
Prupe.2G218400 Prunus persica HOM05D005755 ORTHO05D007006 6.1e-10 67.8 117 42.7
SEGI_15077 Sequoiadendron giganteum HOM05D002017 ORTHO05D007006 1.4e-09 66.6 62 53.2
ClCG08G001190 Citrullus lanatus HOM05D005755 ORTHO05D007006 1.3e-07 60.1 60 48.3
CBR_g23899 Chara braunii HOM05D005755 ORTHO05D007006 4.8e-07 58.2 96 34.4


User provided reference genes

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